Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Sinhcaf
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name SIN3-HDAC complex associated factor
Also known as Fam60a
Coordinate chr4:183401314-183426439
Strand -
Gene summary Predicted to be involved in negative regulation of cell differentiation; negative regulation of cell migration; and positive regulation of cell population proliferation. Predicted to be part of Sin3 complex. Orthologous to human SINHCAF (SIN3-HDAC complex associated factor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Sinhcaf

Retroname Coord Strand Genomic Region ENSG
Fam60aP1 chr11:7398645-7400329 - Intragenic
 N/A UCSC
Fam60aP4 chrX:119838117-119840329 + Intergenic
 N/A UCSC
Fam60aP2 chr15:79887079-79890775 + Intergenic
 N/A UCSC
Fam60aP3 chr16:18453287-18457950 + Intergenic
 N/A UCSC
Fam60aP5 chrX:45669276-45670940 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001134711.1
CTGCGTCCTTAGTGCCTTGTAAAGCTGTCCTCACTCTCTGTTCTGTAATATCTGCAGTGGAGTGGATTGTCTAACAGCTTTGAACCAGAAGAAAAGATGTTTGGTTTTCACAAGCCAAAGATGTACCGAAGTATAGAAGGCTGCTGTATCTGCAGAGCCAAGTCCTCCAGCTCTCGGTTCACGGACAGCAAGCGCTATGAGAAGGACTTCCAGAGCTGCTTTGGGCTGCATGAGACTCGCTCAGGAGACATCTGCAACGCCTGTGTGCTGCTTGTGAAAAGATGGAAGAAGCTGCCGGCAGGATCCAAAAAAAACTGGAATCACGTCGTAGATGCAAGAGCAGGCCCCAGTCTAAAGACAACACTGAAACCAAAGAAAGTGAAGACTCTGTCTGGAAACAGGATGAAAAGCAGCCAGATCAGTAAGCTGCAGAAGGAGTTTAAACGCCACAATTCTGATGCTCATAGCACCACCTCAAGTGCCTCTCCAGCCCAGTCTCCATGCTATAGTAACCAGTCAGACGAGGGCTCAGATACAGAGATGGCTTCCAGCTCTAATAGAACTCCGGTTTTTTCCTTCTTAGATCTTACCTACTGGAAAAGACAGAAAATATGTTGTGGGATCATCTATAAGGGCCGTTTTGGGGAAGTCCTCATCGACACTCATCTCTTCAAGCCTTGCTGCAGCAGTAAGAAAGCTGCTGCCGAGAAGCCAGAGGAGCAGGCCCCAGCGCCTCTGCCCATCTCCACTCAGGAGTGGTGACTGAGGTTCATTTAGAAGGGAGCGAAGAACGATTTAAACTTTGAAAAGACCACAAAACAAACTGACCCTCCTATTTTTAACTTGGATACCTGCTATTCTGCCAAAAGACATTTTCTAGAATAGTTTTTAATGGGTTACTATCCTTACCCTTCACCCAACCAACTCTGAAGCCAGTCTCTAGCTTACTGCAAGAAAAGACGTGTACATACTATTTAAGATGCTGAGTATCTCATAGGAAAGCTGAATGCTGCTGTAAAGTGCTCTTTAAGTCTTTTAAAATCCCCTCTAATGAATGGAATAGGGGAACTTCAGGGGACAGAGATGGGATTTGTTGTGTGATAAACCATATGTAGTTTAGTCTTTCTGTGGAGAGGCAGTGGTTGGGGCATTTTTAAATGGCTGGCTACACTTCTTTTCCCTCATGATAATTTGTCATAACTCAGTAGCATGACCTGTCCCTAGAAGGTAGTTAAAATTTTTTACATGCTAAGGCGTTGCCAAGGTTCTGATGATTCAGACCTGTACTACTGATTATTAAGCAGGACAGACTGAGCTTTCTGCAAATAGCTTGAAGGAGGAAGCAATTTCTGAGCACACAAGTAGCACCGTGTCGCCTCCCCTTATCTTCACATTGATAAAAGACTTTATGTGGATCTCGTAAAACAGAACCAGATCTCCTTTGGGGAAGGCCTGCCTCTAGGATGGGCAAGGTCCTGTAGGGATAGAACCAAAAGCATCACCACAAAGTAGAGACACAATGTGGTTAGAAACTACTTAATCAGAATGGCTAAGTCGCTGGGGCGCATGGACACAGTTAGTTGATGCTGCTTGGGGCGTGTCCTCCTAGAGGGCTCACAGTATGTAAATAATTGACATTGGTGTTAACACGACTGTCTGGGATTCACTGAAATCCACATGATTCAGTTCTAGCTCTGGATTACCTCAGTTGAACCTTTGTGGAGGGTTTTATCTGTAGAGTAGCTCTTTGCCTTGTCATAAAACCTTATTAGGGTTTGGGGTTCTGTTGTTTTGTTTTGCTCTCCCACTATTTAAAGCGTGACTAGAAGGGTTAGTTGTGTGTTGAGGCTAAGTTGGGTGGTTGGGTCGGCTTCTTAACATTAAGATAGCTGAGTGGAGCTCCACACCTGGATCTCAATGACTCGGTTGGCTTCTCAGTGGAACCCAACTGAGGTTGTCTAATCGCCTCTTCTCAAAAGTTCAGGAAAAAGAGTAGTGCCACGTGAGACCTCACAGAGGAGGTGTACGTGGCTGCCTTAGTATTCTGTTGCTCATGATTATTTTAGAAACTGGATTTTTAAAGACTTTTAGAGTTTCATAACAAGGAAAAGCCACAGTTTGTGTCATCCTACAGTTTTACATCGTGTATTTCTTCCTTTTAGAAAAAACCTACCTAGTACAAGGTACCACATGCACAGACTGCCCAGTGAATGGGTCAATTCTCCACAGCCCTGGTGTAGTGCAGAGTCCAGTCATTACCATTCTCCTGCGTTACTTTGACATGGGATTTTTTTTTTTTTTTGTACATTTTGGCTGCAGTATTGGTGGTAGAATATACTTTGATGGATCATCTCtacttctgtatttatttatttattACTAGACCTCAACCACAGCCTTCTCCCCCTCCACTCTCTGCCTGTAGGATGTACTGTATGTAGTCATGCACTTTGTATTAATATATTAGAAATCTACAGATCTGTTTTGTACTTTTTATACTGTTGGATACTTATAATCAAAACTTTACTCTAGGGTATTGAATAAATTTAGTCTTATTAGAAAA
>NM_001134712.1
CAACTGAAGAACTGCTGGAGACAATCTTTCTGGACTCGGCGCTGGCGGAGGGAGTGCTTGCAGGGGGTTGGCCTGGTGCAGTTTGCACCGTGGGGACGCTGCTGCGCGTGGAAGCTTTGAACCAGAAGAAAAGATGTTTGGTTTTCACAAGCCAAAGATGTACCGAAGTATAGAAGGCTGCTGTATCTGCAGAGCCAAGTCCTCCAGCTCTCGGTTCACGGACAGCAAGCGCTATGAGAAGGACTTCCAGAGCTGCTTTGGGCTGCATGAGACTCGCTCAGGAGACATCTGCAACGCCTGTGTGCTGCTTGTGAAAAGATGGAAGAAGCTGCCGGCAGGATCCAAAAAAAACTGGAATCACGTCGTAGATGCAAGAGCAGGCCCCAGTCTAAAGACAACACTGAAACCAAAGAAAGTGAAGACTCTGTCTGGAAACAGGATGAAAAGCAGCCAGATCAGTAAGCTGCAGAAGGAGTTTAAACGCCACAATTCTGATGCTCATAGCACCACCTCAAGTGCCTCTCCAGCCCAGTCTCCATGCTATAGTAACCAGTCAGACGAGGGCTCAGATACAGAGATGGCTTCCAGCTCTAATAGAACTCCGGTTTTTTCCTTCTTAGATCTTACCTACTGGAAAAGACAGAAAATATGTTGTGGGATCATCTATAAGGGCCGTTTTGGGGAAGTCCTCATCGACACTCATCTCTTCAAGCCTTGCTGCAGCAGTAAGAAAGCTGCTGCCGAGAAGCCAGAGGAGCAGGCCCCAGCGCCTCTGCCCATCTCCACTCAGGAGTGGTGACTGAGGTTCATTTAGAAGGGAGCGAAGAACGATTTAAACTTTGAAAAGACCACAAAACAAACTGACCCTCCTATTTTTAACTTGGATACCTGCTATTCTGCCAAAAGACATTTTCTAGAATAGTTTTTAATGGGTTACTATCCTTACCCTTCACCCAACCAACTCTGAAGCCAGTCTCTAGCTTACTGCAAGAAAAGACGTGTACATACTATTTAAGATGCTGAGTATCTCATAGGAAAGCTGAATGCTGCTGTAAAGTGCTCTTTAAGTCTTTTAAAATCCCCTCTAATGAATGGAATAGGGGAACTTCAGGGGACAGAGATGGGATTTGTTGTGTGATAAACCATATGTAGTTTAGTCTTTCTGTGGAGAGGCAGTGGTTGGGGCATTTTTAAATGGCTGGCTACACTTCTTTTCCCTCATGATAATTTGTCATAACTCAGTAGCATGACCTGTCCCTAGAAGGTAGTTAAAATTTTTTACATGCTAAGGCGTTGCCAAGGTTCTGATGATTCAGACCTGTACTACTGATTATTAAGCAGGACAGACTGAGCTTTCTGCAAATAGCTTGAAGGAGGAAGCAATTTCTGAGCACACAAGTAGCACCGTGTCGCCTCCCCTTATCTTCACATTGATAAAAGACTTTATGTGGATCTCGTAAAACAGAACCAGATCTCCTTTGGGGAAGGCCTGCCTCTAGGATGGGCAAGGTCCTGTAGGGATAGAACCAAAAGCATCACCACAAAGTAGAGACACAATGTGGTTAGAAACTACTTAATCAGAATGGCTAAGTCGCTGGGGCGCATGGACACAGTTAGTTGATGCTGCTTGGGGCGTGTCCTCCTAGAGGGCTCACAGTATGTAAATAATTGACATTGGTGTTAACACGACTGTCTGGGATTCACTGAAATCCACATGATTCAGTTCTAGCTCTGGATTACCTCAGTTGAACCTTTGTGGAGGGTTTTATCTGTAGAGTAGCTCTTTGCCTTGTCATAAAACCTTATTAGGGTTTGGGGTTCTGTTGTTTTGTTTTGCTCTCCCACTATTTAAAGCGTGACTAGAAGGGTTAGTTGTGTGTTGAGGCTAAGTTGGGTGGTTGGGTCGGCTTCTTAACATTAAGATAGCTGAGTGGAGCTCCACACCTGGATCTCAATGACTCGGTTGGCTTCTCAGTGGAACCCAACTGAGGTTGTCTAATCGCCTCTTCTCAAAAGTTCAGGAAAAAGAGTAGTGCCACGTGAGACCTCACAGAGGAGGTGTACGTGGCTGCCTTAGTATTCTGTTGCTCATGATTATTTTAGAAACTGGATTTTTAAAGACTTTTAGAGTTTCATAACAAGGAAAAGCCACAGTTTGTGTCATCCTACAGTTTTACATCGTGTATTTCTTCCTTTTAGAAAAAACCTACCTAGTACAAGGTACCACATGCACAGACTGCCCAGTGAATGGGTCAATTCTCCACAGCCCTGGTGTAGTGCAGAGTCCAGTCATTACCATTCTCCTGCGTTACTTTGACATGGGATTTTTTTTTTTTTTTGTACATTTTGGCTGCAGTATTGGTGGTAGAATATACTTTGATGGATCATCTCtacttctgtatttatttatttattACTAGACCTCAACCACAGCCTTCTCCCCCTCCACTCTCTGCCTGTAGGATGTACTGTATGTAGTCATGCACTTTGTATTAATATATTAGAAATCTACAGATCTGTTTTGTACTTTTTATACTGTTGGATACTTATAATCAAAACTTTACTCTAGGGTATTGAATAAATTTAGTCTTATTAGAAAA