Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Smtnl1
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name smoothelin-like 1
Also known as 1110030K22Rik|CHASM
Coordinate chr2:84641494-84657173
Strand -
Gene summary Enables several functions, including calmodulin binding activity; protein domain specific binding activity; and protein phosphatase 1 binding activity. Involved in negative regulation of transcription, DNA-templated. Acts upstream of or within several processes, including blood vessel diameter maintenance; peptidyl-serine phosphorylation; and response to activity. Located in I band; M band; and nucleus. Is expressed in several structures, including aorta; diaphragm; genitourinary system; ileum; and skeletal muscle. Orthologous to human SMTNL1 (smoothelin like 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Smtnl1

Retroname Coord Strand Genomic Region ENSG
Smtnl1P1 chr1:83044846-83045240 + Intergenic
 ENSMUSG00000099691 UCSC

Expression

Transcript Sequences

>NM_024230.2
TTCCCGAAGCCCGGGCCTCTtgaaggtggggtggggtggaagcaAGGAGGTGGGACTTTGAGCTGAAGGCTCCAAGCCACCAGAGCTTAAAGAACGATGAGAGTGAGGCAGCTCGGCTAGAACGAGGCAAGAGCTCCGAGCTGCAGGCAGAACCCCACAGACATGGAGCAGACAGAAGGGAACTCCTCTGAGGATGGGACCACTGTCTCCCCAACTGCAGGGAATCTTGAGACACCAGGAAGTCAAGGCATTGCAGAGGAGGTGGCCGAAGGCACAGTTGGGACAAGTGACAAAGAAGGGCCTTCAGATTGGGCAGAACATTTGTGTAAAGCAGCATCTAAGAGTGGCGAATCAGGGGGGTCCCCAGGGGAAGCAAGTATATTAGATGAGCTCAAGACAGACTTGCAAGGGGAAGCCAGAGGGAAGGACGAAGCCCAGGGTGACCTTGCTGAGGAGAAGGTTGGGAAGGAAGACACCACAGCGGCTTCTCAGGAAGACACTggtaagaaagaagaaacaaaacctgAACCCAATGAAgttagggagaaagaggaggccaTGCTGGCCTCGGAGAAGCAGAAGGTTGATGAGAAAGAGACCAATCTAGAATCTAAGGAGAAATCGGATGTGAATGACAAAGCCAAGCCTGAACCCAAGGAGGATGCTGGAGCAGAGGTTACTGTCAACGAGGCTGAGACTGAGTCTCAGGAGGAGGCTGATGTGAAGGACCAGGCCAAGCCCGAGCTTCCAGAAGTTGATGGGAAAGAGACCGGAAGTGACACAAAGGAGTTGGTGGAGCCAGAGAGTCCCACTGAAGAGCAAGAGCAGGGTAAGGAAAATGAATCAGAAGAAAGGGCTGCAGTGATTCCCAGCTCCCCCGAGGAGTGGCCCGAAAGCCCCACAGATGAGGGGCCCAGCCTCAGCCCAGATGGATTGGCTCCAGAGTCTACAGGAGAGACCAGTCCTTCAGCCAGTGAATCTTCGCCCAGTGAGGTGCCAGGGAGTCCCACAGAGCCTCAACcctcagagaaaaagaaggaTCGAGCACCAGAACGCAGAGTGTCGGCACCCAGCCGGCCCCGGGGGCCCCGTGCACAGAATCGGAAGGCCATCATGGACAAATTTGGCGGGGCAGCCTCTGGCCCCACTGCACTGTTCCGGAACACAAAGGCAGCCGGGGCAGCCATCGGTGGTGTCAAGAACATGCTTTTGGAGTGGTGCCGGGCCATGACGAGAAACTACGAGCACGTGGATATCCAAAACTTCTCCTCCAGCTGGAGCAGCGGCATGGCCTTCTGTGCCCTCATCCACAAGTTTTTTCCAGAAGCCTTTGACTATGCAGAGCTGGACCCAGCAAAGCGCCGGCACAACTTCACCCTAGCTTTCTCGACTGCAGAGAAACTAGCCGACTGTGCCCAGCTGCTGGAGGTGGATGACATGGTGCGGCTGGCAGTGCCCGATTCCAAGTGTGTCTACACCTACATCCAGGAGCTATACCGTAGCCTTGTGCAGAAAGGGCTGGTGAAGACGAAAAAGAAATGAATGGCAAAGCCATGCGGGAGGAGGAAGCGGAGCCCAGCTGCCAACCGTGGCCTCGGGGTGCTTTCGCACCACCAGACATAAAGCAGGTGACACCAGTATCAACCGCACCGAAAGTGCTTTTTCAAAATTCCTCTCATTCCTTGCTGCTCCCCGCACCCCAACCAGCCACACGTATGTTACAGGCGGTGggccaaaaataaaaagaaacctgcATTTGGA