Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ifitm1
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name interferon induced transmembrane protein 1
Also known as 1110036C17Rik|DSPA2a|Mil-2|Mil2
Coordinate chr7:140547342-140549740
Strand +
Gene summary Involved in response to virus. Acts upstream of or within defense response to virus; negative regulation of viral entry into host cell; and somitogenesis. Predicted to be located in early endosome and lysosomal membrane. Predicted to be part of protein-containing complex. Predicted to be active in plasma membrane. Is expressed in several structures, including alimentary system; extraembryonic component; genitourinary system; respiratory system; and sensory organ. Human ortholog(s) of this gene implicated in adenosquamous gallbladder carcinoma and gallbladder adenocarcinoma. Orthologous to human IFITM1 (interferon induced transmembrane protein 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ifitm1

Retroname Coord Strand Genomic Region ENSG
Ifitm1P1 chr8:13946154-13946818 + Intragenic
ENSMUSG00000068631 UCSC
Ifitm1P2 chr16:13801176-13801722 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001112715.1
TTAACTCCGCAGCCCCTAAAAAGCACACCAAATTGTAAACATAAGGAAGTAGGTTTCTGAGAAACAGACCCCACTGGAGGAAAAAGGCCGGCCCACTGCGCAGCAGGCTCCGGACTGCCCAGTTTGAAAAGCCTTCTCATTCCTTCCTTATTCTCACTCTGCAGCTTCAAAAGCCGAGAGATGCCTAAGGAGCAGCAAGAGGTGGTTGTACTGGGGTCACCCCACATCTCAACTTCTGCGACAGCCACCACAATCAACATGCCTGAGATCTCCACGCCTGACCATGTGGTCTGGTCCCTGTTCAATACACTCTTCATGAACTTCTGCTGCCTGGGCTTCGTAGCCTATGCCTACTCCGTGAAGTCTAGGGACAGGAAGATGGTGGGTGATACGACTGGGGCCCAGGCCTTCGCCTCCACCGCCAAGTGCCTGAACATCAGCTCCCTGTTCTTCACCATCCTCACGGCCATCGTCGTCATCGTTGTCTGTGCCATTAGATGATGTGAGATGTCTTGCAACATCTCACAGTAGATAACAGATTCTGGGGCCTCCCAGGCTTGCTATGTGTTTCCTTGTCTATCGCTGCCCCAAACCCTAGACTTAGTCCTGACCATTTGCCCCATACATATGCAAATGTGACACTCACAAATCTGTCCATGGTGGACTCAATAAAGTGCACGTGCTGTGACTTTCTGCCCCTGG