Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name U2af1
Plot displaying the genomic locations of a parental gene (in chr20) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name U2 small nuclear RNA auxiliary factor 1
Also known as -
Coordinate chr20:10396652-10407564
Strand -
Gene summary Predicted to enable RS domain binding activity and pre-mRNA 3'-splice site binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in nuclear speck. Predicted to be part of U2AF complex and catalytic step 2 spliceosome. Orthologous to human U2AF1 (U2 small nuclear RNA auxiliary factor 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from U2af1

Retroname Coord Strand Genomic Region ENSG
U2af1P1 chr9:2822781-2823472 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001044291.1
GTCGGCACAGTCGGCAGCGTCGGCTGCCGTGCCGGAGTCGTCCGCTGGAAAATGGCGGAATACTTGGCCTCCATCTTCGGCACCGAGAAAGACAAAGTCAACTGTTCATTTTATTTCAAAATTGGAGCGTGTCGTCATGGAGACAGATGTTCTCGGTTGCACAATAAACCGACCTTTAGCCAGACCATTGCCCTCTTGAACATTTACCGTAACCCTCAAAACTCTTCCCAGTCTGCTGACGGTTTGCGCTGTGCGGTGAGCGACGTGGAGATGCAGGAGCACTATGACGAGTTCTTTGAGGAAGTCTTCACTGAGATGGAAGAGAAGTACGGGGAGGTCGAGGAGATGAACGTCTGTGACAACCTAGGAGACCACCTGGTGGGGAATGTGTATGTCAAGTTCCGACGTGAGGAGGATGCGGAGAAAGCAGTGATCGACTTGAACAACCGCTGGTTTAATGGGCAGCCAATCCACGCAGAGCTGTCCCCAGTAACTGACTTCAGGGAAGCTTGCTGCCGCCAGTATGAAATGGGGGAGTGCACAAGAGGGGGCTTCTGCAACTTCATGCATCTGAAGCCGATCTCAAGAGAGCTGCGACGGGAGCTGTATGGGCGCCGGCGCAAGAAgcatagatccaggtcccgatccaggGAGCGGCGTTCCCGATCGAGAGACCgtggacgcggtggtggaggtggaggtggaggcggtggaggacgtgagcgtgacaggaggcggtCAAGAGACCGGGAGAGATCTGGGCGATTCTGAGCCGAGCCGTTTTTACCATGTGCTAGACAGTGTTGTAGTTGGTTGGCAAGCCAGTTCATAGTGGGATTTTTTTTTTaaaaaaaaaaaaaaaaaaacaaaGATGGGTTTCTGAATAAAATTTGTAGTGATACAGTA