Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Snrpd3
Plot displaying the genomic locations of a parental gene (in chr20) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name small nuclear ribonucleoprotein D3 polypeptide
Also known as -
Coordinate chr20:14080562-14095644
Strand -
Gene summary Enables U1 snRNP binding activity. Predicted to be involved in spliceosomal snRNP assembly. Predicted to act upstream of or within protein methylation. Located in nucleus. Part of U1 snRNP. Human ortholog(s) of this gene implicated in systemic lupus erythematosus. Orthologous to human SNRPD3 (small nuclear ribonucleoprotein D3 polypeptide). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snrpd3

Retroname Coord Strand Genomic Region ENSG
Snrpd3P1 chr1:51148025-51148426 + Intergenic
 N/A UCSC
Snrpd3P3 chr19:13287406-13287967 + Intergenic
 N/A UCSC
Snrpd3P2 chr6:46547567-46547735 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_003751948.3
GGGCCTGCGCAAGGCATTCTGGGAGCGCGTGGTGTGAGTGATACTCGGGCCCGTCGTTTCCTCGCCTCAAGCCTTCGCCTTCTAACGTTTGTGCCGGGACCGAAAAAAAAAAAAAGCCTGCAGTTAGTTGGAAGAGTCCTGCCAAGATGTCTATCGGTGTGCCAATTAAAGTCCTGCACGAAGCGGAAGGCCACATAGTGACATGTGAGACCAACACTGGTGAAGTGTATCGGGGGAAGCTCATTGAGGCAGAGGACAACATGAACTGCCAGATGTCCAACATCACAGTCACATACAGAGACGGCCGAGTGGCACAGCTGGAACAGGTGTACATACGTGGCAGCAAGATCCGGTTTCTGATTTTGCCTGACATGCTGAAAAATGCACCCATGTTAAAGAGCATGAAAAATAAAAACCAAGGCTCAGGGGCTGGCCGAGGAAAAGCTGCTATCCTGAAGGCCCAAGTGGCTGCAAGAGGAAGAGGACGTGGAATGGGGCGTGGAAACATTTTCCAGAAGCGAAGATAGTGCTCTCCATTGAAGAGAACTTTGTCCTGTCTTCTCTTAGGTTTTTGGGCTTTGGGGGTGGGGCGGGGGGTTATATGTGCATATGTCCTGGGTTTTAATATTTCTCTTTGTATTGGAGAAACTGTTAAGCTAAATAAAAtttggttttgtgttttg
>XM_017601883.1
AGGTCACCGATTTTCGAAGCTTACAGGCAGTCCTTTCTTGCTAGTTATCTCCTTGCCTTCCGGATCTTCGTTTTCAACGTCCTTTTCATCCCTGCGCCACTCCCATTCCTGTACTGGCCTCCCCTCCTGCTTTGCACGCTGCTGCAGACGTTTCAGCAGATTGCTCTGCTATATGTTTAATCCACTTTGTAGATGCTACTAGTTTTTTTTTAAGCCCTTGCCTATAATCCTGTAGTGTTTCCCTACCATTTTCAGCACTCTCCTAAAGTTGAAAGCCGTGGTTCCTCACCATGTTTAGCATCCTTATAGTCTTCTCATGAAAATGGGCCGTGTGCTCCGTCTAGTGTCGTTTCCCGTCTCAGAAATGTAAAAGCCCTGCGCATAGTCTTTGTTTTTTTAATGAGACTTAAGTCGAGCGTTTACCCTATTTCCCTGAATGATGAGCATTTCCTGTTTATAGCATGTTGCCGTGACGCTTTTGGTCTGCTTTTTGGTGGGGAGTCAAAAAGCTAAATTGTAAAGCACAACCTGTTTTCCTGGATTTCTCTGGGTTTAGGTCTCTTtgtactatcagGAAGAGTCCTGCCAAGATGTCTATCGGTGTGCCAATTAAAGTCCTGCACGAAGCGGAAGGCCACATAGTGACATGTGAGACCAACACTGGTGAAGTGTATCGGGGGAAGCTCATTGAGGCAGAGGACAACATGAACTGCCAGATGTCCAACATCACAGTCACATACAGAGACGGCCGAGTGGCACAGCTGGAACAGGTGTACATACGTGGCAGCAAGATCCGGTTTCTGATTTTGCCTGACATGCTGAAAAATGCACCCATGTTAAAGAGCATGAAAAATAAAAACCAAGGCTCAGGGGCTGGCCGAGGAAAAGCTGCTATCCTGAAGGCCCAAGTGGCTGCAAGAGGAAGAGGACGTGGAATGGGGCGTGGAAACATTTTCCAGAAGCGAAGATAGTGCTCTCCATTGAAGAGAACTTTGTCCTGTCTTCTCTTAGGTTTTTGGGCTTTGGGGGTGGGGCGGGGGGTTATATGTGCATATGTCCTGGGTTTTAATATTTCTCTTTGTATTGGAGAAACTGTTAAGCTAAATAAAAtttggttttgtgttttgc