Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl38
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein L38
Also known as -
Coordinate chr10:103198424-103202059
Strand +
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation and ribonucleoprotein complex assembly. Predicted to act upstream of or within several processes, including 90S preribosome assembly; middle ear morphogenesis; and sensory perception of sound. Part of cytosolic large ribosomal subunit. Orthologous to human RPL38 (ribosomal protein L38). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl38

Retroname Coord Strand Genomic Region ENSG
Rpl38P1 chr1:16474842-16475082 - Intergenic
N/A UCSC
Rpl38P3 chr1:88486840-88486977 + Intergenic
N/A UCSC
Rpl38P4 chr2:199479006-199479309 - Intergenic
N/A UCSC
Rpl38P5 chr3:150302990-150303226 - Intergenic
N/A UCSC
Rpl38P6 chr3:164002432-164002735 + Intergenic
N/A UCSC
Rpl38P7 chr3:84860814-84861070 + Intergenic
N/A UCSC
Rpl38P9 chr4:174861979-174862149 - Intragenic
N/A UCSC
Rpl38P10 chr4:59014162-59014465 - Intergenic
N/A UCSC
Rpl38P12 chr6:36087581-36087855 - Intergenic
N/A UCSC
Rpl38P13 chr7:77566509-77566794 - Intergenic
N/A UCSC
Rpl38P15 chr10:4363193-4363437 - Intergenic
N/A UCSC
Rpl38P16 chr10:6785443-6785729 + Intergenic
N/A UCSC
Rpl38P17 chr12:39628579-39628880 + Intragenic
N/A UCSC
Rpl38P18 chr13:101987792-101988005 - Intergenic
N/A UCSC
Rpl38P20 chr15:45844059-45844313 + Intragenic
N/A UCSC
Rpl38P22 chr18:69818720-69818975 + Intergenic
N/A UCSC
Rpl38P23 chrX:74824472-74824759 + Intergenic
N/A UCSC
Rpl38P2 chr1:85308129-85308419 - Intragenic
N/A UCSC
Rpl38P8 chr3:8955288-8955567 - Intergenic
N/A UCSC
Rpl38P11 chr4:62775834-62776082 + Intergenic
N/A UCSC
Rpl38P14 chr8:63119347-63119648 + Intergenic
N/A UCSC
Rpl38P19 chr14:104452884-104453167 + Intergenic
N/A UCSC
Rpl38P21 chr16:11214694-11214997 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001077592.1
GTTGTTCGGTGCTCGCTCCTGTGCTGACGCCAGAGCCGAGCGCCCGTCGCCATGCCTCGGAAAATTGAGGAAATCAAGGACTTTCTACTCACAGCCCGGCGGAAGGATGCCAAATCTGTCAAGATCAAGAAAAACAAGGATAATGTAAAGTTCAAGGTCCGCTGTAGCAGGTACCTCTACACCCTGGTTATCACAGACAAGGAGAAGGCGGAGAAGCTGAAGCAGTCCCTGCCCCCAGGTTTGGCAGTGAAGGAGCTGAAATGAACAGGACCTCTGCATGTGACTATTAAAAACCCTGAAAAGTC
>XM_008768393.1
TGTGAGTTTTTCTGGGCAGGTGCTGACGCCAGAGCCGAGCGCCCGTCGCCATGCCTCGGAAAATTGAGGAAATCAAGGACTTTCTACTCACAGCCCGGCGGAAGGATGCCAAATCTGTCAAGATCAAGAAAAACAAGGATAATGTAAAGTTCAAGGTCCGCTGTAGCAGGTACCTCTACACCCTGGTTATCACAGACAAGGAGAAGGCGGAGAAGCTGAAGCAGTCCCTGCCCCCAGGTTTGGCAGTGAAGGAGCTGAAATGAACAGGACCTCTGCATGTGACTATTAAAAACCCTGAAAAGTC