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Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Mt2A
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name metallothionein 2A
Also known as Mt2
Coordinate chr19:11307966-11308740
Strand -
Gene summary Enables cadmium ion binding activity and zinc ion binding activity. Involved in astrocyte activation. Predicted to be located in cytoplasm and nucleus. Biomarker of Alzheimer's disease; kidney failure; median neuropathy; retinitis pigmentosa; and transient cerebral ischemia. Human ortholog(s) of this gene implicated in carotid stenosis and type 2 diabetes mellitus. Orthologous to several human genes including MT1E (metallothionein 1E); MT1F (metallothionein 1F); and MT1X (metallothionein 1X). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Mt2A

Retroname Coord Strand Genomic Region ENSG
Mt2AP1 chr5:124494835-124495143 + Intragenic
N/A UCSC
Mt2AP2 chr5:98437894-98438193 - Intergenic
N/A UCSC
Mt2AP3 chr6:60363521-60363893 + Intragenic
N/A UCSC
Mt2AP4 chr20:3677473-3677846 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001137564.1
ATCACGCTCCTAGAACTCTACAGCGATCTCTCGTTGATCTCCAACTGCCGCCTCCATTCGCCATGGACCCCAACTGCTCCTGTGCCACAGATGGATCCTGCTCCTGCGCTGGCTCCTGCAAATGCAAACAATGCAAATGCACCTCCTGCAAGAAAAGCTGCTGTTCCTGCTGCCCCGTGGGCTGTGCGAAGTGCTCCCAGGGCTGCATCTGCAAAGAGGCTTCGGACAAGTGCAGCTGCTGCGCCTGAAGTGGGGGCGTCCTCACAATGGTGTAAATAAAACAACGTAGGAACCTAGCCTTTTTTTGTACAACCCTGACCGGTTCTCCACACTTTTTTCTATAAAGCATGTAACTGACAATAAAATAAAAAAACTTGACTTGA