Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Stmp1
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name short transmembrane mitochondrial protein 1
Also known as -
Coordinate chr4:62780596-62790428
Strand +
Gene summary Predicted to be involved in positive regulation of NLRP3 inflammasome complex assembly and positive regulation of interleukin-1 beta production. Predicted to be located in mitochondrial intermembrane space and mitochondrial outer membrane. Predicted to be active in mitochondrial respirasome. Orthologous to human STMP1 (short transmembrane mitochondrial protein 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Stmp1

Retroname Coord Strand Genomic Region ENSG
LOC689574P1 chr8:115816336-115816506 - Intragenic
N/A UCSC
LOC689574P2 chr16:80473139-80473428 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001195504.1
GCGGCGGGTTCCGCCCTCGCGCTGGGGCGGAGTCTCGGAGCAGTGCTGGAGCTGAAGCATCTTTCACACCCTCCTCACCCTCCCCACCGACATCATGCTTCAGTTCCTGCTTGGATTTACTTTGGGCAACGTGGTTGGAATGTATCTGGCCCAGAACTACGACATGCCAAACCTGGCTAAAAAACTTGAAGAGATTAAAAAGGACCTGGAAGCCAAGAAGAAGCCCCCTAGTTCCTGATGCCCACCTGGCACTGTATTCTGGACCCACCAATTCCGTCCCGGGGCCTGCCTTCTTCACAGCCACATCCAAAGCTGTGTTCCTCTTTGGTCTCAGAGCCTGCGAGTTGCCTCAGATCTAACACCGGCCCGAAGTCGAGTTAGCTCTTCGTTTCCAGCATCTCCCCTCCCCCCGTATCTTCTGTCCAGCAGCTTCTGAGTCCTAAGGCTGGAACTAAGGTGCTAGGTCAGCAAACACAACCGTAACTGGTATTCACCTGTGCTCTGAGAGACCCCCGTGGTCAAGGAATGACTGGCTTTGGATAGCCGCTGCATTCACTGTCTAGCAGTGACAGTAGGAGCTTGCTACACAAACCAAATTTTGTTAAAGTAATTAAAATCAGTATCTTCAAGCCAGTTTCTGGTGAATTAATCCATTTGTTATATAATGTTATCAAGGAACTCCACGATTGATAATTTAACCAATAAATTGTTTGCTGGTCATTAACCAAAAAA