Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Kmt5a
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name lysine methyltransferase 5A
Also known as Pr-set7|RGD1305893|Setd8
Coordinate chr12:37558150-37581183
Strand -
Gene summary Predicted to enable histone-lysine N-methyltransferase activity; p53 binding activity; and transcription corepressor activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II; peptidyl-lysine monomethylation; and regulation of DNA damage response, signal transduction by p53 class mediator. Predicted to be located in cytosol and nucleoplasm. Orthologous to human KMT5A (lysine methyltransferase 5A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Kmt5a

Retroname Coord Strand Genomic Region ENSG
Kmt5aP2 chr10:31782018-31784247 + Intragenic
 N/A UCSC
Kmt5aP4 chrX:99389259-99391821 + Intergenic
 N/A UCSC
Kmt5aP1 chr2:148262110-148264689 + Intergenic
 N/A UCSC
Kmt5aP3 chr11:2812086-2813942 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_017598457.1
GGCCTGCTGCGGGCCATGGGCGAAGCGGGCGCCGTGGGGCGCCGCCGGCCCTTTCCCGGGGCGCCGCGGCGGCGCTGGTGGCGGCGGCAGCAGCAGCAGCAGCAGCGGCGGCGGCAGCGCTGGTGGCCGGGCCGCGGCGAGGGCGAGGGCGCCGGCCGTGCCGCCATGGGCCTAGCCGGGCTCCAGGAGAACGTGTTTGCTGGGCAGTCAAAGATCTATGCCTACATGAGTCCGAACAAATGCTCTGGAATGCGTTCTCCACTGCAGGAAGAGAACTCCGTCGCACATCATGAGGTCAAATGCCCGGGGAAACCATTGGCCGGAATCTACAGGAAGCGAGAAGAGAAAAGAAACGCTGGGAATGTTATCCGAAGCGCTGTGAAGTCAGAAGAACAGAAGAGCAAAGATACCAGGAGAGGTCCCCTGGCGCCTTTTCCAAACCAAAAACCTGAAGCAACAGAACCTCCAAAAACTCCACCCCCGTCATGTGATTCTACCAGTGTAGCGGTTGCTAAGCAAGCCCTGAAAAAGCCCCTCAAGGGCAAGCAGGCCCCTCGGAAGAAGTCTCAAGGGAAGACACAGCAGAATAGAAAACTCACAGATTTCTACCCCGTGCGAAGGAGCTCCAGGAAGAGCAAAGCTGAGCTGCAGTCTGAAGAAAGGAAGAAGATAGATGAGCTAATTGAGAGCGGGAAGGAAGAGGGCATGAAGATTGATCTAATCGATGGCAAAGGCAGGGGTGTGATTGCTACCAAGCGATTCTCCCGGGGAGACTTTGTGGTAGAATACCATGGAGACCTCATTGAAATCACCGATGCCAAGAAGCGGGAGGCTCTGTATGCACAGGACCCCTCCACGGGCTGCTACATGTACTATTTTCAATATCTGAGCAAAACCTACTGCGTGGATGCCACTCAAGAAACGAACCGCCTGGGGAGACTGATCAATCACAGTAAGTGTGGGAATTGCCAGACCAAACTGCATGACATCGACGGCGTGCCTCACCTCATCCTCATAGCCTCCCGAGACATTGCGGCCGGGGAGGAGCTCCTGTACGACTATGGAGACCGGAGCAAGGCCTCCATCGAAGCCTACCCTTGGCTGAAGCACTAACCAACCATGTGgcctccctgcctccctgccaccctgcctccttcAAAGGACAAAGTGCCCTCAAAGGGAAATGAATTTTTTacacacacacacacacacacacacacacacacacacacacacacacacacactcacacTCACTCTTAGCTAATTACTTCAAATGTTTTTAAAAAGTATATTAAAGATGCCTTTTCATGTAGTATTTAAATATCTGTTACAGGTTTCCAAGGTGGACTTGAACAGATGGCCTTATATTACCAAAACTTTTATATTCTAGTTGTTTTTCTACCTTTTTGCATACAAGCTGAACATTTGTGCTTCCCGCGCAGTGTAAGACTCGGCACAGGTTTTAGAGAATGGAGTTGAACATGAACTAGGAAGCCGGGCTCTGCCCAAGATGAAAGCCAGGACTCCCCCGCACCCCACGTCCGAGGACAGGCCGGTGTGAGGGTGCTGCCACCCCCACGCACAGCCTGGACGGGATGTCTCCAAGCTCTTGTTCTCCTCAACGTCTTGACAGGTGTACACATTGACGTGTATGAATATTTTTTAGCAAAAGTTTCACAGTAAGCTAGTCTTCCCCTCTGCTTTCTCCAAAGCTTACTGAGCCCGGGGCTCGGAGGCCCGGCCAGGAACAGACCTCTTCCACAGGCTTACGGCTTTTCCAGGCACCTTGAAGCATCAGGGTGGGCAGTCAGACTAGAGGCGGGCCGGGAAAAGCACTGTTCTCCTGCCCAAGAAGGGCAGGTCTCCTGAAACTGCATTAATTCTTTATAGAAATGTGAACACTGAATTTATTTTAAAAAATAATAATAAAAAAACAAAATAGTAAAAAAAAATTTAAAAAGAAAAAAAATGGAAAAAAAAAACCCACAGAAAACAACTTAACATGTATATAGGTTTTGAAGGGAGTGAAATGAATGCAGTTTTCTTTTCTTCTGGGGTTTATTTTTCTTTTTGGCTTGGCTGGTTGGTTTGTGTAGAGAAGATTTGAGATGGTACTCTATTCTAATCAAAAGTGAGGTTTGTAGTGGGACCAGAAATTACTAAGCCCACACCCCCTCCCCAACCCCAATTCTGCTACGTGGGAAGTTCTCTACCTGCTGTCAAGGCAGAACCCCTGGTCTCCCGTGAAGATGCCGTCAGTCCTGTGGGCATCAGACACCAGATGTGTTTGGCTCTAGGGTACCTGGCAGCCCGCAAGGCTTAGCAGCCAGAGATCAGGAGGATCCTTCAGTTGTAACCTGTGATAGCAAGAGTAGGCTTCCTTCTCCCTCCTTGGGGAGGACTAACCATTCACCTTCAGTCCAGGGGGCCTGGGGTTCAGGAGCCAGGTGTAAGAGCCTACCCTTGTCCCCAGTACCTCCATCTCCCAGCCTCATGATGGTGCTACCTAAGAAAGTCTTCCCCGCACCCTTTGCTAGCCCAGTCAGTGGTCAGACTTGGAGGAGGATCCGACAGGAGGGTGTAACTGTGAGATAAAATGTCTTGGTTGTACCTGTTTGTGGCTTAGCTTTGTATTTAAATAGCAAACAAAAAAAGGAAATAAACTTGAAACTTATTTGTCATCTTAAAAATAAAGCAAAAAAATTAAAGTATTTATTTCCAGGCAAGGGCA
>XM_017598458.1
GCTACAGTTGTTGCAACTTTTTTCGAAAGCTGGGTTTCCCGGGAGATTCCAGACGGTGACAGAGCGGGGCCATGGCTAGAGGAGAACGTGTTTGCTGGGCAGTCAAAGATCTATGCCTACATGAGTCCGAACAAATGCTCTGGAATGCGTTCTCCACTGCAGGAAGAGAACTCCGTCGCACATCATGAGGTCAAATGCCCGGGGAAACCATTGGCCGGAATCTACAGGAAGCGAGAAGAGAAAAGAAACGCTGGGAATGTTATCCGAAGCGCTGTGAAGTCAGAAGAACAGAAGAGCAAAGATACCAGGAGAGGTCCCCTGGCGCCTTTTCCAAACCAAAAACCTGAAGCAACAGAACCTCCAAAAACTCCACCCCCGTCATGTGATTCTACCAGTGTAGCGGTTGCTAAGCAAGCCCTGAAAAAGCCCCTCAAGGGCAAGCAGGCCCCTCGGAAGAAGTCTCAAGGGAAGACACAGCAGAATAGAAAACTCACAGATTTCTACCCCGTGCGAAGGAGCTCCAGGAAGAGCAAAGCTGAGCTGCAGTCTGAAGAAAGGAAGAAGATAGATGAGCTAATTGAGAGCGGGAAGGAAGAGGGCATGAAGATTGATCTAATCGATGGCAAAGGCAGGGGTGTGATTGCTACCAAGCGATTCTCCCGGGGAGACTTTGTGGTAGAATACCATGGAGACCTCATTGAAATCACCGATGCCAAGAAGCGGGAGGCTCTGTATGCACAGGACCCCTCCACGGGCTGCTACATGTACTATTTTCAATATCTGAGCAAAACCTACTGCGTGGATGCCACTCAAGAAACGAACCGCCTGGGGAGACTGATCAATCACAGTAAGTGTGGGAATTGCCAGACCAAACTGCATGACATCGACGGCGTGCCTCACCTCATCCTCATAGCCTCCCGAGACATTGCGGCCGGGGAGGAGCTCCTGTACGACTATGGAGACCGGAGCAAGGCCTCCATCGAAGCCTACCCTTGGCTGAAGCACTAACCAACCATGTGgcctccctgcctccctgccaccctgcctccttcAAAGGACAAAGTGCCCTCAAAGGGAAATGAATTTTTTacacacacacacacacacacacacacacacacacacacacacacacacacactcacacTCACTCTTAGCTAATTACTTCAAATGTTTTTAAAAAGTATATTAAAGATGCCTTTTCATGTAGTATTTAAATATCTGTTACAGGTTTCCAAGGTGGACTTGAACAGATGGCCTTATATTACCAAAACTTTTATATTCTAGTTGTTTTTCTACCTTTTTGCATACAAGCTGAACATTTGTGCTTCCCGCGCAGTGTAAGACTCGGCACAGGTTTTAGAGAATGGAGTTGAACATGAACTAGGAAGCCGGGCTCTGCCCAAGATGAAAGCCAGGACTCCCCCGCACCCCACGTCCGAGGACAGGCCGGTGTGAGGGTGCTGCCACCCCCACGCACAGCCTGGACGGGATGTCTCCAAGCTCTTGTTCTCCTCAACGTCTTGACAGGTGTACACATTGACGTGTATGAATATTTTTTAGCAAAAGTTTCACAGTAAGCTAGTCTTCCCCTCTGCTTTCTCCAAAGCTTACTGAGCCCGGGGCTCGGAGGCCCGGCCAGGAACAGACCTCTTCCACAGGCTTACGGCTTTTCCAGGCACCTTGAAGCATCAGGGTGGGCAGTCAGACTAGAGGCGGGCCGGGAAAAGCACTGTTCTCCTGCCCAAGAAGGGCAGGTCTCCTGAAACTGCATTAATTCTTTATAGAAATGTGAACACTGAATTTATTTTAAAAAATAATAATAAAAAAACAAAATAGTAAAAAAAAATTTAAAAAGAAAAAAAATGGAAAAAAAAAACCCACAGAAAACAACTTAACATGTATATAGGTTTTGAAGGGAGTGAAATGAATGCAGTTTTCTTTTCTTCTGGGGTTTATTTTTCTTTTTGGCTTGGCTGGTTGGTTTGTGTAGAGAAGATTTGAGATGGTACTCTATTCTAATCAAAAGTGAGGTTTGTAGTGGGACCAGAAATTACTAAGCCCACACCCCCTCCCCAACCCCAATTCTGCTACGTGGGAAGTTCTCTACCTGCTGTCAAGGCAGAACCCCTGGTCTCCCGTGAAGATGCCGTCAGTCCTGTGGGCATCAGACACCAGATGTGTTTGGCTCTAGGGTACCTGGCAGCCCGCAAGGCTTAGCAGCCAGAGATCAGGAGGATCCTTCAGTTGTAACCTGTGATAGCAAGAGTAGGCTTCCTTCTCCCTCCTTGGGGAGGACTAACCATTCACCTTCAGTCCAGGGGGCCTGGGGTTCAGGAGCCAGGTGTAAGAGCCTACCCTTGTCCCCAGTACCTCCATCTCCCAGCCTCATGATGGTGCTACCTAAGAAAGTCTTCCCCGCACCCTTTGCTAGCCCAGTCAGTGGTCAGACTTGGAGGAGGATCCGACAGGAGGGTGTAACTGTGAGATAAAATGTCTTGGTTGTACCTGTTTGTGGCTTAGCTTTGTATTTAAATAGCAAACAAAAAAAGGAAATAAACTTGAAACTTATTTGTCATCTTAAAAATAAAGCAAAAAAATTAAAGTATTTATTTCCAGGCAAGGG