Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ssu72
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
Also known as 1190002E22Rik|1500011L16Rik|2610101M12Rik
Coordinate chr4:155789272-155818336
Strand +
Gene summary Predicted to enable RNA polymerase II CTD heptapeptide repeat phosphatase activity. Predicted to be involved in dephosphorylation of RNA polymerase II C-terminal domain; mRNA polyadenylation; and termination of RNA polymerase II transcription. Predicted to be located in cytosol and nucleoplasm. Predicted to be part of mRNA cleavage and polyadenylation specificity factor complex. Is expressed in facial ganglion; trigeminal ganglion; and vestibulo-cochlear ganglion. Orthologous to human SSU72 (SSU72 homolog, RNA polymerase II CTD phosphatase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ssu72

Retroname Coord Strand Genomic Region ENSG
Ssu72P1 chr14:124222486-124223229 - Intragenic
 ENSMUSG00000082738 UCSC

Expression

Transcript Sequences

>NM_026899.3
CTAGAAGTCCAGTGACTCTGAGGAAGGTACTCGTGATAGAGATAGGGCACAAACCAAGTGCTGGAGCCCAGTGCATCTATGAAATTGGCAGAGTGACCACCTGGAGGAAACCGGAATGAAAAACGTCCCAACCACACCAAGAGAAGCCGCGGAAAGGACTTGAGACTCCCCGGACCCGCCCCAACGCCCGTCCCACTGAAGTTTTCAGTATTGCGCAAGCGCCGCGCCTAGCGCGTCATCCGAGGCGACGGTACATTAGGACGCAGGCGCGGCTCACACCGCTCCAGTTGCCGGCGCAGGTCCTGTGACGTCACGCGCCGGCGAAGGTGGTCCACGACCGCCGGCCTCGGCTGCTCTCAGGCTGATTCGGCGTCGGCCGGTCGCCCTCCCGCGCCGGCTGCAGTACGAGCCCAGGAGAGCACCGTCGGCCTCCCCACGCGTTGCGTTGCGTTGCGTTGCGTTCACTTCCGTGTCGCAGATTTCCGGTTACCGCCATCTTCCTCGCGCGGAAGCCGGCTTCTAGGTGGGAGCTCCGTAGCGAGAGCAGTGGGTAGTTCGGTCGGTGCCATGCCGTCATCGCCGCTGCGGGTGGCGGTGGTGTGCTCGAGTAACCAGAATCGGAGCATGGAAGCACACAACATCCTCAGCAAGCGAGGTTTCAGTGTCCGCTCCTTTGGAACAGGAACTCATGTGAAGCTCCCAGGACCAGCACCTGACAAGCCCAATGTTTATGACTTCAAAACCACATATGACCAGATGTACAATGACCTCCTCAGGAAAGACAAAGAACTCTATACACAAAATGGAATTTTACATATGTTGGACAGAAATAAAAGGATCAAGCCCCGTCCAGAAAGGTTCCAGAACTGCACGGACCTGTTTGACTTGATCCTCACTTGTGAAGAGAGAGTCTATGACCAGGTTGTAGAAGATCTGAACTCCAGAGAACAGGAGACCTGCCAGCCAGTGCATGTGGTCAATGTGGACATCCAGGACAACCATGAAGAGGCCACTCTGGGAGCATTCCTTATCTGCGAGCTCTGCCAGTGTATCCAGCACACTGAGGACATGGAGAATGAAATCGACGAGCTGCTGCAGGAGTTCGAGGAGAAGAGTGGCCGGGCCTTTCTGCATACTGTCTGCTTCTACTGAGCCTCCTGTGCTCGGTGCATGGCCTGCCCTGCACAGCCACCTTTGTTGAAGCCACTTTTTCAGTGTGTTTTCCTTTCAGATATTTGTTTTTACTGCTAGGTGTACATCATCAATGTACTGTACATATGGAATGAGACGTACGCAGAAATGCCAGAttcaaatccattgtttttaaccaaaagaaataaagatggtTTACTCTACAGCCTACAGCAAGTGTCTGTTGTTGGCCCTTTTCTCTCCACTGCTGAATTGTACAGAAACCTAAATAAAGCAACAGGCTGTCttattaaggggaaaaaaaa