Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Mcts1
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name malignant T cell amplified sequence 1
Also known as 1500019M23Rik|MCT-1
Coordinate chrX:37653682-37702401
Strand +
Gene summary Predicted to enable translation initiation factor activity. Predicted to be involved in IRES-dependent viral translational initiation; formation of translation preinitiation complex; and ribosome disassembly. Predicted to act upstream of or within cellular response to DNA damage stimulus; regulation of growth; and translational initiation. Predicted to be located in cytosol and plasma membrane. Predicted to be part of cytosolic small ribosomal subunit. Orthologous to human MCTS1 (MCTS1 re-initiation and release factor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Mcts1

Retroname Coord Strand Genomic Region ENSG
Mcts1P2 chr4:115160503-115160844 - Intergenic
 N/A UCSC
Mcts1P3 chr15:19066234-19066653 - Intergenic
 ENSMUSG00000115815 UCSC
Mcts1P1 chr2:152529186-152529740 + Intergenic
 ENSMUSG00000042814 UCSC

Expression

Transcript Sequences

>NM_001356360.1
CTTGTCTTGAGAACAACGTGGTAGCCCTATGTGCTAGTCTGTGTAAGGAAGACCAATTTCCTTGGAAACCTATCCAGTGGGTTTATCTTCCAGATCTGATAGACGcaaaaggaaaaaaggggaaCATGGGCAAAGGAAGatttgatgaaaaagaaaatgtgtccaaCTGCATCCAGTTGAAAACCTCGGTTATTAAGGGTATTAAAAATCAATTGCTAGAGCAATTTCCAGGTATTGAACCATGGCTTAATCAAATCATGCCTAAGAAAGACCCTGTGAAAATTGTCCGATGCCATGAACACATAGAAATCCTTACAGTAAATGGAGAATTACTGTTTTTTAGACAAAGAGAAGGGCCTTTTTATCCAACTTTAagattacttcataaatATCCTTTTATCTTGCCACATCAGCAGGTTGATAAAGGAGCCATCAAATTTGTACTCAGTGGAGCAAATATCATGTGTCCTGGCTTAACTTCTCCCGGAGCTAAGCTTTATCCTGCTGCAGTAGATACTATTGTTGCAATCATGGCAGAAGGAAAACAACATGCTTTATGTGTGGGTGTCATGAAGATGTCTGCAGAAGATATtGAGAAAGTAAACAAAGGAATTGGCATTGAAAATATCCATTATCTAAATGATGGTCTGTGGCATATGAAGACATATAAATGAGCCTCAAAAGGAATGTGCATGGGCTAACTATGGATACTGtgctgtatctgtgtctgtgtctgtgtgacagCATGAAGACAAAGCCTCTATGATTATGCTGAATAAAAATTCCGCGGATgcttaatttctgttagtttcagaaattattttaacttttcttaAACAAAAATTATAATGTGGTAGCAAACTTGGCTATTAAAAGGTATATGGTAAATAACTCAA
>NM_026902.4
AACCAGAAAGAATTGCTTGATCACTTCTTCCTTCTGAAGTCCCGCCCTTTCGGCTACCCCCAATGGAGACTAAGCTGTTACTGAAAAGGAGCCGACAAAAGCGTCAACGTGGAGTCGAGAGGAGCGGAAGTAGTCAGATTTCGCTAAGGGCCGTAAAGCGGATAGTGTTTTCGCCTTCCGGATTAACGACAGCAGCTCCGACTGTCAGTGCAGGCCTTCCTCGTGCTGGACCCTTCCTAATTCAATTTCCTTCCCATTCCGGGCCCTTCCCTATCGTCGCCCCTTTCACCTTGGATCATGTTCAAGAAatttgatgaaaaagaaaatgtgtccaaCTGCATCCAGTTGAAAACCTCGGTTATTAAGGGTATTAAAAATCAATTGCTAGAGCAATTTCCAGGTATTGAACCATGGCTTAATCAAATCATGCCTAAGAAAGACCCTGTGAAAATTGTCCGATGCCATGAACACATAGAAATCCTTACAGTAAATGGAGAATTACTGTTTTTTAGACAAAGAGAAGGGCCTTTTTATCCAACTTTAagattacttcataaatATCCTTTTATCTTGCCACATCAGCAGGTTGATAAAGGAGCCATCAAATTTGTACTCAGTGGAGCAAATATCATGTGTCCTGGCTTAACTTCTCCCGGAGCTAAGCTTTATCCTGCTGCAGTAGATACTATTGTTGCAATCATGGCAGAAGGAAAACAACATGCTTTATGTGTGGGTGTCATGAAGATGTCTGCAGAAGATATtGAGAAAGTAAACAAAGGAATTGGCATTGAAAATATCCATTATCTAAATGATGGTCTGTGGCATATGAAGACATATAAATGAGCCTCAAAAGGAATGTGCATGGGCTAACTATGGATACTGtgctgtatctgtgtctgtgtctgtgtgacagCATGAAGACAAAGCCTCTATGATTATGCTGAATAAAAATTCCGCGGATgcttaatttctgttagtttcagaaattattttaacttttcttaAACAAAAATTATAATGTGGTAGCAAACTTGGCTATTAAAAGGTATATGGTAAATAACTCAA