Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Spcs1
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name signal peptidase complex subunit 1 homolog (S. cerevisiae)
Also known as 1810004F21Rik
Coordinate chr14:30721783-30723623
Strand -
Gene summary Enables ribosome binding activity. Predicted to be involved in several processes, including protein targeting to ER; signal peptide processing; and viral protein processing. Predicted to act upstream of or within proteolysis. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be part of signal peptidase complex. Predicted to be integral component of endoplasmic reticulum membrane. Is expressed in several structures, including alimentary system; cranium; ear; integumental system; and nervous system. Orthologous to human SPCS1 (signal peptidase complex subunit 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Spcs1

Retroname Coord Strand Genomic Region ENSG
Spcs1P4 chr14:52658027-52658550 + Intergenic
 ENSMUSG00000105132 UCSC
Spcs1P2 chr7:43513246-43513861 + Intergenic
 ENSMUSG00000108527 UCSC
Spcs1P1 chr6:87070537-87071186 + Intergenic
 N/A UCSC
Spcs1P3 chr11:22938564-22938838 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_026911.3
GCAGGCGCCACGGGGCAGCCCCGTCGCCCGGGTCCTCCCCGAGTAAAGGCCGTCGCTATGGAGACGTGGAGCGCGCCGGCGGCCGTTAAACTGGGGAGGCGCAGCCCGCAAGTGATTCCTGCCGCAATTACAGCTCCGGGCGGCCAGGAGCGCTGACCGGTGCACGATGCTCCGGCCAGGTCGCTGCCCCAGCCCTCGTGAGCAGTGTACAGGGTTCTAGGAAAGCTAAGAGACGTACCTCCCTTGTCGATGGCGCGGGGCGGGGCCAGGGGTTGTCCGTGCCCCTCGGAGACATCCGCTTCCGGGGCCACGGCCGAAGTGAAACGCTCGGCTGGTCGGCCTTGCTCTCGATATCGACCCCCGCAAACTTTACTCCTTAATAATCGGCTACGTCCGTTTCGTTGTCGGTATCGGTCTTCAGCAACCATGCTGGAACACCTGAGTTCGCTGCCCACCCAGATGGATTACAAGGGGCAGAAACTAGCTGAACAGATGTTTCAGGGGATCATTCTTTTTTCTGCAATAGTTGGGTTTATCTACGGGTACGTGGCTGAACAGTTTGGGTGGACTGTCTACATAGTTATGGCCGGATTTGCTTTCTCCTGTTTGCTGACACTTCCTCCATGGCCTATCTACCGCCGCCATCCCCTAAAGTGGTTACCTGTTCAAGACTTAGGCACAGAAGACAAGAAATCAGGGGACAGAAAAATTAAGAGGCATGCTAAAAATAACTGATTGGGACTTTCATGATTCAGCACCTGCTTTTGTTTCCTGTGAGATGAGCTGAATTGCTTTCATAAGCAAAACATGAGCTTAAACCGCCTATGTTCTTATAGCACAGCTGTGTCGAGATCTAATTGTCATGGCTTCATTTCTAATCCAAATGTATTTTAAGTTATGACTATTTTATACCATCTCTTCATAAGCTTGTTATGGAGAACAGGAGATACAAGTATGCAATGCTTCTTTCCCGTGTGTATAATGAATAAACACTTCATAACTTGTa