Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps28
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein S28
Also known as -
Coordinate chr7:18682071-18683440
Strand -
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation; maturation of SSU-rRNA; and ribosomal small subunit assembly. Part of cytosolic small ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond Blackfan anemia 15 with mandibulofacial dysostosis. Orthologous to human RPS28 (ribosomal protein S28). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps28

Retroname Coord Strand Genomic Region ENSG
Rps28P1 chr1:78703955-78704253 - Intergenic
N/A UCSC
Rps28P2 chr1:85433211-85433520 + Intergenic
N/A UCSC
Rps28P3 chr2:236495816-236496044 + Intragenic
N/A UCSC
Rps28P4 chr2:31871287-31871562 - Intergenic
N/A UCSC
Rps28P5 chr3:103037044-103037355 + Intergenic
N/A UCSC
Rps28P6 chr3:60417715-60417955 + Intergenic
N/A UCSC
Rps28P7 chr6:109266882-109267083 - Intergenic
N/A UCSC
Rps28P8 chr9:119657232-119657402 + Intergenic
N/A UCSC
Rps28P9 chr9:39920595-39920815 - Intragenic
N/A UCSC
Rps28P10 chr9:56454936-56455244 + Intergenic
N/A UCSC
Rps28P11 chr10:35065663-35065951 - Intergenic
N/A UCSC
Rps28P12 chr10:40766385-40766697 - Intergenic
N/A UCSC
Rps28P13 chr10:43679011-43679163 + Intergenic
N/A UCSC
Rps28P14 chr11:44367332-44367622 - Intergenic
N/A UCSC
Rps28P15 chr13:31381555-31381852 + Intergenic
N/A UCSC
Rps28P16 chr13:83924157-83924448 - Intergenic
N/A UCSC
Rps28P17 chr14:104987687-104987995 + Intergenic
N/A UCSC
Rps28P18 chr16:70644450-70644754 + Intergenic
N/A UCSC
Rps28P19 chr16:71592962-71593287 + Intergenic
N/A UCSC
Rps28P20 chr17:12591161-12591452 + Intergenic
N/A UCSC
Rps28P21 chr18:36180299-36180606 - Intergenic
N/A UCSC
Rps28P22 chr18:62125844-62126096 + Intergenic
N/A UCSC
Rps28P23 chr20:13766773-13767084 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001105730.1
GTGACTCCTCTCCGCTAGATCTCCGCCATCATGGACACGAGTCGCGTGCAGCCCATCAAGCTGGCTAGGGTAACTAAAGTGCTGGGCAGGACCGGATCGCAGGGACAGTGCACGCAGGTGCGAGTGGAATTTATGGATGACACCAGCCGCTCTATCATCCGAAACGTCAAAGGCCCTGTTCGAGAGGGTGATGTGCTCACCCTGTTGGAGTCAGAAAGAGAAGCTCGGAGGTTGCGCTGACCTTGCTGCTGGGTTCTGGATATCCACTCCTTAGCCCATGGAATGACCTGCAACTGTTAAATAAAGCATTTGTATTCATTCTTGTCTAGAAATTGGTTT