Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Polr2d
Plot displaying the genomic locations of a parental gene (in chr18) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name polymerase (RNA) II (DNA directed) polypeptide D
Also known as 2310002G05Rik|2610028L19Rik|HSRBP4|RBP4
Coordinate chr18:31922178-31929762
Strand +
Gene summary Predicted to enable translation initiation factor binding activity. Predicted to be involved in RNA metabolic process; mRNA export from nucleus in response to heat stress; and positive regulation of translational initiation. Predicted to be located in cytosol and nuclear speck. Predicted to be part of RNA polymerase II, core complex. Predicted to be active in P-body. Is expressed in several structures, including alimentary system; brain; cranium; heart; and respiratory system. Orthologous to human POLR2D (RNA polymerase II subunit D). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Polr2d

Retroname Coord Strand Genomic Region ENSG
Polr2dP2 chr11:5445300-5445447 - Intergenic
 ENSMUSG00000085232 UCSC
Polr2dP3 chr15:19756453-19756923 + Intergenic
 ENSMUSG00000115233 UCSC
Polr2dP1 chr5:38732113-38732714 - Intergenic
 ENSMUSG00000086422 UCSC

Expression

Transcript Sequences

>NM_001357480.1
CGCGGCTTCCGTCTCCGGCGGTGGCTGTGGCGGCACGTCCTAAAGTAATGGCGGCGGGTGGAAGCGATCCTCGGGCTGGCGACGTAGAAGAAGACGCTTCCCAGCTTATCTTTCCCAAAGAGTTTGAGACAGCGGAGACTCTGCTGAACTCGGAAGTCCACATGCTTCTGGAGCATCGAAAGCAGCAGAACGAGAGCGCGGAGGACGAGCAGGAGCTGTCGGAGGTCTTCATGAAAACCCTCAACTACACGGCCCGCTTCAGCCGGTTCAAAAACAGAGAGACCATTGCCAGTGTGCGCAGCCTGGAAGGGCGTTTTGAAGATGAGGAGCTGCAGCAGATTCTCGATGACATCCAGACGAAGCGCAGCTTCCAGTACTGATCCGCAGACGTCACTCTGCTCCTTGAGTTACAGCACCACGGTCTGAAGCCTGGGGAGGCCTCATGCAGGAACATTGCTTCAGAAGACGCTGGAGCTTCTTTCGTAGTTTTTGCTTCACTGCGAGAGAGTGTCTCTCCAGTTCTCAAAGTCataacagtcctcctgcctcagcctcgcaggtgctgggattacaggtgtgagccaacaCTTTCAGCTTGGCTtctggagaggaaagaaaggctgGCTATTGATGCTGTAGGTGCTATCTTCACAGTGACTGTTAGACCATAACTACCATCTGCGCTCCTTGCAGCCTTTTAAGGCTGCTGTGGTCAGGCAGGCTGCCATCCTGAACTGCTGAGGTAGAATGATGTTCAAACATTCGTTGACTACTTCGTACCGTGGTTTTTTTGGACCCCATGTTACTATTTTTTTGTTCTTGACACTTCAGATTTTAATGTCAATTATTTTGTAGTTTTTGAAGCTAAAATGATATATAAAAAACTTGCATAGGAGAGGAGTGTTTTCACTTGGTTGTAAAGGGGAGAAATAAACCAgaacactgtttttttttaaaagaa
>NM_027002.4
CGCGGCTTCCGTCTCCGGCGGTGGCTGTGGCGGCACGTCCTAAAGTAATGGCGGCGGGTGGAAGCGATCCTCGGGCTGGCGACGTAGAAGAAGACGCTTCCCAGCTTATCTTTCCCAAAGAGTTTGAGACAGCGGAGACTCTGCTGAACTCGGAAGTCCACATGCTTCTGGAGCATCGAAAGCAGCAGAACGAGAGCGCGGAGGACGAGCAGGAGCTGTCGGAGGTCTTCATGAAAACCCTCAACTACACGGCCCGCTTCAGCCGGTTCAAAAACAGAGAGACCATTGCCAGTGTGCGCAGCTTGCTTCTCCAGAAAAAGTTACATAAGTTTGAGTTGGCCTGTTTAGCCAATCTTTGCCCGGAGACTGCTGAAGAGTCCAAAGCTCTGATTCCAAGCCTGGAAGGGCGTTTTGAAGATGAGGAGCTGCAGCAGATTCTCGATGACATCCAGACGAAGCGCAGCTTCCAGTACTGATCCGCAGACGTCACTCTGCTCCTTGAGTTACAGCACCACGGTCTGAAGCCTGGGGAGGCCTCATGCAGGAACATTGCTTCAGAAGACGCTGGAGCTTCTTTCGTAGTTTTTGCTTCACTGCGAGAGAGTGTCTCTCCAGTTCTCAAAGTCataacagtcctcctgcctcagcctcgcaggtgctgggattacaggtgtgagccaacaCTTTCAGCTTGGCTtctggagaggaaagaaaggctgGCTATTGATGCTGTAGGTGCTATCTTCACAGTGACTGTTAGACCATAACTACCATCTGCGCTCCTTGCAGCCTTTTAAGGCTGCTGTGGTCAGGCAGGCTGCCATCCTGAACTGCTGAGGTAGAATGATGTTCAAACATTCGTTGACTACTTCGTACCGTGGTTTTTTTGGACCCCATGTTACTATTTTTTTGTTCTTGACACTTCAGATTTTAATGTCAATTATTTTGTAGTTTTTGAAGCTAAAATGATATATAAAAAACTTGCATAGGAGAGGAGTGTTTTCACTTGGTTGTAAAGGGGAGAAATAAACCAgaacactgtttttttttaaaagaa