Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ccdc115
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name coiled-coil domain containing 115
Also known as 2310061I09Rik|Ccp1
Coordinate chr1:34475751-34478753
Strand -
Gene summary Predicted to enable unfolded protein binding activity. Predicted to be involved in cellular cation homeostasis; cellular response to increased oxygen levels; and lysosomal protein catabolic process. Located in lysosome. Is expressed in several structures, including brain; genitourinary system; liver; lung; and spinal cord. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type IIo. Orthologous to human CCDC115 (coiled-coil domain containing 115). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ccdc115

Retroname Coord Strand Genomic Region ENSG
Ccdc115P1 chr1:159205970-159207192 + Intergenic
 ENSMUSG00000103289 UCSC
Ccdc115P2 chr5:126102202-126103491 - Intergenic
 ENSMUSG00000105189 UCSC

Expression

Transcript Sequences

>NM_027159.2
GCTTCACCGGTGCTTGAGCTGGTCAGGCAGCAGGCTAGCGAAGAGTAAAAGCAGGAACTGTGCGCATGGCTTCCTAGATTCAAGTTAAGGTCCGACTTTTGGTAGCCATCGGATTCGAGAAGTATCCCGCTCCAGGCGCTAATCCGCGTCCTGGCTGGTGACAGGGATCACCCGGAAGTTGAAGCCTTTGACTTCCGGGTCACGATTAGTACTGCCCCCCTAAGGGCGGATCTTGAGCGCTTATTGGCTGTCATGCACATGGCCGCGCAGTGATTCGGCGGCTTGGAAGGAAGTGGCTCCGCCCATCCGCGCGTGTCCCAAGACTGGCTGGGCCATGGCGGTCCAGGCTCTGCGAGAGGAGTTGGACTCCAAGTGCCTACAGCTGCTCAGTGACCTGGAGGAACTGGAGGCGAAGCGGGCGGCGCTGAACGCCAGGGTGGAGGAGggTTGGCTCTCACTTGCCAAGGCTCGCTATGCCATGGGAGCCAAGTCGGTAGGACCCCTGCAGTATGCCTCGCGTATGGAGCCTCAGGTCTGCGTGCGTGCCAGcgaGGCCCAGGATGGACCCCAGACCTTCAGGGTGATCAAAGCTGACGCCCAGACCCCCGAGGAAGTGGGGCCTAGCGAAGCATctcTGCGCAGGCGCAAGGGCCCCACCAAGACCAAAGAGTTAGGATCTGCTGTAGTTCCTCAAGATCCCTTGAACTGGTTTGGAATTTTGGTTCCTCACAGTCTGCGGCAGGCCCAAGCCAGCTTCCGGGATGGCCTACAGCTGGCTGCAGATATAGCCAGTCTCCAGACTCGCATCAACTGGGGTCAGAGTCAGCTTCGAGGCCTCCAGAAAAAACTGAAGGAGTTGGACCCTGGGCCTGCCTGACCTGCATCCACATTGGGAGGCACTGAGCATAGCTGCCGTGGATGCTACCACCTTACCTCAGGCCTTCTTCTTTTTATAAGCAGCCCCTGTCTCAGCTGATGCCCCACCTAGAAATGTCCTTAGTCTGCGCGGTTTCTAGCTTTTCGAGGCATGAAGTTGAGTTATGAAGTTTGATGAAGCAAAGCTGAGCAGTGTAGAGAGCACCTAGTTCTAGGCCATGGTCTCAGGGCATGACAGTGACGTGTGAATAACCTGCGGCAGCCATCTGGGATAGTGAAGCCCTGCAGAAATGgtgacagagaagaaagggagtcTAGAAACATAAGGTAGATCAGGACAATTCCAGTCAATAAAAGTACCTCAGGCTGGGCGTGGCAGCGCGTGCCTGTAGCTCCAGCAactctagaggctgaggcaggaggatcacttaaGCCCTGGGAAGTTTATAGAcaagacagcacacacacacacacacaaatacacaaataccaGAATAGCTAGCAGGAAATATTACTTCtgttataaaaggaaaaataactcATTCTTCCGGGGAATCAGGGTGACCTTCCTGATTGCACTTAGCTTATAGAAGTGAGACCCAGCTGCTTTGCTGAAGGTGCATTCTCTCACCTGGAAACTGTGTCTTGCTTCACGTTTTTTTCCTGAGCTATCCAGTTGTGTTGGGAAGGGGAATGTAATTGTTTGTGGGGTGTAAATATTTCTTCCTAATTTGTTAATTTTGCTTATATTGGTTTTTCTACTTATGAATTGTAAAAACAGAAATTTGTACAGAAAAATTGAATAAAGTAAAAGCTACAGTAAGTGTCA