Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Pin4
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name peptidyl-prolyl cis/trans isomerase, NIMA-interacting, 4 (parvulin)
Also known as 2410002I22Rik|EPVH|Par14
Coordinate chrX:101163075-101171279
Strand +
Gene summary Predicted to enable bent DNA binding activity and double-stranded DNA binding activity. Predicted to be involved in rRNA processing. Predicted to be located in several cellular components, including mitochondrial matrix; nuclear lumen; and spindle. Predicted to be part of preribosome. Is expressed in 2-cell stage embryo and 4-cell stage embryo. Orthologous to human PIN4 (peptidylprolyl cis/trans isomerase, NIMA-interacting 4). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pin4

Retroname Coord Strand Genomic Region ENSG
Pin4P11 chr18:31871766-31872111 + Intergenic
ENSMUSG00000117533 UCSC
Pin4P2 chr1:60306668-60306805 - Intragenic
ENSMUSG00000100516 UCSC
Pin4P1 chr1:183152390-183152829 + Intergenic
ENSMUSG00000103415 UCSC
Pin4P8 chr11:78475968-78476434 - Intragenic
Intragenic
ENSMUSG00000082110 UCSC
Pin4P10 chr17:65867359-65867780 - Intergenic
ENSMUSG00000117158 UCSC
Pin4P3 chr3:137610744-137611183 + Intragenic
ENSMUSG00000081829 UCSC
Pin4P4 chr6:3863029-3863447 - Intergenic
ENSMUSG00000108091 UCSC
Pin4P5 chr6:66989467-66989873 + Intragenic
ENSMUSG00000084154 UCSC
Pin4P6 chr7:39840307-39840770 + Intergenic
ENSMUSG00000056836 UCSC
Pin4P12 chrX:98005671-98006094 - Intergenic
ENSMUSG00000082549 UCSC
Pin4P7 chr10:61914095-61914239 - Intergenic
N/A UCSC
Pin4P9 chr14:109315417-109315790 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001365090.1
CCTTTTGCTAGCACCGGAACAGTTGCCGGAGAGTTCATCCGCCAGCTTAAGAGATGCCGCCGAAGGGGAAAAGTGGTTCTGGAAAAGGAGGGAAAGGTAGACCTGCCGAGACAGTCATGGAGCGAGCGTAGGGGTGGatggggagaaggacaggagtAGACCTGCAgctgtgtggggtgggggagggaggtgaTCATAAGCCGGACAGCAGGGCCACCGGGAGCACCCTGAGCCGCTGTGGTTTATGTTTGGGCTTCTTGTGGAGGTGCAGCCTCTGGGAGTGACAGTGCTGACAAGAAGTCTCAGGGTCCTAAAGGTGGTGGCAATGCAGTAAAGGTCAGACACATTCTGTGTGAAAAACATGGGAAAATCATGGAAGCCATGGAAAAGTTAAAGTCTGGGATGAGATTCAGTGAAGTGGCCACACAATATAGTGAAGATAAAGCCAGACAAGGGGGTGACTTGGGTTGGATGACCAGAGGATCCATGGTGGGGCCATTTCAAGAAGCAGCGTTTGCCTTGCCTGTAAGTGGGATGGATAAGCCTGTGTTTACAGACCCACCAGTTAAGACAAAATTTGGATATCATATTATTATGGttgaagggagaaaataaaatcacatgaAAGACTGACTaa
>NM_027181.2
CCTTTTGCTAGCACCGGAACAGTTGCCGGAGAGTTCATCCGCCAGCTTAAGAGATGCCGCCGAAGGGGAAAAGTGGTTCTGGAAAAGGAGGGAAAGGAGGTGCAGCCTCTGGGAGTGACAGTGCTGACAAGAAGTCTCAGGGTCCTAAAGGTGGTGGCAATGCAGTAAAGGTCAGACACATTCTGTGTGAAAAACATGGGAAAATCATGGAAGCCATGGAAAAGTTAAAGTCTGGGATGAGATTCAGTGAAGTGGCCACACAATATAGTGAAGATAAAGCCAGACAAGGGGGTGACTTGGGTTGGATGACCAGAGGATCCATGGTGGGGCCATTTCAAGAAGCAGCGTTTGCCTTGCCTGTAAGTGGGATGGATAAGCCTGTGTTTACAGACCCACCAGTTAAGACAAAATTTGGATATCATATTATTATGGttgaagggagaaaataaaatcacatgaAAGACTGACTaa