Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Snrpf
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name small nuclear ribonucleoprotein polypeptide F
Also known as 2010013O18Rik|SMF|sm-F|snRNP-F
Coordinate chr10:93418891-93425520
Strand -
Gene summary Predicted to enable RNA binding activity. Predicted to be involved in spliceosomal snRNP assembly. Predicted to act upstream of or within mRNA processing. Predicted to be located in cytosol and nucleus. Predicted to be part of several cellular components, including methylosome; nucleus; and pICln-Sm protein complex. Is expressed in central nervous system and sensory organ. Orthologous to human SNRPF (small nuclear ribonucleoprotein polypeptide F). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snrpf

Retroname Coord Strand Genomic Region ENSG
SnrpfP4 chr14:47806867-47807293 + Intergenic
ENSMUSG00000115571 UCSC
SnrpfP1 chr4:150399599-150400011 - Intragenic
ENSMUSG00000085787 UCSC
SnrpfP2 chr7:30131846-30132147 + Intergenic
ENSMUSG00000109467 UCSC
SnrpfP3 chr8:69678173-69678526 - Intragenic
ENSMUSG00000110538 UCSC

Expression

Transcript Sequences

>NM_027246.1
GTCGGCCATTTCTCTTAGCGCGGGTCGCTTGGTTGTAGCGGCAGCCGCTCCGGTCACGAGGGGCGGGCAGCGGCGGAGTCGGCGGCTAGCGGGGTGCAGCGCTCGCCGGTGGTCGCGATGAGTCTACCCCTCAACCCCAAGCCCTTTCTCAATGGGCTGACAGGGAAGCCAGTGATGGTGAAACTTAAGTGGGGCATGGAGTACAAGGGCTACCTGGTCTCCGTGGATGGCTACATGAACATGCAGcttgcaaatacagaagagtACATAGATGGGGCGCTGTCTGGACATCTGGGCGAAGTTCTAATAAGGTGTAATAATGTCCTCTACATCAGAGGCgttgaagaagaagaggaagatggggaAATGAGAGAATagcatcttggatttttttttttatatatatatgtatttctataCAATAAAGATTTGGGGttcttttttttcaacttgacttGTGGACTATTTAATGCAAAGCGCAAATGTTGAAACAATGGATGGATAATTCTTAGAACTAAAGTTTTAAAAGCCTCTCAGTTTTATTCaagggactctttttttttttttgtaatcccACCGCTGGTTTAACTGAGACCTCATAAAAGCAGCAGTGTTGTTTAAGGTTTCCAAACCACTTGTAACATCCATAAAGTTAAACATTTTCTTAGTATTAATATATATTGTATTAATAAATCATTATTTCTATATTGACATAGACTAAATAATGTATATTATAGCTAAGTCAAAAcatgaaaattgaaataattatgGAGATAAAATACAATACAAATTGATATTTAGGCTGAAGATGTA