Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Mrto4
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name mRNA turnover 4, ribosome maturation factor
Also known as 2610012O22Rik|Mg684|Mrt4
Coordinate chr4:139074751-139079887
Strand -
Gene summary Predicted to be involved in nuclear-transcribed mRNA catabolic process; rRNA processing; and ribosomal large subunit biogenesis. Predicted to be located in cytoplasm and nucleus. Predicted to be part of preribosome, large subunit precursor. Predicted to be active in nucleolus. Is expressed in alimentary system; genitourinary system; and liver lobe. Orthologous to human MRTO4 (MRT4 homolog, ribosome maturation factor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Mrto4

Retroname Coord Strand Genomic Region ENSG
Mrto4P1 chr12:20467684-20468653 + Intergenic
 ENSMUSG00000113749 UCSC
Mrto4P2 chr12:21825888-21826857 - Intergenic
 ENSMUSG00000091105 UCSC
Mrto4P5 chr17:5989359-5989923 + Intergenic
 ENSMUSG00000116734 UCSC
Mrto4P4 chr16:10854503-10854879 - Intergenic
 ENSMUSG00000115911 UCSC
Mrto4P3 chr14:52381041-52381547 - Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001290810.1
GGGCCTCAAGCCCCTCCCTCCGCAGAGCCATAGAGAGGAACCGGTTCGCGAGGGACTTGGTGGAGTGCTCGGGACTCGGAAGCCGCCGGGACTGGAGGGACCCGGGACCTGGGCAGAGAAGTGGCCTTCAGGACACTGGGCGGAGCGCAGGCGGGGAAGAGAGGGCTCGCCACAGTTCAGGCACACGCGAGGGGCAGCCCCGAGCGCCGTCCCATAAGCCCCCGCGGCAGCCGGGTCCTAACCGGCCGCCCAGTCTTCCGCCGCACGTGCCTTTGCCGCGATGCCCAAATCCAAGCGAGACAAGAAAGttTCTTTAACAAAAACTGCCAAGAAAGGCTTGGAACTGAAGCAGAACCTGATAGAAGAGCTTCGGAAATGTGTGGACACCTACAAGTACCTTTTCATCTTCTCTGTGGCCAACATGAGGAACAGCAAGCTGAAAGACATCCGGAACGCCTGGAAACACAGCCGGATGTTCTTTGGCAAAAACAAGGTGATGATGGTGGCCTTGGGTCGAAGCCCATCTGATGAATACAAAGACAACCTACATCAGGTCAGCAAGAAGTTGAGAGGTGAAGTTGGGCTGCTGTTTACCAACCGCACGAAGGAGGAGGTGAATGAGTGGTTCACCAAGTATACAGAAATGGATTTTGCTCGAGCGGGGAACAAAGCAACTCTAACTGTGAGCCTGGATCCAGGGCCCCTGAAGCAATTCCCTCACTCCATGGAGCCACAGCTGAGGCAGCTGGGGCTGCCCACTGCCCTCAAGAAAGGTGTGGTGACCCTGCTGTCTGACTATGAAGTATGCAAAGAGGGTGATGTGCTGACCCCAGAGCAGGCCCGTATCCTGAAGCTGTTTGGGTATGAGATGGCTGAATTCAAAGTGATCATCAAATACATGTGGGACGCCCAGTCGGGACGATTCCAGCAGATGGACGATGACCTGCCTGAGAGCGCGCCTGAGTCTGAGGGAGAgtctgaggaggaggatgacagCTGACTCTGAGAGCCAGGACTATGGCCTTCCAGCGAGTTCTTCATCTTTGCtggacaccccaccccacctcaccctgcCCCCGGACTGCTGTCACCACTCTAGAGGGAACAGCTATTTATTTTGCTATGGACAAAGACAAGGGAGGGTGCTAGGGAATGATTTTGTttctataaagaataaaattgtgTCCGCGGGGTGTTCCCGGGAGACAGCAGgaga
>NM_001356476.1
GGGCCTCAAGCCCCTCCCTCCGCAGAGCCATAGAGAGGAACCGGTTCGCGAGGGACTTGGTGGAGTGCTCGGGACTCGGAAGCCGCCGGGACTGGAGGGACCCGGGACCTGGGCAGAGAAGTGGCCTTCAGGACACTGGGCGGAGCGCAGGCGGGGAAGAGAGGGCTCGCCACAGTTCAGGCACACGCGAGGGGCAGCCCCGAGCGCCGTCCCATAAGCCCCCGCGGCAGCCGGGTCCTAACCGGCCGCCCAGTCTTCCGCCGCACGTGCCTTTGCCGCGATGCCCAAATCCAAGCGAGACAAGAAAGttTCTTTAACAAAAACTGCCAAGAAAGGCTTGGAACTGAAGCAGAACCTGATAGAAGAGAGCCTCATGAATTGTCCCACAGCTTCGGAAATGTGTGGACACCTACAAGTACCTTTTCATCTTCTCTGTGGCCAACATGAGGAACAGCAAGCTGAAAGACATCCGGAACGCCTGGAAACACAGCCGGATGTTCTTTGGCAAAAACAAGGTGATGATGGTGGCCTTGGGTCGAAGCCCATCTGATGAATACAAAGACAACCTACATCAGGTCAGCAAGAAGTTGAGAGGTGAAGTTGGGCTGCTGTTTACCAACCGCACGAAGGAGGAGGTGAATGAGTGGTTCACCAAGTATACAGAAATGGATTTTGCTCGAGCGGGGAACAAAGCAACTCTAACTGTGAGCCTGGATCCAGGGCCCCTGAAGCAATTCCCTCACTCCATGGAGCCACAGCTGAGGCAGCTGGGGCTGCCCACTGCCCTCAAGAAAGGTGTGGTGACCCTGCTGTCTGACTATGAAGTATGCAAAGAGGGTGATGTGCTGACCCCAGAGCAGGCCCGTATCCTGAAGCTGTTTGGGTATGAGATGGCTGAATTCAAAGTGATCATCAAATACATGTGGGACGCCCAGTCGGGACGATTCCAGCAGATGGACGATGACCTGCCTGAGAGCGCGCCTGAGTCTGAGGGAGAgtctgaggaggaggatgacagCTGACTCTGAGAGCCAGGACTATGGCCTTCCAGCGAGTTCTTCATCTTTGCtggacaccccaccccacctcaccctgcCCCCGGACTGCTGTCACCACTCTAGAGGGAACAGCTATTTATTTTGCTATGGACAAAGACAAGGGAGGGTGCTAGGGAATGATTTTGTttctataaagaataaaattgtgTCCGCGGGGTGTTCCCGGGAGACAGCAGgaga
>NM_023536.3
GGGCCTCAAGCCCCTCCCTCCGCAGAGCCATAGAGAGGAACCGGTTCGCGAGGGACTTGGTGGAGTGCTCGGGACTCGGAAGCCGCCGGGACTGGAGGGACCCGGGACCTGGGCAGAGAAGTGGCCTTCAGGACACTGGGCGGAGCGCAGGCGGGGAAGAGAGGGCTCGCCACAGTTCAGGCACACGCGAGGGGCAGCCCCGAGCGCCGTCCCATAAGCCCCCGCGGCAGCCGGGTCCTAACCGGCCGCCCAGTCTTCCGCCGCACGTGCCTTTGCCGCGATGCCCAAATCCAAGCGAGACAAGAAAGttTCTTTAACAAAAACTGCCAAGAAAGGCTTGGAACTGAAGCAGAACCTGATAGAAGAGCTTCGGAAATGTGTGGACACCTACAAGTACCTTTTCATCTTCTCTGTGGCCAACATGAGGAACAGCAAGCTGAAAGACATCCGGAACGCCTGGAAACACAGCCGGATGTTCTTTGGCAAAAACAAGGTGATGATGGTGGCCTTGGGTCGAAGCCCATCTGATGAATACAAAGACAACCTACATCAGGTCAGCAAGAAGTTGAGAGGTGAAGTTGGGCTGCTGTTTACCAACCGCACGAAGGAGGAGGTGAATGAGTGGTTCACCAAGTATACAGAAATGGATTTTGCTCGAGCGGGGAACAAAGCAACTCTAACTGTGAGCCTGGATCCAGGGCCCCTGAAGCAATTCCCTCACTCCATGGAGCCACAGCTGAGGCAGCTGGGGCTGCCCACTGCCCTCAAGAAAGGTGTGGTGACCCTGCTGTCTGACTATGAAGTATGCAAAGAGGGTGATGTGCTGACCCCAGAGCAGGCCCGTATCCTGCTGTTTGGGTATGAGATGGCTGAATTCAAAGTGATCATCAAATACATGTGGGACGCCCAGTCGGGACGATTCCAGCAGATGGACGATGACCTGCCTGAGAGCGCGCCTGAGTCTGAGGGAGAgtctgaggaggaggatgacagCTGACTCTGAGAGCCAGGACTATGGCCTTCCAGCGAGTTCTTCATCTTTGCtggacaccccaccccacctcaccctgcCCCCGGACTGCTGTCACCACTCTAGAGGGAACAGCTATTTATTTTGCTATGGACAAAGACAAGGGAGGGTGCTAGGGAATGATTTTGTttctataaagaataaaattgtgTCCGCGGGGTGTTCCCGGGAGACAGCAGgaga