Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name TFAM
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name transcription factor A, mitochondrial
Also known as MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3
Coordinate chr10:58385409-58399220
Strand +
Gene summary This gene encodes a key mitochondrial transcription factor containing two high mobility group motifs. The encoded protein also functions in mitochondrial DNA replication and repair. Sequence polymorphisms in this gene are associated with Alzheimer's and Parkinson's diseases. There are pseudogenes for this gene on chromosomes 6, 7, and 11. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2012]

Retrocopy(s) from TFAM

Retroname Coord Strand Genomic Region ENSG
TFAMP2 chr11:109907065-109907795 - Intergenic
ENSG00000254798 UCSC
TFAMP1 chr7:1614603-1616697 + Intergenic
ENSG00000230444 UCSC

Expression

Transcript Sequences

>NM_003201.3
ATAGTGCCTCGCTAGTGGCGGGCATGATAACACACGCCGGAGGGTCGCACGCGGGTTCCAGTTGTGATTGCTGGAGTTGTGTATTGCCAGGAGGCTCTCCGAGATTGGGGTCGGGTCACTGCCTCATCCACCGGAGCGATGGCGTTTCTCCGAAGCATGTGGGGCGTGCTGAGTGCCCTGGGAAGGTCTGGAGCAGAGCTGTGCACCGGCTGTGGAAGTCGACTGCGCTCCCCCTTCAGTTTTGTGTATTTACCGAGGTGGTTTTCATCTGTCTTGGCAAGTTGTCCAAAGAAACCTGTAAGTTCTTACCTTCGATTTTCTAAAGAACAACTACCCATATTTAAAGCTCAGAACCCAGATGCAAAAACTACAGAACTAATTAGAAGAATTGCCCAGCGTTGGAGGGAACTTCCTGATTCAAAGAAAAAAATATATCAAGATGCTTATAGGGCGGAGTGGCAGGTATATAAAGAAGAGATAAGCAGATTTAAAGAACAGCTAACTCCAAGTCAGATTATGTCTTTGGAAAAAGAAATCATGGACAAACATTTAAAAAGGAAAGCTATGACAAAAAAAAAAGAGTTAACACTGCTTGGAAAACCAAAAAGACCTCGTTCAGCTTATAACGTTTATGTAGCTGAAAGATTCCAAGAAGCTAAGGGTGATTCACCGCAGGAAAAGCTGAAGACTGTAAAGGAAAACTGGAAAAATCTGTCTGACTCTGAAAAGGAATTATATATTCAGCATGCTAAAGAGGACGAAACTCGTTATCATAATGAAATGAAGTCTTGGGAAGAACAAATGATTGAAGTTGGACGAAAGGATCTTCTACGTCGCACAATAAAGAAACAACGAAAATATGGTGCTGAGGAGTGTTAAAAGTAGAAGATTGAGATGTGTTCACAATGGATAGGCACAGGAAACCAGTTAGGTCTCAATACCTGAAGCTATCGTAAAATTAAGAAAGGATAAAGTTGGTAAACCTTTTATATTTAGTATCTTTTTATTCAGCTCATGGACTTCTGCCAGCATAATACTTGCTTTGGAAAACCCAGATAAAGGTTCATGCAAACTTTATTTTGTGTTTAGGAACTACTGAGGATCAGAGTAATCCAAGCAAATGTGAATCATTTTACCTTTGACAAAGGTAAATCAGACTATGAAGTTTTTTTTATACAGGATGATGACTATGGAAAGAGTACTCTTGTTTCCTTATATTATGGAGGCAGGAGTTTCGTTTTCAAAATTGTTACAAATTGTAGAAGCCACGGTGTTCTGTGATATAAGTGTGTGTTTTTCATAAAGCAGGCAGAACTCATCTAGGTAAATTACAGTTCCTAGGTATAATTCACATTGTATTCAGAGTTGATGGTTGTACATATAAGTGATTGCTGGTTTTAGTTGCAACTTTGTATAAAAGGGACTGAGAAATTTATAAACTTTTTTCTTACTGTCTTTTTTCTAAAGTAAAAACAAAGAAATTATGTGCCAGATTTATGCATATTATTTTATGTTGCATAGAATAAAATttttaatctttaattttacatttcctaaatatattttaaGACGAAACATTTGTTCTATAGCTTTTCCCTTTTTTTAAGTAAGGAATTTTATTTTTTTCTGAATTATTTTCTCTCGTGAGTATATTGATCCAGAAAGAAAACTTGTATTATGTGTGTTTTAAAATGAGAAATCTAAAAAACGAAAAGTCTCCAAAGTCTCTGGAATTTGAAACACTTTGCATAACGTATAAAAGCCTGTTTaagagacagccaactatggcctgtggatcaaatccagcctgctgcctgctttttatggcctgtgagctaggaattgtgtttataattttaaatgtttttttttaaagacttttatgatacttgaaaattaacatgaatatttagtgttcataaataaagtttgttgaaacacaaccaagatcattcttttacttgtctatggctgcttttctgtggcagagtagctgccacagaaactatagcccacaaagcctgatatttactgtctgtctgtttatggaaaaaatttatcaacccatgGTCTATAGTATAGTGTGATATGACTACTGTTCCAATGTATTGAAGTGTTGGGATAGTTTTTTCAAATGTTTTCAGATGTTCTTGTTTTAGAATCATTGTCACCTTTAAGAGGAAAAAGGTCATCACTAGATAATCTAAACAAATTGTTGCTTCTCAGTGTTAGCAAGGAAAATAATCTAGTTTCAAATTACATTGCAGTATAATGAAAAAGATCCATATACTGTGGAATGATATTCTTTTAAAATTATTTGCTATGGCTTGGTAAAAATGTACTTTTTCCAGTAGCACATATCACAAGAACCTCACTGTAGTTGAAAGCCATCTTTCTTTAGTATTTGTTTATCCTTTTAGGAGAGTCAAGCAAAGGTTTTCACCACCTGTTTGAGCAGAATAATTCTCATCAGTTCACAGATATAGGATAACTCAATTTATATGCACTTTATGCGTTATGCAAAATATTTAGAAATTGTAGATTCTAGATCTCCAGAAAGACTTTGAAGACTTTGATGTCACAAAAAGATGACTTGTTATATGCTGAGCTTGACAAAGGTAGGAATGGGAGAGAAAAATAGTAGCTTATGAGGAAATATGAGGCTTTAAATATATAAAGTTGGATATTTTAAAATAACTTTTCCCTGTGGGAGCTTCTCACTCTGGGTGCAGACAGGACAGTGTTGGCCATTGGTGAAATAGATAGGATGGGTTTGAGGCCAGAGCAGTCTGGGAGTAGGGGGAAAGAGAAGGAGGTGTGCTAGTGTCTATCACAGGCTTTCTCAATTAGGTTTGCAGGAGAAAAAGCCCTAAGTCcctgtgtcatctagaatggtactaattatgtacagtccctaggagaatggagaaaatcataactcaaatcatcgactcaattctgttctcttcagatgagCTCAGAGAGCACATAGGAGTGTTTGTAATGAGGGGTATGTAATGATTGAGATAGAGGAATGAGTTACATAAACATCTCGGGACAAATGCAGCATAGAAAACATCTTTGTAGTTACCCTGCGGGGAAATTTCCTCTGAGTTCTTTTAACATTAACTACCCGTATTATTTTATACTTAACATTCATATCATACCTTCCCAAATATATTGGGAAGTTCAGTGTTAAGTACGTTTCTCAAGTACTTAACAACTTAATATAGGGAGGAAAGGTGTAAACAGTGAAAAAAGAGCAAAACTATTTTATGGTAATTTTATGGTAGTATCAGCTTGTATTTGGTTCTCTGTTTCTAAAATAATGTAATTTTTAATATTTTAAATAATAGGATAACCTGGTTTCCAAGCCTTTTTTTCCCCCGACATCCAGAATACACACTGGATCCAAGCCTTTCTTAAACATCAGTACATGTGGAAGACTGGCATGCCATATACCAAATGCCATTCAGCTGTAACAGTATACACAGATTTTCTCTTATAAAGAATAAGAACATCATAACCAATGACCACTCATATAAAGTCTTATTtgtgtgtgtgtgtgtgtgtgtgtgcacgtgtgtgtgtTagagtctcattatattgctcaggctggagggcatggtgtgatcttggctcactgcagccttgacctcctgggctcaagtgatccttccgagtcgttgggactacagtaggtgaacaccaccatgcctggctaatttttgtattttttttttaatcaagatgggatcttgctatgttgcccaggctggtctcaaactcctggcatcaagcgttcctccttccttggcctccttaagtgctgggattataggtgtgagccaccatgcttgaccATAAAGCCTTACTAtttcttttggagacacagtcttgctctgtccaagctggaatgcagtgatgtgatcatggctcactgcagccttgaactcccaggcttaagagatcctcccatctcagcctcctgagtagctgggattataggtgcagaccatcaagccttgctattatttttTAGACTTTTCTTAATTTCATCCAACAAAGTAGTTGCTGTAGGAGCTGAGTGTTAGAAGGAAAGATGCTGAAGAAATGAAATCAAGCAGGGTGTATACTGTCATGAATAGGCATACAGTAGTTTTTATACTTTTGTTCTTTGGAGTACCAATGTTAGGTTTTACAAAAGTAATTTGATGAGGGGAAGGAGGGTTGTGTATTTATTTTACTTTCTGATGTTTGCTTAAATAATACTGTGTACGTATTCAGCTTGCTGTAATTCTGTAATTACGCTATTGCGTTTGGCTAACTCCTTTTTGGAAATGTCTTTTTTTTTGTACAAGGCATGTGTTAGTTTTTACTAATTGCTCTGAATGTGTATATTTAGATTTCTGAATTGAAAAAAAATAGCGTACAATAAGTAGATTTAAAGTAATTAGAACACTTTATTGATTTTTCTGATGTTTTCTGTATCTAAAATTTATCACCACCAGGTTGTGCTAAAACAGCAGGAAGTTTTTATATTGTGAGTGACAGTACCCATTATTTCTCTTAATTTTACTAACATTTACTATAAGAATATTCTCTCGCTCTTTTCTCCACTCACAGCCATTCTCCCTCCTTCTCTTCATAACATCAAGCTGTCACAGACAAATCTGAAAATGTTACAAGCACAGACTATGTTGTATGTTTTGAAATTTTAGAACAGTAATGTTCTTTTTAAAATTGAACTTCTGCAGAGTAAGAAAATGAATACATTTATTACTTTAAATTTGTAAAATTTTCCAAAGTAAAACCATACAAAGCTAGTGTCAGTCTCTCTCATTGTTCACAAATAAAGGACTTTTGTTAATTGATTAAATCACTTACTATATTCGATATGAAATATATAAAACATACAACCATTATCTAATACATTTCAGAATGTTTCACTGGTTACAGGAGCCAGTAAATAAAGTTGACTCTAAACAGGAATTTTAAATAAACTAAACATTTTTTCATCACCAA