Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Rpf1
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosome production factor 1 homolog
Also known as 2210420E24Rik|2310066N05Rik|Bxdc5
Coordinate chr3:146212099-146227184
Strand -
Gene summary Predicted to enable RNA binding activity. Predicted to be involved in maturation of 5.8S rRNA and maturation of LSU-rRNA. Predicted to act upstream of or within ribosome biogenesis. Predicted to be located in nucleus. Predicted to be part of preribosome, large subunit precursor. Predicted to be active in nucleolus. Is expressed in embryo. Orthologous to human RPF1 (ribosome production factor 1 homolog). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpf1

Retroname Coord Strand Genomic Region ENSG
Rpf1P1 chr1:73350756-73351210 - Intergenic
 ENSMUSG00000100697 UCSC
Rpf1P2 chr7:43949169-43949996 - Intergenic
 ENSMUSG00000108512 UCSC

Expression

Transcript Sequences

>NM_027371.3
TTCCGTTTCCGTACAGCCGTAAACAACATGGCGAAGGCCGGCGAGAAAAGTGTTGGTGGCGGCAAGCGAGGCTTGAAGAGGAAAGCTGCCGCTGAAGAGCCTCAAGAGGCTGCGGCCGCGAGCGATGGGACGGCGGAGAGCGGGGTGCAGCCCGCGAAAGCGGCCGCCTTCCCCCCGGGCTTCAGTATCTCGGAGATTAAGAACAAGCAGCGGCGACACTTGATGTTCACGCGGTGGAAACAGCAGCAGCGGAAGGAAAAGTTGGCAGCTAAGAAAAaacttaaaaaggagagagaggctcTTGGCGATAAGGCTCCACCAAAGCCTGTTCCCAAGACCATTGACAACCAGCGCGTTTACGACGAGACCACAGTAGACCCCAATGATGAAGAGgTGGCTTACGATGAAGCGACGGATGAATTTGCTTCTTACTTCAACAGACAGACGTCTCCTAAGATTCTTATCACAACGTCAGATAGACCTCATGGGAGAACAGTTCGACTCTGTGAGCAGCTCTCAACAGTTATACCAGATTCACATGTTTATTACAGACGAGGACTGGCTCTGAAAAAAATTATCCCACAGTGCATTGCAAGAGATTTCACAGACCTGATCGTTATTAATGAAGATCGTAAAACACCGAATGGACTTATTTTGAGTCATTTGCCAAACGGTCCAACCGCTCATTTTAAAATGAGCAGTGTTCGTCTTCGTAAAGAAATTAAGCGAAGAGGCAAAGACCCCACAGAACATGTACCTGAGATAATTCTGAATAATTTTACCACACGGCTAGGCCATTCTATTGGACGCATGtttgcttctctctttcctcatAATCCTCAATTTATTGGAAGACAAGTTGCCACGTTCCACAATCAGCGAGATTACATCTTCTTCAGGTTTCACAGATACATATTCAAGAGTGAGAAGAAAGTGGGAATTCAGGAACTCGGACCACGTTTTACCTTAAAATTACGATCTCTTCAGAAGGGCACTTTTGATTCTAAATATGGAGAGTACGAATGGGTCCACAAGCCACGGGAAATGGATACAAGTCGAAGGAAATTCCACTTATAAAGGACTAGGGGAGCAGTACTGAATTTTGCTGGATtggcctgtcttgaaaaacttgGTAATTCAATGAAACACCCTTTTCAAaatggaatttgattttataaatCATGTATTTGAACAAATGACCAAGTACTGTGAATTTCTACTCCAtatagtaaatataaataaatataattttatttaggtCTGAAAA