Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Spdl1
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name spindle apparatus coiled-coil protein 1
Also known as 1700018I02Rik|2600001J17Rik|2810049B11Rik|Ccdc99
Coordinate chr11:34700012-34724492
Strand -
Gene summary Predicted to enable enzyme binding activity and kinetochore binding activity. Predicted to be involved in several processes, including establishment of mitotic spindle orientation; mitotic metaphase plate congression; and protein localization to kinetochore. Predicted to act upstream of or within cell division. Predicted to be located in nucleus. Predicted to be part of outer kinetochore. Predicted to be active in spindle pole. Is expressed in several structures, including alimentary system; axial musculature; brain; liver lobe; and maturing glomerular tuft. Orthologous to human SPDL1 (spindle apparatus coiled-coil protein 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Spdl1

Retroname Coord Strand Genomic Region ENSG
Spdl1P1 chr10:110992779-110993387 + Intergenic
ENSMUSG00000111968 UCSC
Spdl1P2 chrX:71513198-71513619 + Intragenic
ENSMUSG00000081471 UCSC

Expression

Transcript Sequences

>NM_027411.2
ATTCAAAAATCCCCGGCGCTTACTTAGCAGTGCTGCTGCCGAGTGAAGAGGGAGTTATTTCTGTGCTGAGGTGGAGTTAGTGTCACGAATCTGGGAGTCCAGTGCTCTCCGGACAGGCCTCCGGTTGCAGCAGCCAGGAAGCGTGAGGAGAGAGTAGGTTGAGAACAGACATCATGGAGGCAGATATCACAAATCTTCGGAACAAACTCAAAGAGTGTGAAGACGAGCGACTGAAAGCTGCACACTATGGCCTACAGCTCTTGGAGAGGCAGACGGAACTGCAGAGCCAACTGGATAAATGTCATGAAGAAATGATGATCACAGCAGAGAAATACAACCAAGAGAAGCATGCCCTTCAAAGAGAAGTGGAGCTCAAGAGTCGGATGTTAGACAGCCTGAGCTGTGAGTGTGAAGCTCTGAAACAGCAGCAGAAGGCGCAGCTGGAGCAGCTAGAGGTGCAGCTACATAGGAGCCACCGGCAGGAAGTGAGCGACCTGAAGAACAAGTTAGAAAATCTGAAAGTGGAATTGGATGAAGCAAGGCTTGGCGAGAAGCAGCTGAAGCAGAAGCTGGATCTGCAGGGGGAACTTCTCGCTCACAAGTCAGAAGAGCTCCGGCTCCTGTCTGAGCAGAGAGTGCTCAGTAGCATGTCTTCGGAGCTGCTGGCTCTTGAGACTGAGCTGACGGCAGCGGAAGGTGTGAAGAATGCCCTCAAAGAAGAGGTGAATGAACTGCAGTACAAACAAGAGCAGCTAGAATGTCTCAATACTTCCTTACTGCACCAGGTAGACAggcttaaagaagaaaaagaggagcgTGAGAGAGAAGCGGTCTCTTACTATAATGCCTTGGAGAAAGCTCGTGTAGAGAACCAGGATCTTCAGGTACAGCTGGGTCACGCACTCCAGCAGGCGGCGGACCCCAATAGCAAAGGGAACTCGCTGTTCGCAGAGGTGGAGGATCGAAGGGTGGCAATGGAACGCCAGCTCAACTTGATGAAAGACAAATACCAGTCACTGAAGAAGCAAAATGCGTTCACCAGAGATCAGATGAACAAGATGAAGTTACAAATCTCCACATTGCTGAGGATGAGGGGCTCGCAGACTGAGTTTGAACAGCAGGAGCGGTTGTTTGCCATGATAGAACAGAAGAATGGTGAAATAAAACACCTTTTAGGGGAAATTAATAAACTGGAGAAATTTAAGAACTTATATGAAAGTATGGAATCGAGGCCTTCCACATCAGACACCGCTTGTGTGCTAGAAGACAGCACCTATTACTCAGATCTACTTCAGCTGAAGCTTGATAAGCTAAAcaaagaaaatgaaagcacaaaggACGAGCTGTCCATCCAGAGGATGAAGGCTTTATTTGAGAGCCAGCGGGCCCTGGATATTGAGCGGAAACTGTTTACAAATGAAAGACACCTGCAGCTCTCAGAAAGTGAAAACATGAAACTGAGAGCGAAGCTAGATGAACTCAAGCTGAAGTATGAACCGGAAGAGAGAATTGAAGTACCTGTACTCAAAAGGAGGCGCGAGGTGCTGCCATTGAATATAACCACgccagaagaaacagaagaaacagctGCTGCCAGTGCCACTGAGGATGGAGTTTCTAGACTCCCACCTCACAGGGAGGAGGAATCCTGTCTTAATAGCTTAAAAGATAACACTGTGCAGTGGAAACAGCCAGCCTCTTCATGTGTGCAGCCAGCCAGCCTCTCTCCTCATAAGAACCTGCATCTGGATACACAGccgaagaaggagaagaagtgtGTGAAGCTTGTGGATAGTCCGGCCAACATTGAGGTCTTACATGAACAAAGTGGGAATACCCCCAATTCTCCCAGGTTAACTGCAGAATCAAAGCTTCCAACAGAAGTGAAGGAAAGGATAGAAACTACAAGCAAATTGGGAAAAGGAGCTTGTAAGAAATCACACAACATCATATATGTGTCCTCAAAGTCAGCCCCAGAAACGCAGTGCTCACAGCAGTAGTGAGGCCTGCGCGCTGGGCCACGCTAACCATCGCTCCTATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTGGCGTGCTCGCACCGCTGTGACCAAGACTTCCGATGTGGCTGTGATTCTGACCCATAAGTCCTTAACTGATGATCCTTCTCAGAACTGTGGGTCACAGGGAACAGACCAGATCAGAAGAGAATGGGAGAATTTAAACCTACTTGCTGTGTTGGATGTGGAGTTTGAACATGGTTAAATAATCTGTCATAAGAACCAAAAATTAGAAAATGGaacacttaaaattatttataattttctttgtacATCGTTTTGCACTTAGATTTTCCTTGTCttgtaaaaataatgaaattggcttgaaaatatatattactacaaaatgttttaaagtgtGAAGTACCTATATTCATATGTGTAATTTAGATTTTATGACTCAAACATcaataattttgaaatttaaaataaaattgcagtAATTTcttcta