Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Polr3f
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name polymerase (RNA) III (DNA directed) polypeptide F
Also known as 2810411G20Rik|3010019O03Rik|3110032A07Rik|RPC39|RPC6
Coordinate chr2:144369665-144383699
Strand +
Gene summary Predicted to enable double-stranded DNA binding activity. Predicted to be involved in positive regulation of innate immune response and positive regulation of interferon-beta production. Predicted to act upstream of or within defense response to virus and innate immune response. Predicted to be located in nucleus. Predicted to be part of RNA polymerase III complex. Is expressed in several structures, including alimentary system; brain; genitourinary system; integumental system; and respiratory system. Orthologous to human POLR3F (RNA polymerase III subunit F). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Polr3f

Retroname Coord Strand Genomic Region ENSG
Polr3fP2 chr5:45926207-45926634 - Intragenic
ENSMUSG00000101587 UCSC
Polr3fP1 chr5:41874642-41875280 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_029763.3
GAAGAAGGTCCCTCGCCTCTCTCTCAAGCCTCGGTCCCCGGCGCGCGCCTCCACCGGTTCCCGAGACTTCCAGCGCGCTCCGAGGGGCCACTTTTCCTCTAGTCTCGAAAACTGCCCTCATGGCGGAGGTGAAGGTCAAGGTGCAGCCGCCGGACGCGGATCCGGTGGAGATAGAAAACAGAATTATAGAATTATGCCACCAGTTCCCTCATGGAATCACAGATCAAGTAATTCAGAACGAAATGCCTCACATTGAAGCCCAGCAGCGGGCAGTGGCCATCAATAGACTGTTATCCATGGGTCAGTTGGATCTTTTAAGGAGTAACACAGGCCTCTTATATAGAATAAAGGATTCTCAGAATGCTGGTAAAATGAAGGGGTCCGATAACCAGGAAAAACTGGTCTATCAAATCATAGAGGATGCAGGGAATAAAGGAATATGGAGCAGAGATATTCGGTACAAAAGTAACTTGCCGTTAACAGAAATCAACAAAATTCTCAAGAATTTGGAAAGTAAAAAGCTAATTAAAGCCGTGAAGTCTGTAGCAGCTTCCAAAAAGAAGGTTTATATGCTCTATAACCTGCAGCCAGACCGATCTGTGACTGGCGGTGCCTGGTACAGTGACCAGGATTTTGAATCTGAATTTGTTGAGGTGCTTAATCAACAGTGTTTCAAATTCCTACAAAGCAAGgcagagacagcaagagaAAGTAAACAGAATCCAGTGATACAAAGAAATAGTTCATTTGCATCGTCACATGAAGTCTGGAAGTACATCTGTGAGCTGGGCATCAGCAAGGTAGAGTTGTCCATGGAGGACATTGAAACCATCTTGAACACACTCATTTATGATGGCAAAGTGGAGATGACTATCATTGCTGCGAAGGAAGGCACTGTTGGCAGCGTAGATGGACACATGAAACTGTACAGGGCAGTCAACCCAATCCTCCCACCTACAGGCGTGGTCCGGGCACCCTGTGGACTCTGCCCCgtttttgagGACTGCCATGAAGGTGGTGAGATTTCGCCGTCTAATTGTATTTACATGACAGAGTGGCTTGAATTTTAATGAGAGCTGTGCACTTTATCTACATTTGGCAAACTGAACTCCATGGAGAACAAACAATTCATGATGGAGTGTAAATTTCTTTGAAAGCATACTTCACAATAATGGATACTGACTTGCTGCtatgaaaacatttatttatgaaGACAGAACACAAAGCAGATTGAGTTTAATAAAGTTTAATTGGGAAGTCTCTTCTTCAGTAAGTAAAATACCTTGAAGGTCTGGAAGGCAAGGAAAAGAAGCCAGCAAGCCTATGTTGACCAAGTACTGAGATAAAGGCTGGAACGAGAAGATGTTCACTAGAGTTGCTTCATTGAAAACTCATCGGGGTTATTACCAccatttgtttggttgtttttgggttttgttgagaAGAAATTACAAGTGGTGCAGACAGGAACAGCTGATGGCATGTGTGCCATCTTGGGGCCTGGGTAGTCAAGTGGGCATTCCTTTTTCATGCCATCTGTTGCTCTTCACCCCAGGACTCTTTCAGGGGAGTGTGCCTCCATACCGACCTCACTCCCAAATGCTGTTGTACAGGACGTGTTTCCACATCACTGTTATTCCATGCTAAAAGAAATAGTCTCACTGTTCCTTTTTTGTTAAGGCTATCACTTTTCTCTGTATGCCTTAATTGTATTATTTCCTGGGTTTTTTTCCAGATTCTCATTCCATGCCTGTAGTGTGACTCTCTCTACCACTAGTGCCAAATTCAAATTTTACAGtctaaattccaggacagccagagctatatagggagagacccagtctcacacatacaaataaaaatagaacattgCCCTTCATTCAGTCTCTGAGGGTTGGTAACCAGTATTTAGCTGGTGCCCTTTTCTCTTATTCTTCAAAACACTGGTATGACATGTCTGAGCAGAAAGCCATCACTGTGTACTTTCTCAGTCCTGGCTGTTCGGCCCTGGAAAACATTAATTGGCGTGCTGTTGTACAGAAGGTAGCCTCTGAAGGATCTCAGCTCGTGGATTGTctctttctaaagatttatttatctgtaagtacactgtagttgtcttcagacactccagaagagggcgtctgatttcattacagatggttgcaagccaccatgtggttgctgggatttgaacttgggaccttcagaagagcagtcagtgctcttaatccctgagccacctcaccagcactcccctcccctttttgttttgagacagggtttctctatgtagctctgactgtcctagaactctgtagaccaaactcagggatctgcctgcctctactgccCAAGGACTATGATTAAAGATGCGATACCCGCACCTggctcttttttccatttttatctctcttacatatttaattttctaGTAAGGTAAGACTAGTGCTTATTTGATAGGTCAGGCAGATCGGACATTGTTACCATGCCGCACCTCACAAgaggtggagggaaaaaaaaccctgtgttttatatataatctAACACTTAAAATAGCTGGTGTCATTGAATGCTTACTCTTATAGAGCTGGCCATAGACTTCATCTGATAAAAGTGAACTAGTGAGTTTGATTTTACTCAGGTAACTAATGATGCTATTCACTTAGAGCACTGTCAGAAGGTGGTAGAACTCAGCTCCACAGAGGATCCCAGTGCAAACCCTTTAAGTTGGTCCATGCTTTTGGCTTATATAAAAAACTTAGTACGATCAAACAACCTTAGACACGAAGTAAGCTGAGTATAGTggaaagcctttaatcccagtacccaggaggcagaggcaggcagatctaggacagccagagctacataaagaaaccctatcttgaggAACCAAATAACAATAAAAGAGAGAAGTTATCTtctagccagcctggtctacagagtgagttccaggacagccagggctacacagaaaaaccctgtctcgaaaaaaaagaaaaaagttgtttTGGAAATCTGCTCCGCATTctgttttgttgttagagataaGAGCATCACTCCACACTGGCCTGGAATAAACTTGATggcccaggctggcattgaactcagttATTCTGCTttagctttccaagtgctgggattccaggcacgcATTTAGCAGCCGGGCCTGGCTTTGCATTGTCTTGATAATTAGATGAGTTTTTAAATCAGCACTCAGTGGTTAGAAATGTTCCTTGCCTCACCAGAATAAAGAGAGCTTAGATATTTTTCCTCAGCATTATTTTTTACTCTGAGTATTTTTGCCTTGTAATGTATTTTTTTACTGTATTAACTGAGAAGGATAGAGAAGTCTGAAAATGTAGCAACTGTTCTGTAAATAAAGTGGGAATAAGCTATCAAAAGAAATTGTGGGCCTCTAAAATCATAATGTCACAAAATCAAATTGCAGATGAAGCCCAGATTCTTCATACTCTCCCACTTAGTACTAGGCCTTTTGTTCACCTGAGCACACATACTACTAATCTGTTGAGGACCCCGTTTAAAAGTGATCCATAAAGAAGGGAGACATGAGGTGATTTAGTGGTTCTTAATGTGGATTCTCACATTAAACTTTGAATTTGGcaataaataagttttaaataaGGGTTTTGGTGGTAATTAAGCAAAGTAGTCATATCAATTCTGTGATGGACAGTGATCGAATACTCCTCGTACGATGAGGCCTCTGGCCCAACCATCAACCCAACAGTTAAGGGGGGAAAAGTAGTTTCAGATTTACTATCTGGTAGGTGAGAGATGAATACAAAATATGCGCCCTCTAGCAGTATGATCCAGTAAGACAGCATCTTGAACAGAATCCTGCCTCTATGTTGCTCCTGCAGGGTttataggtatgtgccacatCTGGACAAATAGCATTTTCTATCATGATGGAAATAGTCTTTATTTGGTGTTTAGTCCAGTAACCTTCAGCCAGATGGCTGGCCAGCACTTGACACAAATGATTAAGAGCTAAGTTTTTATTTAGTTGCCTGTGCATACTGTTTATATTAGACGGCACAGCTCAACAGAGAGCTCTCTTGCATACTCTCCCCCTGGGAATTATTGAAACTCACACTGAAATGTGTTAGTTTATAATTAAGATTTTTAacgtt