Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Stambp
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name STAM binding protein
Also known as 5330424L14Rik|5730422L11Rik|Amsh|mKIAA4198
Coordinate chr6:83520188-83552781
Strand -
Gene summary Predicted to enable Lys63-specific deubiquitinase activity; protein domain specific binding activity; and thiol-dependent deubiquitinase. Acts upstream of or within negative regulation of neuron apoptotic process and protein deubiquitination. Located in cleavage furrow. Is expressed in several structures, including brain; cardiovascular system; genitourinary system; gut; and respiratory system. Orthologous to human STAMBP (STAM binding protein). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Stambp

Retroname Coord Strand Genomic Region ENSG
StambpP2 chr8:61246102-61246459 + Intragenic
ENSMUSG00000109797 UCSC
StambpP1 chr2:145962233-145962774 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001362080.1
TAAATCCGTGGAGCGTAATTGAAGGAGTGGCGAGAGTGGGCGTGTCATCGGAGGTGACGTTTCCGGAAGCTCTGACTGTCATCCTTCACGAAAGGTGGGAAGGGTCCCGGGAATGCAGCGGGACTGGGGATCCTGGCGCGGTGGGACCCCGCGGGGAGAGGCCAACTTATTTGTCCAATGTCTGACCATGGGGATGTgagcctcccaccccaagacCGGGTGAGGATTCTGTCCCAACTTGGGAGTGCAGTTGAGTTAAATGAAGACATTCCACCCCGTCGCTACTACCGCTCCGGTGTTGAGATCATCCGCATGGCGTCCGTTTACTCGGAAGAAGGCAACATTGAACATGCCTTTATCCTCTACAACAAGTACATCACGCTGTTTATTGAAAAACTTCCGAAACACCGAGACTACAAATCAGCTATCATTCCTGAGAAGAAAGATGCTGTCAAGAAATTAAAGAGCGTCGCTTTCCCTAAAGCGGAAGAGCTGAAGACAGAGCTCTTGAGAAGATACACCAAAGAATATGAGCAGTATAAAGAGCGAAAGaaaaaggaagaagaggaacttGCCCGAAATATCGCCATCCAGCAAgagttggaaaaagaaaaacagagggttgctcagcagaagcagaagcagctagAGCAGGAGCAATTCCATGCCTTTGAGGAGATgatccagaggcaggagctggaaAAAGAACGGCTGAAAATTGTTCAAGAGTTCGGGAAGGTAGACCCTGGCCCCTGCGGGCCTCTGCTCCCTGATCTGGAAAAGCCTTGTGTAGATGTGGCCCCCAGCTCACCGTTCTCGCCCACGCAGACTCCAGACTGTAACACAGGCATGAGGCCAGCTAAGCCACCTGTGGTGGACAGGTCCCTGAAACCTGGAGCGTTAAGCGTCATAGAAAATGTTCCCACCATTGAAGGCCTGCGCCACATCGTGGTGCCCCGTAATCTGTGCTCAGAATTTCTCCAGCTTGCCAGTGCCAATACCGCCAAAGGCATTGAAACCTGTGGAGTCCTCTGTGGAAAACTGATGAGAAATGAATTCACAATCACACATGTTCTCATCCCCAGACAAAATGGTGGGCCTGATTATTGCCACACGGAGAATGAAGAAGAAATTTTCTTTATGcaggatgaccttggactcctcACTCTTGGCTGGATCCATACTCATCCAACCCAAACGGCCTTTCTGTCCAGTGTGGATCTCCACACTCACTGCTCCTACCAAATGATGTTACCAGAGTCCATCGCAATCGTCTGTTCCCCAAAGTTCCAGGAAACTGGATTCTTTAAGCTAACTGACTATGGTCTTCAAGAGATTTCAACCTGCCGGCAGAAAGGCTTTCACCCCCATGGCAGAGACCCACCGCTGTTCTGTGACTGCAGCCATGTCACTGTCAAGGACAGAATTGTGACGATCACAGACCTTCGATAAATCTCAAATCATGAACCAGGGAGATGGATCACTGGGTAAcagcacttgtcaccaagcccaACAGCCCAGGCTCAGttcttgggacccacatggtagaaggagtgtACCGACATtcccccaagttgtcctctaacctccacatgtgtgctgtggtatgtgtgttctcacgtgtgtgtgcacatacacacacacacgcatatcaattaatttaaaaagcgaataaatgtaaattataaaaAGAGTCCTACCCCCCTCTTAAGCTGCATATCCCGTTCAGTTTATTGCCCCCATGGAGTTGAGTAAGCTTTTAAGACAGGATAGGAAAGGGTCAACACTAAGGGgagactgttgttgttgttgttgttgttgttgttgttgtttttccttaatTTGAAATcatcttattttttaagacaaatgTGAAAATGACCAAATCACACCAAGCAACTAACTCAAAAATTAGGATGCAAGAGAAAATACTTCTCTAGATCCAAACACTGGCCTTCTGTTCCTCTTGAAATTTACCTCCCAACTTGTTCATCTCTGCCTTTGGACTAAATAGGGGCATCTGTGCAAAACTGTAGAAGCCATTTTGAAGGATTTGGCTTTTTATTGTTTGTGGCATTAATAAGGGAGCTTACCATTCTGGTGGGATGTGCATGAGGCGTTCACAGCCCCCATACATGGATCTTGTTTAAAGTGTATTATTTAAAAGGTCAGGGtgttattttcttctataataaaaCAGCTCACTTGTGTTGTGCTCCAGAGTGA
>NM_024239.2
TAAATCCGTGGAGCGTAATTGAAGGAGTGGCGAGAGTGGGCGTGTCATCGGAGGTGACGTTTCCGGAAGCTCTGACTGTCATCCTTCACGAAAGAACTTATTTGTCCAATGTCTGACCATGGGGATGTgagcctcccaccccaagacCGGGTGAGGATTCTGTCCCAACTTGGGAGTGCAGTTGAGTTAAATGAAGACATTCCACCCCGTCGCTACTACCGCTCCGGTGTTGAGATCATCCGCATGGCGTCCGTTTACTCGGAAGAAGGCAACATTGAACATGCCTTTATCCTCTACAACAAGTACATCACGCTGTTTATTGAAAAACTTCCGAAACACCGAGACTACAAATCAGCTATCATTCCTGAGAAGAAAGATGCTGTCAAGAAATTAAAGAGCGTCGCTTTCCCTAAAGCGGAAGAGCTGAAGACAGAGCTCTTGAGAAGATACACCAAAGAATATGAGCAGTATAAAGAGCGAAAGaaaaaggaagaagaggaacttGCCCGAAATATCGCCATCCAGCAAgagttggaaaaagaaaaacagagggttgctcagcagaagcagaagcagctagAGCAGGAGCAATTCCATGCCTTTGAGGAGATgatccagaggcaggagctggaaAAAGAACGGCTGAAAATTGTTCAAGAGTTCGGGAAGGTAGACCCTGGCCCCTGCGGGCCTCTGCTCCCTGATCTGGAAAAGCCTTGTGTAGATGTGGCCCCCAGCTCACCGTTCTCGCCCACGCAGACTCCAGACTGTAACACAGGCATGAGGCCAGCTAAGCCACCTGTGGTGGACAGGTCCCTGAAACCTGGAGCGTTAAGCGTCATAGAAAATGTTCCCACCATTGAAGGCCTGCGCCACATCGTGGTGCCCCGTAATCTGTGCTCAGAATTTCTCCAGCTTGCCAGTGCCAATACCGCCAAAGGCATTGAAACCTGTGGAGTCCTCTGTGGAAAACTGATGAGAAATGAATTCACAATCACACATGTTCTCATCCCCAGACAAAATGGTGGGCCTGATTATTGCCACACGGAGAATGAAGAAGAAATTTTCTTTATGcaggatgaccttggactcctcACTCTTGGCTGGATCCATACTCATCCAACCCAAACGGCCTTTCTGTCCAGTGTGGATCTCCACACTCACTGCTCCTACCAAATGATGTTACCAGAGTCCATCGCAATCGTCTGTTCCCCAAAGTTCCAGGAAACTGGATTCTTTAAGCTAACTGACTATGGTCTTCAAGAGATTTCAACCTGCCGGCAGAAAGGCTTTCACCCCCATGGCAGAGACCCACCGCTGTTCTGTGACTGCAGCCATGTCACTGTCAAGGACAGAATTGTGACGATCACAGACCTTCGATAAATCTCAAATCATGAACCAGGGAGATGGATCACTGGGTAAcagcacttgtcaccaagcccaACAGCCCAGGCTCAGttcttgggacccacatggtagaaggagtgtACCGACATtcccccaagttgtcctctaacctccacatgtgtgctgtggtatgtgtgttctcacgtgtgtgtgcacatacacacacacacgcatatcaattaatttaaaaagcgaataaatgtaaattataaaaAGAGTCCTACCCCCCTCTTAAGCTGCATATCCCGTTCAGTTTATTGCCCCCATGGAGTTGAGTAAGCTTTTAAGACAGGATAGGAAAGGGTCAACACTAAGGGgagactgttgttgttgttgttgttgttgttgttgttgtttttccttaatTTGAAATcatcttattttttaagacaaatgTGAAAATGACCAAATCACACCAAGCAACTAACTCAAAAATTAGGATGCAAGAGAAAATACTTCTCTAGATCCAAACACTGGCCTTCTGTTCCTCTTGAAATTTACCTCCCAACTTGTTCATCTCTGCCTTTGGACTAAATAGGGGCATCTGTGCAAAACTGTAGAAGCCATTTTGAAGGATTTGGCTTTTTATTGTTTGTGGCATTAATAAGGGAGCTTACCATTCTGGTGGGATGTGCATGAGGCGTTCACAGCCCCCATACATGGATCTTGTTTAAAGTGTATTATTTAAAAGGTCAGGGtgttattttcttctataataaaaCAGCTCACTTGTGTTGTGCTCCAGAGTGA