Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name LDHB
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Macaca mulatta
Full Name N/A
Also known as -
Coordinate chr11:23007599-23030687
Strand -
Gene summary This gene encodes the B subunit of lactate dehydrogenase enzyme, which catalyzes the interconversion of pyruvate and lactate with concomitant interconversion of NADH and NAD+ in a post-glycolysis process. Alternatively spliced transcript variants have been found for this gene. Recent studies have shown that a C-terminally extended isoform is produced by use of an alternative in-frame translation termination codon via a stop codon readthrough mechanism, and that this isoform is localized in the peroxisomes. A pseudogene has been identified on chromosome 18. [provided by RefSeq, Feb 2016]

Retrocopy(s) from LDHB

Retroname Coord Strand Genomic Region ENSG
LDHBP2 chr3:133626753-133628015 + Intragenic
ENSMMUG00000019109 UCSC
LDHBP1 chr1:122836759-122838021 - Intergenic
N/A UCSC
LDHBP5 chr8:106083707-106084974 - Intergenic
N/A UCSC
LDHBP7 chr11:58802776-58804055 - Intergenic
N/A UCSC
LDHBP9 chr12:53471013-53472280 + Intragenic
N/A UCSC
LDHBP3 chr4:21320059-21321303 - Intergenic
ENSMMUG00000053187 UCSC
LDHBP4 chr5:127308976-127310244 - Intergenic
N/A UCSC
LDHBP6 chr10:35820044-35821221 + Intergenic
N/A UCSC
LDHBP10 chr16:46940134-46941406 + Intergenic
N/A UCSC
LDHBP11 chrX:73145932-73147042 - Intergenic
N/A UCSC
LDHBP8 chr11:67916361-67917402 - Intergenic
ENSMMUG00000047361 UCSC

Expression

Transcript Sequences

>NM_001195809.2
CCTCCTCCCTCCTTGCAGAGCCGGCGCCGGAGGAGACGCACGCAGCTCACATTGTGTTCTCCGCACTGCTGTTACTGAGGTCTCCAGCGCCTTCTCCCTCCTGTGTAAAATGGCAACTCTTAAGGAAAAACTCATTGCACCAGTTGCGGAAGAAGAGGCAACAGTCCCAAACAATAAGATCACTGTAGTGGGTGTTGGACAAGTTGGTATGGCGTGTGCTATCAGCATTCTGGGAAAGTCTCTGGCTGATGAACTTGCTCTTGTGGATGTTTTGGAAGATAAGCTTAAAGGAGAAATGATGGATCTGCAGCATGGGAGCTTATTTCTTCAGACGCCTAAAATTGTGGCAGATAAAGATTATTCTGTGACTGCCAATTCCAAGATTGTAGTGGTAACTGCAGGAGTCCGTCAGCAAGAAGGGGAGAGTCGGCTCAATCTGGTGCAGAGAAATGTTAATGTCTTCAAATTCATTATTCCTCAGATTGTCAAGTACAGTCCTGATTGCATCATAATTGTGGTTTCCAACCCAGTGGACATTCTTACATATGTTACCTGGAAACTAAGTGGATTACCCAAACACCGCGTGATTGGAAGTGGATGTAATCTGGATTCTGCTAGATTTCGCTACCTTATGGCTGAAAAACTTGGCATTCATCCCAGCAGCTGCCATGGATGGATTTTGGGGGAACATGGCGACTCAAGTGTGGCTGTGTGGAGTGGCGTGAATGTGGCAGGTGTTTCTCTCCAAGAATTGAATCCAGAAATGGGAACGGACAATGATAGTGAAAATTGGAAGGAAGTGCATAAGATGGTGGTTGAAAGTGCCTATGAAGTCATCAAGCTAAAAGGATATACCAACTGGGCTATTGGATTAAGTGTGGCTGATCTTATTGAATCCATGTTGAAAAATCTATCCAGGATTCATCCGGTGTCAACAATGGTAAAGGGGATGTATGGCATCGAGAATGAAGTCTTCCTGAGCCTTCCATGTATCCTCAATGCCCGAGGATTAACCAGCGTTATCAACCAGAAGCTAAAGGATGATGAAGTTGCTCAGCTCAAGAAAAGTGCGGATACCCTGTGGGACATCCAGAAGGACCTAAAAGACCTGTGACTACTGGGCTCTAGGCTATAGAAATTTTAAAACTACAATGTTATTAACTCTGAGCCTTTAGTTTTCATCTGTGTACATGGATCGCAGTTTGCTTTGATCTTCTTCAATATGTGAATTTGGGCTCATAGAATCAAAGCCTATGCTTGGTTTAATGCTTGCAATATGAGCTCTTGAACAAATAAAATTAACTATTGTAGTGTA
>NM_001320086.1
CCTCCTCCCTCCTTGCAGAGCCGGCGCCGGAGGAGACGCACGCAGCTCACATTGTGTTCTCCGCACTGCTGTTACTGAGGTCTCCAGCGCCTTCTCCCTCCTGTGTAAAATGGCAACTCTTAAGGAAAAACTCATTGCACCAGTTGCGGAAGAAGAGGCAACAGTCCCAAACAATAAGATCACTGTAGTGGGTGTTGGACAAGTTGGTATGGCGTGTGCTATCAGCATTCTGGGAAAGTCTCTGGCTGATGAACTTGCTCTTGTGGATGTTTTGGAAGATAAGCTTAAAGGAGAAATGATGGATCTGCAGCATGGGAGCTTATTTCTTCAGACGCCTAAAATTGTGGCAGATAAAGATTATTCTGTGACTGCCAATTCCAAGATTGTAGTGGTAACTGCAGGAGTCCGTCAGCAAGAAGGGGAGAGTCGGCTCAATCTGGTGCAGAGAAATGTTAATGTCTTCAAATTCATTATTCCTCAGATTGTCAAGTACAGTCCTGATTGCATCATAATTGTGGTTTCCAACCCAGTGGACATTCTTACATATGTTACCTGGAAACTAAGTGGATTACCCAAACACCGCGTGATTGGAAGTGGATGTAATCTGGATTCTGCTAGATTTCGCTACCTTATGGCTGAAAAACTTGGCATTCATCCCAGCAGCTGCCATGGATGGATTTTGGGGGAACATGGCGACTCAAGTGTGGCTGTGTGGAGTGGCGTGAATGTGGCAGGTGTTTCTCTCCAAGAATTGAATCCAGAAATGGGAACGGACAATGATAGTGAAAATTGGAAGGAAGTGCATAAGATGGTGGTTGAAAGTGCCTATGAAGTCATCAAGCTAAAAGGATATACCAACTGGGCTATTGGATTAAGTGTGGCTGATCTTATTGAATCCATGTTGAAAAATCTATCCAGGATTCATCCGGTGTCAACAATGGTAAAGGGGATGTATGGCATCGAGAATGAAGTCTTCCTGAGCCTTCCATGTATCCTCAATGCCCGAGGATTAACCAGCGTTATCAACCAGAAGCTAAAGGATGATGAAGTTGCTCAGCTCAAGAAAAGTGCGGATACCCTGTGGGACATCCAGAAGGACCTAAAAGACCTGTGACTACTGGGCTCTAGGCTATAGAAATTTTAAAACTACAATGTTATTAACTCTGAGCCTTTAGTTTTCATCTGTGTACATGGATCGCAGTTTGCTTTGATCTTCTTCAATATGTGAATTTGGGCTCATAGAATCAAAGCCTATGCTTGGTTTAATGCTTGCAATATGAGCTCTTGAACAAATAAAATTAACTATTGTAGTGTA
>NM_001320089.1
CTGGACGATCTTTACCTCGAATATTTCAATCTACTACCAAGTGTAAAATGGCAACTCTTAAGGAAAAACTCATTGCACCAGTTGCGGAAGAAGAGGCAACAGTCCCAAACAATAAGATCACTGTAGTGGGTGTTGGACAAGTTGGTATGGCGTGTGCTATCAGCATTCTGGGAAAGTCTCTGGCTGATGAACTTGCTCTTGTGGATGTTTTGGAAGATAAGCTTAAAGGAGAAATGATGGATCTGCAGCATGGGAGCTTATTTCTTCAGACGCCTAAAATTGTGGCAGATAAAGATTATTCTGTGACTGCCAATTCCAAGATTGTAGTGGTAACTGCAGGAGTCCGTCAGCAAGAAGGGGAGAGTCGGCTCAATCTGGTGCAGAGAAATGTTAATGTCTTCAAATTCATTATTCCTCAGATTGTCAAGTACAGTCCTGATTGCATCATAATTGTGGTTTCCAACCCAGTGGACATTCTTACATATGTTACCTGGAAACTAAGTGGATTACCCAAACACCGCGTGATTGGAAGTGGATGTAATCTGGATTCTGCTAGATTTCGCTACCTTATGGCTGAAAAACTTGGCATTCATCCCAGCAGCTGCCATGGATGGATTTTGGGGGAACATGGCGACTCAAGTGTGGCTGTGTGGAGTGGCGTGAATGTGGCAGGTGTTTCTCTCCAAGAATTGAATCCAGAAATGGGAACGGACAATGATAGTGAAAATTGGAAGGAAGTGCATAAGATGGTGGTTGAAAGTGCCTATGAAGTCATCAAGCTAAAAGGATATACCAACTGGGCTATTGGATTAAGTGTGGCTGATCTTATTGAATCCATGTTGAAAAATCTATCCAGGATTCATCCGGTGTCAACAATGGTAAAGGGGATGTATGGCATCGAGAATGAAGTCTTCCTGAGCCTTCCATGTATCCTCAATGCCCGAGGATTAACCAGCGTTATCAACCAGAAGCTAAAGGATGATGAAGTTGCTCAGCTCAAGAAAAGTGCGGATACCCTGTGGGACATCCAGAAGGACCTAAAAGACCTGTGACTACTGGGCTCTAGGCTATAGAAATTTTAAAACTACAATGTTATTAACTCTGAGCCTTTAGTTTTCATCTGTGTACATGGATCGCAGTTTGCTTTGATCTTCTTCAATATGTGAATTTGGGCTCATAGAATCAAAGCCTATGCTTGGTTTAATGCTTGCAATATGAGCTCTTGAACAAATAAAATTAACTATTGTAGTGTA