Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Prpf3
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name pre-mRNA processing factor 3
Also known as 3632413F13Rik
Coordinate chr3:95737436-95763197
Strand -
Gene summary Predicted to enable identical protein binding activity. Predicted to be involved in spliceosomal tri-snRNP complex assembly. Predicted to act upstream of or within RNA splicing and mRNA processing. Predicted to be located in Cajal body; cytosol; and nuclear speck. Predicted to be part of U2-type precatalytic spliceosome and U4/U6 x U5 tri-snRNP complex. Is expressed in central nervous system; genitourinary system; gut gland; heart; and sensory organ. Used to study retinitis pigmentosa 18. Human ortholog(s) of this gene implicated in retinitis pigmentosa and retinitis pigmentosa 18. Orthologous to human PRPF3 (pre-mRNA processing factor 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Prpf3

Retroname Coord Strand Genomic Region ENSG
Prpf3P2 chr4:8672441-8673731 - Intergenic
 ENSMUSG00000082122 UCSC
Prpf3P1 chr1:33411045-33412859 + Intergenic
 ENSMUSG00000101612 UCSC

Expression

Transcript Sequences

>NM_001316751.2
GCCTTCCGTAGTCACGTGCCGTAGGGACCGCAGCGTGGCGGTGTGTGGCGGTAGCGACGGCGGGCCGTAGGGCAACCGGAAGGTTTCCGGTTCCGGTGTAACGTTCGGGCTCCGTCTCAGGGGCTGAAGTTTGTGAGGTGTAGTTTTTTTGTCCCATTGGAGCTCTCATTCTCCATTTTCTCCGAAATGGCGCTGTCTAAGCGGGAGCTGGATGAGCTGAAGCCATGGATAGAGAAGACGGTGAAGAGAGTGCTGGGCTTCTCAGAGCCCACAGTGGTCACTGCAGCCTTGAACTGTGTGGGGAAGGGCATGGACAAAAAGAAGGCGGCTGATCACCTGAAACCTTTTCTTGATGATTCCACTCTCCGATTTGTGGATAAGCTGTTTGAGGCTGTGGAGGAAGGCCGAAGCTCAAGGCATTCCAAGTCTAGCAGTGACAGAAGCAGAAAGCGAGAGTTAAAGGAGGTGTTTGGTGATGACTCTGAGATCTCAAAGGAATCATCGGGGGTAAAGAAGCGGCGGATACCCCGTTTTGAGGAGGTAGAAGAGGAGCCAGAGGTGATCCCTGGACCTCCATCAGAAAGCCCTGGCATGCTAACAAAGCTCCAGATCAAACAGATGATGGAAGCAGCAACACGACAAATCGAGGAACGGAAAAAACAGCTGAGCTTCATCAGCCCCCCTGCACCTCAGCCAAAGACACCTTCTTCTTCCCAACCAGAGCGACTTCCCATCGGCAACACTATTCAGCCCTCCCAGGCCGCTACCTTTATGAACGATGCCATTGAGAAGGCGAGGAAAGCTGCCGAGCTGCAAGCCCGAATCCAGGCCCAGCTGGCGTTGAAGCCAGGGCTTATTGGCAATGCCAACATGGTGGGCCTAGCTAATCTCCATGCCATGGGCATAGCTCCACCgaaaGTAGAGTTAAAAGACCAAACTAAGCCTACCCCATTGATCCTGGACGAGCAAGGCCGCACTGTGGATGCGACAGGCAAGGAGGTGGAGCTCACACATCGCATGCCCACCCTGAAGGCAAACATTCGGGCTGTGAAGAGGGAACAGTTcaagcagcagctaaaagaaaaGCCATCAGAAGACATGGAGTCTAATACCTTTTTTGACCCCCGAGTCTCAATTGCCCCTTCCCAGCGCCAAAGACGCACTTTTAAATTCCATGACAAGGGCAAATTTGAGAAAATTGCTCAACGATTACGGACAAAGGCTCAATTGGAGAAGCTGCAAGCAGAGATTTCACAAGCTGCTAGAAAAACAGGCATTCATACTTCGACTAGACTTGCCCTCATTGCTCCCAAAAAGGAGCTAAAGGAAGGCGATATCCCTGAGATTGAGTGGTGGGACTCGTACATCATACCCAACGGCTTTGACCTTACAGAGGAAAATCCCAAGAGAGAAGATTATTTTGGAATCACAAATCTTGTTGAACATCCAGCCCAGCTTAATCCTCCAGttgACAATGATACACCAGTTACCCTTGGGGTATATCTTACGAAGAAGGAGCAGAAGAAACTACGGAGGCAAACAAGAAGGGAAGCACAGAAAGAGCTACAAGAGAAAGTCAGGCTAGGCCTGACACCTCCTCCAGAGCCCAAAGTGAGAATCTCAAATTTAATGCGAGTATTAGGAACAGAAGCAGTTCAAGACCCTACAAAGGTAGAAGCCCATGTCAGAGCTCAGATGGCAAAGAGACAGAAAGCGCATGAAGAGGCCAACGCGGCCCGAAAACTTACAGCAGAACAGAGAAAggtcaagaaaattaaaaagcttaAAGAAGACATTTCACAGGGGGTGCACATATCTGTGTATAGAGTTCGAAATTTGAGCAACCCAGCCAAGAAGTTCAAGATTGAGGCCAATGCTGGGCAGCTGTACCTGACAGGGGTGGTGGTGCTGCACAAAGATGTCAACGTGGTGGTAGTGGAAGGGGGCCCCAAAGCCCAGAAGAAATTTAAGCGTCTCATGCTACATCGGATAAAGTGGGATGAGCAGACATCTAACACGAAGGGAGATGATGATGAGGAATCTGATGAAGAAGCTGTGAAGAAAACTAACAAATGTGTACTAGTATGGGAGGGTACAGCCAAAGACCGGAGCTTTGGAGAGATGAAGTTTAAACAGTGCCCTACAGAGAACATGGCTCGTGAGCATTTCAAAAAGCATGGGGCTGAACACTACTGGGACCTTGCACTGAGTGAATCTGTGTTGGAGTCCACCGACTGAGACTACTGTTAGCCCTTGTATCTTCTTTGCCTttgtttcttctgtcttctcactCTACTTCCCAACCTTACCCCACCGTGCGTGTGATCTCAGAACTGTGCCAGGCCGATACCAGGGCAAAAAGACTACCAAGTTCACCCAGTCAGCCTGGTGCTACCCTCCATCCTGTATGTGCATATGAttaaagagttatttttaaaattagtatgaTATTTTTCATATGGTCATAGATAttagaatttggttttgtgggtGATTTTTCCATATTCCTAGGATCCTAGTAGTTTAAGTGTGTAAATGTCTGACTTCTAAGCAAATGGTAAGTACAGTTTTCTGGAGATAGTAAGTCAGAAAGTAGTGTTAAGTGGTTGTGGGATGAGTGGCCAAATGCAGTATGTATTTCTTAACCTTTATAGCTAGAATAATAAGGTCATATGTTGTTGGTTTCTTTAGGTCAAGTCCTAGGAAATTAGTTCTTCAAATGGGTATGGCTATTTTGATTGAAATAGACTACATACTATCCAAGGGCATCAGTTTGTAAACTAAGACAGGAATCAGTAATGTAGTTCAATTTCCACTGTTAATGATGCCATGTGACTCCTCTCAGCGATATGCTGAATAACCTTTTAAGAAGATTTAAGATAGGCTGtcatggccgggcgtggtggcgcacgcctttaatcccagcactcagg
>NM_027541.5
GTGAGGTGAGTAGTGGCCCCGCGCCCGAAAGGCTGTAGCCTTCGGTGCGAGCGGCTGGACAGGGCGGGAGTGCTCGGCGGGAAGCAGGCTGGGAGGACTCCCTGGTTCTGTCCGGGGAAGAAGTCAGAATGGGCTGGCTGAAGGCAAAGGGCGGGGGCGGGAAGCAGCAGGGTGGGCAAACCTGCCCTGAGGTGAGGAGTTAGCGCGGACTCGGTGGGGCCGGGGCCAGGTGGGAAGATAGCAAAGACCGGAGCATGGGGTTCCAGGGGCTTGTAGCGTAGAAAAGTAAGGAATCCCTTCGGAAGATGAGATTCTGCTACCTGCTCATTCAGAAGACAGCgttctgcctccctccccttccccttccccttcccctccaccccccagccccccaccgaCGCTGACGCCCCCTCGCTATTAGAGTTGAACATCTGGTGTAGTTTTTTTGTCCCATTGGAGCTCTCATTCTCCATTTTCTCCGAAATGGCGCTGTCTAAGCGGGAGCTGGATGAGCTGAAGCCATGGATAGAGAAGACGGTGAAGAGAGTGCTGGGCTTCTCAGAGCCCACAGTGGTCACTGCAGCCTTGAACTGTGTGGGGAAGGGCATGGACAAAAAGAAGGCGGCTGATCACCTGAAACCTTTTCTTGATGATTCCACTCTCCGATTTGTGGATAAGCTGTTTGAGGCTGTGGAGGAAGGCCGAAGCTCAAGGCATTCCAAGTCTAGCAGTGACAGAAGCAGAAAGCGAGAGTTAAAGGAGGTGTTTGGTGATGACTCTGAGATCTCAAAGGAATCATCGGGGGTAAAGAAGCGGCGGATACCCCGTTTTGAGGAGGTAGAAGAGGAGCCAGAGGTGATCCCTGGACCTCCATCAGAAAGCCCTGGCATGCTAACAAAGCTCCAGATCAAACAGATGATGGAAGCAGCAACACGACAAATCGAGGAACGGAAAAAACAGCTGAGCTTCATCAGCCCCCCTGCACCTCAGCCAAAGACACCTTCTTCTTCCCAACCAGAGCGACTTCCCATCGGCAACACTATTCAGCCCTCCCAGGCCGCTACCTTTATGAACGATGCCATTGAGAAGGCGAGGAAAGCTGCCGAGCTGCAAGCCCGAATCCAGGCCCAGCTGGCGTTGAAGCCAGGGCTTATTGGCAATGCCAACATGGTGGGCCTAGCTAATCTCCATGCCATGGGCATAGCTCCACCgaaaGTAGAGTTAAAAGACCAAACTAAGCCTACCCCATTGATCCTGGACGAGCAAGGCCGCACTGTGGATGCGACAGGCAAGGAGGTGGAGCTCACACATCGCATGCCCACCCTGAAGGCAAACATTCGGGCTGTGAAGAGGGAACAGTTcaagcagcagctaaaagaaaaGCCATCAGAAGACATGGAGTCTAATACCTTTTTTGACCCCCGAGTCTCAATTGCCCCTTCCCAGCGCCAAAGACGCACTTTTAAATTCCATGACAAGGGCAAATTTGAGAAAATTGCTCAACGATTACGGACAAAGGCTCAATTGGAGAAGCTGCAAGCAGAGATTTCACAAGCTGCTAGAAAAACAGGCATTCATACTTCGACTAGACTTGCCCTCATTGCTCCCAAAAAGGAGCTAAAGGAAGGCGATATCCCTGAGATTGAGTGGTGGGACTCGTACATCATACCCAACGGCTTTGACCTTACAGAGGAAAATCCCAAGAGAGAAGATTATTTTGGAATCACAAATCTTGTTGAACATCCAGCCCAGCTTAATCCTCCAGttgACAATGATACACCAGTTACCCTTGGGGTATATCTTACGAAGAAGGAGCAGAAGAAACTACGGAGGCAAACAAGAAGGGAAGCACAGAAAGAGCTACAAGAGAAAGTCAGGCTAGGCCTGACACCTCCTCCAGAGCCCAAAGTGAGAATCTCAAATTTAATGCGAGTATTAGGAACAGAAGCAGTTCAAGACCCTACAAAGGTAGAAGCCCATGTCAGAGCTCAGATGGCAAAGAGACAGAAAGCGCATGAAGAGGCCAACGCGGCCCGAAAACTTACAGCAGAACAGAGAAAggtcaagaaaattaaaaagcttaAAGAAGACATTTCACAGGGGGTGCACATATCTGTGTATAGAGTTCGAAATTTGAGCAACCCAGCCAAGAAGTTCAAGATTGAGGCCAATGCTGGGCAGCTGTACCTGACAGGGGTGGTGGTGCTGCACAAAGATGTCAACGTGGTGGTAGTGGAAGGGGGCCCCAAAGCCCAGAAGAAATTTAAGCGTCTCATGCTACATCGGATAAAGTGGGATGAGCAGACATCTAACACGAAGGGAGATGATGATGAGGAATCTGATGAAGAAGCTGTGAAGAAAACTAACAAATGTGTACTAGTATGGGAGGGTACAGCCAAAGACCGGAGCTTTGGAGAGATGAAGTTTAAACAGTGCCCTACAGAGAACATGGCTCGTGAGCATTTCAAAAAGCATGGGGCTGAACACTACTGGGACCTTGCACTGAGTGAATCTGTGTTGGAGTCCACCGACTGAGACTACTGTTAGCCCTTGTATCTTCTTTGCCTttgtttcttctgtcttctcactCTACTTCCCAACCTTACCCCACCGTGCGTGTGATCTCAGAACTGTGCCAGGCCGATACCAGGGCAAAAAGACTACCAAGTTCACCCAGTCAGCCTGGTGCTACCCTCCATCCTGTATGTGCATATGAttaaagagttatttttaaaattagtatgaTATTTTTCATATGGTCATAGATAttagaatttggttttgtgggtGATTTTTCCATATTCCTAGGATCCTAGTAGTTTAAGTGTGTAAATGTCTGACTTCTAAGCAAATGGTAAGTACAGTTTTCTGGAGATAGTAAGTCAGAAAGTAGTGTTAAGTGGTTGTGGGATGAGTGGCCAAATGCAGTATGTATTTCTTAACCTTTATAGCTAGAATAATAAGGTCATATGTTGTTGGTTTCTTTAGGTCAAGTCCTAGGAAATTAGTTCTTCAAATGGGTATGGCTATTTTGATTGAAATAGACTACATACTATCCAAGGGCATCAGTTTGTAAACTAAGACAGGAATCAGTAATGTAGTTCAATTTCCACTGTTAATGATGCCATGTGACTCCTCTCAGCGATATGCTGAATAACCTTTTAAGAAGATTTAAGATAGGCTGtcatggccgggcgtggtggcgcacgcctttaatcccagcactcagg