Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Hmgxb4
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name HMG box domain containing 4
Also known as 4733401K04Rik|Hmgb2l1
Coordinate chr8:75720262-75758606
Strand +
Gene summary Predicted to enable identical protein binding activity. Predicted to be part of NURF complex. Is expressed in several structures, including brain; early conceptus; gonad; thymus; and ureter. Orthologous to human HMGXB4 (HMG-box containing 4). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Hmgxb4

Retroname Coord Strand Genomic Region ENSG
Hmgxb4P1 chr1:54605759-54606832 + Intergenic
 ENSMUSG00000101130 UCSC
Hmgxb4P2 chr2:138756941-138758851 - Intergenic
 ENSMUSG00000082526 UCSC

Expression

Transcript Sequences

>NM_001316754.1
TTTGTTCTTGGCTCTTTTGTACCAGCTTCCTCCTTTGTAGGTAGCCAGTGTTACTAAAGGACTGGTTACCTGAAGTTGTCTGGGCACTTCTACGGAACCTGGAAAGATTATTTCAAACATCCACCAGCTGAGAGCTACTGTCTTCCACCTCCTTGGAGCTGCGTTCGTGGCCAGTTGTCTGAATGCCGAAAAAGAAGAACATGTCTGCCTACCAGGTATTCTGTAAGGAGTACCGGGTAACCATTGTGGCTGACCATCCAGGTATAGATTTTGGGGAACTTAGTAAAAAATTGGCTGAAGTATGGAAGCAGTTGCCAGAAAAAGACAAACTGATCTGGAAGCAAAAGGCTCAGTATCTGCAGCACAAACAGAACAAAGCTGAAGCCACAACTGTGAAGAGAAAAGCATCCAGCGCAGAAGGTTCCATGAAAGTCAGAGCCTCTTCTGTAGGAGTACTGTCACCCCAAAAGAAGTCCCCACCCACCACAATGCTTTTGCCAGCCTCACCAGCCAAAGCTCCTGAAACAGAGCCCATTGATGTCGCTGCTCATCTCCAGTTGCTGGGAGAGTCCCTCAGCCTCATTGGACACCGCCTacaggagacagagggcatggtggcagtgTCTGGAAGCTTGTCAGTGCTCCTAGATTCCATTATCTGTGCTCTTGGCCCTCTGGCATGCCTGACCACACAACTACCTGAACTGAACGGCTGTCCTAAACAGGTcttgTCAAACACGCTGGACAACATTGCATACATTATGCCTGGACTGTGACTTCCAAGACGCCTGGGACAGAAGACTGTCTACCCCTTCGCTAGTCTATGTATAGATGACTGTTCCAGACCCTCCACTGACCTCTGGGTgtaggttttaaatttttataatctatatatacgtatataatgTACAGTATATACATAGGATATAACTACTttgcttttaataattttatgaaatGGCAAAGGTTTAGCTAAAAGGAAACTTTAGCATGAATGTGGGCTTGGAATTatttttttgtgaaaaaaaaatctgccttaaaaaaaatcagtgtaatTTGGGGACTAGGGGCTTATTCTGGGTGCCATGTATATCTCCTCATAGACTgctaaaatgtgattttttttttttttccaagcttgGGTTTACCTCCAGACCCATCACTGACCATTTGCCTTACCTGTCTTATAATCAGAAATGTAGTAAAGATCTTGGGAGGAGGCCAGCTGACTACAAACTTTTGGACATGGAGTAACCTGGGTGGGGAGGTGGAGCTTAGGTGGACTGGGTAGGGGACTCATTCCAATTCCTACTAAAGAGATACCTGTGTCTCCAGTTTTATTGTAACCACGGTTCCACAGAGTCATCGGTACCATCTATAGCCTCAGCTATGTGATTCTTGGCAGCAGAGAAATAAATACCTTGCAGAAACCAAAGCTGTTGGTGCCACCTGTTGAACCTGCTTGTCTGGCCAGCAAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCAACAAATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTGGTTCTTGGTTCAGCTCTGGTTCCCCTGGTGGGTACATTGTGCTCTGCATTCCACACAGAGCTGGATCACAAAGAAGTTCTTGGTTCTCAGGAGGGTTATCTATATGTGCGTGTgagtgtatattttaattatgtgtatttaaCTCTTTAGAATTTCTTAGATTTTAATTTATCCTGTAAATTtctgtatatataatttaataacaaGCCTCCACCAGCAGGAGCATGTGGAGCATACAGATTTGTCATTTCTTAATGTCTGTCTAAAAGCTCCAAGACGTCCATATGTTAAGGTGTTGTGACTCAGAAAGGAACTTCATGGCCCTCAATAATGTTAGGAAAGTGAAATAGAAAGGAATGTCACCATTCCTAATTTCCCTTATTCCCAAAGACCCAGACCTGCTTCCCCATTAGAGAGAAGATAGCTGAGTGCTCCAGGGTTGCTTGGGAACTCGGTGAGAGATTCCCTTCCCTGCCAAAACCAAGCTGAGTTAATAACCATGCTTTCTTCTAATGGCCTGGATGGAACGAGGCAGCATCACAGTAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGAACTCCTTCCCATAGCCCGACTGCTGTCACAGCTAAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGAAATAGGGAAAGGAACAGAAATATGTGGGAACTGAAATCAAGCAGAGCAGAAATTTCCATTTGAGTTAACATGTCAGAACCTCATTTGACCCTGCAGAAGTTTCCTGTGAGAAATGGTATCAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATTGCCCTTGCTACAGACAGTAGTGAACTCCTAAGGAGAACCGGCTTTTTCGGGTTTGTTTTCCTCTGAAGCCTAGCCCTGTTGTATTTGTATTAAAGATTTGTACACATTTGTATAATAATCTGTACCTTGTGGTATTTGGTACTATTAGAGGAAAAATTTTGGATTCAGGCCTTCTTGCTGTTTTtatatcattgttttattttgtttttttaaataaatcctaGTGGTTTGATCCAAATCCTATTACAGTTGTATAAAGAAACAATATTTTGTACTTATATTAAAGatctcatttttaatatttata
>NM_178017.2
GGCTCGACTGAGGCGCCCTTGTTGCTCGcgcttttctctccttctccaagATGGCGGCCGTCGGCGGCGCTGAGGCGGGATCCGAGCGAGCCGAGTGAAGACCTGGTCCTGTAGACGGGAAGGAGCCTGGACACAGTGACACAACACATTCTCAAAGGCCCTGCAGGACCACCATGGCTTATGATGACTCCATGAAGAAAGAAGATTGCTTTGATGGTGATCACAGCTTTGAGGACATAGGACTTGCAGCTGGCCGAAGCCAACGAGAAAAGAAGCGGTCTTACAAAGACTTCttaagggaagaggaagaagtcgCCGCGCAGGTCAGGAGCTCTTCCAAGAAGAAGTCAAAGGACAGTGATTTGTTCTTCTTGGGGACGGACACAcacaagaagaagaggaagcacTCCCCTGACGATTACTACTATGGAGACATTTCGACTTTGGAATcatcacagaagaaaaagaagaagtctAGCCCACAGTCTCCGGACACAGCAATGGACCTGTTGAAAGCTATCACCTCCCCACTGGCAGCGGGTGCCAAGTCCTCTAAGAAGGCAGGGGAGAAATCCTCCAGCTCTTCAAGCCATCCAGAGAGCAGGAAGGAGCACCACAAGAAGAAGGGCAATGGCAGCAGTGGAGAGCTCTCCCTGGATGACAGCAATGCCCACAAATCCAAAAAGATGAAGCCACTCTATGTGAACACAGAGACACTGACTCTTCGTGAGCCAGATGGCTTAAAGATGAAACTCATTCTCTCACCAAAGGAGAAGGGAAgcagctcagtggaagaggaggCTTTTCAGTACCCTGCCCAACAAGCTTCGCTGAAGAAGCCCTCGAAGAAACTAGCTCGGGACGAGCAAGGTGCTTTACTCCTAGGGCACGAGCTACAGAGCCTCCTGAAAACGGCCCGGAAGAAGCACAAGTCATCCTCAGACTCACACTCCTCTCCTGGCCCAGAAGGCTGTGGGTCTGACGTCTCCCAGCTTCCAGAACCCCACAGTGCCAATCTCGACATCACAGGGCTTGACCCAATTCTAGTAGAGTCCGAATCGTCCTCAGCTGGGGAGCTGGAGGCCGGGGAGCTGGTGATAGATGACTCTTACAGGGagatcaagaagaagaagaagtcaaaaaagagcaaaaagaagaaggacaaagacagacacaaggaGAAGCGGCACTCCCGGACCaagagaagctctgccagagagCACGGTACTGCTCGGGAGCACGGGCTGATACCTGGCCCTGCCTCCAGTGTCCCCACCCTGCCACTTCCTGCTCTACACACAGATGGACacggggagaagaaaaagaaaagggaagacaaagacagagacagagagaggggagaaaagCCGAAAAAGAAGAACATGTCTGCCTACCAGGTATTCTGTAAGGAGTACCGGGTAACCATTGTGGCTGACCATCCAGGTATAGATTTTGGGGAACTTAGTAAAAAATTGGCTGAAGTATGGAAGCAGTTGCCAGAAAAAGACAAACTGATCTGGAAGCAAAAGGCTCAGTATCTGCAGCACAAACAGAACAAAGCTGAAGCCACAACTGTGAAGAGAAAAGCATCCAGCGCAGAAGGTTCCATGAAAGTCAGAGCCTCTTCTGTAGGAGTACTGTCACCCCAAAAGAAGTCCCCACCCACCACAATGCTTTTGCCAGCCTCACCAGCCAAAGCTCCTGAAACAGAGCCCATTGATGTCGCTGCTCATCTCCAGTTGCTGGGAGAGTCCCTCAGCCTCATTGGACACCGCCTacaggagacagagggcatggtggcagtgTCTGGAAGCTTGTCAGTGCTCCTAGATTCCATTATCTGTGCTCTTGGCCCTCTGGCATGCCTGACCACACAACTACCTGAACTGAACGGCTGTCCTAAACAGGTcttgTCAAACACGCTGGACAACATTGCATACATTATGCCTGGACTGTGACTTCCAAGACGCCTGGGACAGAAGACTGTCTACCCCTTCGCTAGTCTATGTATAGATGACTGTTCCAGACCCTCCACTGACCTCTGGGTgtaggttttaaatttttataatctatatatacgtatataatgTACAGTATATACATAGGATATAACTACTttgcttttaataattttatgaaatGGCAAAGGTTTAGCTAAAAGGAAACTTTAGCATGAATGTGGGCTTGGAATTatttttttgtgaaaaaaaaatctgccttaaaaaaaatcagtgtaatTTGGGGACTAGGGGCTTATTCTGGGTGCCATGTATATCTCCTCATAGACTgctaaaatgtgattttttttttttttccaagcttgGGTTTACCTCCAGACCCATCACTGACCATTTGCCTTACCTGTCTTATAATCAGAAATGTAGTAAAGATCTTGGGAGGAGGCCAGCTGACTACAAACTTTTGGACATGGAGTAACCTGGGTGGGGAGGTGGAGCTTAGGTGGACTGGGTAGGGGACTCATTCCAATTCCTACTAAAGAGATACCTGTGTCTCCAGTTTTATTGTAACCACGGTTCCACAGAGTCATCGGTACCATCTATAGCCTCAGCTATGTGATTCTTGGCAGCAGAGAAATAAATACCTTGCAGAAACCAAAGCTGTTGGTGCCACCTGTTGAACCTGCTTGTCTGGCCAGCAAGGCTTGGTGTATAAAAACCAAAGCTGCCATCTTCCACTAGCAGCATTGGTTGCCCAACAAATCCTGAGGATTCTGCTGCTTAGCTGTTTGGTGGTTCTTGGTTCAGCTCTGGTTCCCCTGGTGGGTACATTGTGCTCTGCATTCCACACAGAGCTGGATCACAAAGAAGTTCTTGGTTCTCAGGAGGGTTATCTATATGTGCGTGTgagtgtatattttaattatgtgtatttaaCTCTTTAGAATTTCTTAGATTTTAATTTATCCTGTAAATTtctgtatatataatttaataacaaGCCTCCACCAGCAGGAGCATGTGGAGCATACAGATTTGTCATTTCTTAATGTCTGTCTAAAAGCTCCAAGACGTCCATATGTTAAGGTGTTGTGACTCAGAAAGGAACTTCATGGCCCTCAATAATGTTAGGAAAGTGAAATAGAAAGGAATGTCACCATTCCTAATTTCCCTTATTCCCAAAGACCCAGACCTGCTTCCCCATTAGAGAGAAGATAGCTGAGTGCTCCAGGGTTGCTTGGGAACTCGGTGAGAGATTCCCTTCCCTGCCAAAACCAAGCTGAGTTAATAACCATGCTTTCTTCTAATGGCCTGGATGGAACGAGGCAGCATCACAGTAAACCTTTGGGGACCATGTAGCCAGCTGGCATCCTAGGGAACTCCTTCCCATAGCCCGACTGCTGTCACAGCTAAGCTTCTCACAGGACTGTGTCAGCTCAGAGCAGTTTTGAGATTTAATCTGAGAAATAGGGAAAGGAACAGAAATATGTGGGAACTGAAATCAAGCAGAGCAGAAATTTCCATTTGAGTTAACATGTCAGAACCTCATTTGACCCTGCAGAAGTTTCCTGTGAGAAATGGTATCAAGGAGAGGCCAGGGAAGACATGTGTGGTAGAGGAAGCAGCCAGTCCTCCATTGCCCTTGCTACAGACAGTAGTGAACTCCTAAGGAGAACCGGCTTTTTCGGGTTTGTTTTCCTCTGAAGCCTAGCCCTGTTGTATTTGTATTAAAGATTTGTACACATTTGTATAATAATCTGTACCTTGTGGTATTTGGTACTATTAGAGGAAAAATTTTGGATTCAGGCCTTCTTGCTGTTTTtatatcattgttttattttgtttttttaaataaatcctaGTGGTTTGATCCAAATCCTATTACAGTTGTATAAAGAAACAATATTTTGTACTTATATTAAAGatctcatttttaatatttata