Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Pogk
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name pogo transposable element with KRAB domain
Also known as 9130401E23Rik|BASS2|mKIAA1513
Coordinate chr1:166217895-166237427
Strand -
Gene summary Predicted to enable DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be located in nucleoplasm. Predicted to be active in nucleus. Orthologous to human POGK (pogo transposable element derived with KRAB domain). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pogk

Retroname Coord Strand Genomic Region ENSG
PogkP1 chr5:60831322-60835198 + Intergenic
ENSMUSG00000105486 UCSC

Expression

Transcript Sequences

>NM_175170.4
gTGTCCTCGCTCCCTCCCGAGGGGCCGCGCTGGGGCGGCGGGAGCGGTGGAGACGATGGCGCGGTGAATGCCGGGCCACAGCCTTCGTCGCCCTTTGCGGCGACGCCGCCCGCTCGGCCGGGAAACATTGAAGAAGCTGACTCTGAACTCCGGGAAGATCCTTGCTTGGGAAGTCCCGGGAAATGGAGCTCACAGATGCACACTCTCTGCATACCCAGCAGCTGCCCGCAGTCTCTTCTGGGGAACCTCTTTGTACCAGCCTGAGGAGGCTTCGAATAGAGAGGATTTGCGACCCAGAGGCGAGGAGAAGTCCAGCCAGGTTTGggttggcctctgccacccaggcACGCCCCTCTCTGCATCATGGACTTGGCTTTGGGAGGTCCTTTGAGGCAGAAAAACTGTTAAGTTTCTGAAGTAGCTTGTGGACAGCGCCTATGAATCTGGAAAACCCAGAAATGGAGTCCCGGGCCTACCCTCTGAATTTGACCCTGAAAGAAGAGCAAAAGGAGGAAGAGGTTGAGATCCAAGAGTTGGAGGATGGCCCCATAGATATGCAGAAAGTACAAATCTGCTCAGAAGGCGCATGGGTACCAGCTCTATTTGATGAGGTGGCCATATATTTCTCAGATGAGGAGTGGGAAGTTCTGACAGAGCAACAAAAAGCCCTCTACCGGGAAGTCATGAGGATGAATTATGAGACTGTCCTGTCCCTGGAATTCCCATTCCCCAAGCCAGATATGATCAATCGGTTGGAAAGGGACGAGGAGTGTCCTAATTCTGATGAGTGGCGGCTCCAGGGAGTAACCTTTGCAGaaaatgaagaaTCTGACTTTAGGACTCCAGATTGGGCAAGCCCGACGAATGCCACCTCCCATTTTCCTCAACCTCAGCCCTTCAACAGCTTTGGCCTGCGTCTGCCTCAGGACATCACTGAACTGCCTGAGTGGACTGAGGGCTACCCCTTCTATATGGCCATGGGCTTCCCCGGGTATGACCTCTCAGCTGACGACTTGGCGAGCAAGTTTCAGTTCAGTCGTGGCATGCGCCGCAGTTATGATGCAGGGTTCAAGCTGATGGTGGTGGAGTACGCCGAGAGCACCAACAACTGTCAGGCTGCCAAGCAGTTTGGGGTGTTGGAAAAAAATGTTCGAGACTGGCGCAAAGTGAAGCCACAGCTCCAAAATGCTCATGCCATGCGGCGGGCATTCCGAGGCCCCAAGAATGGAAGGTTTGCTCTGGTAGACCAGCGAGTGGCTGAGTATGTCAGATACATGCAGGCCAAAGGGGACCCTATCACTAGGGAGGCAATGCAGTTGAAAGCTCTTGAAATCGCCCAGGAAATGAACATTCCAGAGAAAGGGTTCAAGGCAAGTCTGGGCTGGTGTCGAAGAATGATGAGAAGGTATGACCTGTCTCTGAGGCATAAAGTGCCAGTCCCTCAACACCTGGCCGAGGACCTGACTGAAAAGCTTGTCACTTACCAGCAGAGTGTGCTGGCTCTGCGCAGGACACACGACTATGAAGTGGCCCAGATGGGCAATGCAGACGAGACGCCCATCTGCTTAGAAGTCCCCTCTAGAGTGACTGTTGACAACCAGGGCGAAAAGCCCATCTTGGTCAAGACACCAGGCAGGGAGAAATTGAGGATCACAGCCATGCTGGGGGTCTTGGCTGATGGGAGGAAGTTACCACCGTACATCATTTTGAGGGGAACATACATCCCCCCTGGGAAGTTTCCCAGTGGCATGGAGATCCGCTGCCACCGCTACGGATGGATGACTGAGGACTTGATGCAAGACTGGTTGGAAGTTGTGTGGAGACGGAGAACTGGAGCTGTGCCCAGACAGCGAGGGATGCTGATCCTGAATGGCTTCCGGTGCCATGCCACTGACTCTGTGAAGAGTTCCATGGAGAACATGAACACGGACATGGTGATCATCCCAGGGGGCCTGACCTCCCAGCTGCAGGTGCTGGATGTCGTTGTCTACAAGCCTCTGAACGACAGCGTTCGGGCCCAGTATTCCAACTGGCTTCTGGCTGGGAACCTGGCACTCAGCCCCACTGGAAATGCTAAGAAGCCCCCCCTGGGCCTCTTCCTGGAGTGGATCATGGTTGCATGGAACAGCATCTCAAGTGAATCAATTGTCCAGGGGTTCAGAAAGTGCCACATCTCCAGCAACTTAGAGGACGAAGGTGACGTCCTCTGGGAAATCGAGGGCGAGTTGCCCAAAGAACCGCCAAAAGAATGTGGTCCTGAAAGTGTGGCTGAGGGTGACTGAGAGGACTCAGGTAAACTGGTCAGTCAAAGATCCTGCACCATCACTGGTGCCCTGCTCATGGCTAGCACTTACCGTTTTTCTGGCCCTGAGTTTGTTCTTTTCACGTTCTCTTGAAATAAGCCTGCCGTGCCACAGTGTAGACGGCAGGCAGGTCATCAGCACTTTCTCCATCAGAAACAGATTTGTATTGTGTTTTATGGCCTGGATCCAGGAGTACTTTTATAATGGGTAAGATGAACAAGGAGCTGTCTGTCAGAACACCTCACATGAGAGCAGTCCCACTGCCAAGTTTCTTAGGCCTCTAGAACATAGTTCGACATTGTTTAGTTCACAAAAAGGTTGAAGAGACAACTTTCTTCTAAAATGCTGAACTTCAGGGCAGGGCTGTCTGCTCACATTACTTAACATAGTTGCACTGCCTTTTGCTGATCTGCAGGACCCTGGCCCAGGGAGAGAATGAAGTCAGCCTTTAGTATGGTAACCTCTAGGCCTCATCTCTGTGTCCTAGGGAGATTATTACCTCCATGCCCACCAGGGAGATGAtaatatgtattgtttgttttgtctagGGAATATTGAGAGTTTAAAATCTTGGTCTCATAGAAATTCAGTTATGGGGTGAGACGTTACAGTCAATTCCTGTTGCCAGCAGGTATCTGAAGGAAGATGTCTTTAAATTGGAACTTTGAAGGGCTGCAGagctggcttagcagttaagagcatgctATTCTtgcagtttggttcccagcacccacatcctgCAGCTTGACACCTGTAGCTCCGGTTTCAGGAGTCCAATGACCTCTTAGCCTCCTTTGACATCTGCAGTTAcatgcacagttacacacacacacacacacacacacacacacacacacacgtgtgtgtgacTAAAAGAAgccttgggctagagagatggctcagcagttaggagtgctTACCTTTCATCCTTGCAGAGGACTGGCATTTAGTTTCCAGCACCTGTATaacagctcacaaccagctgtacctccagttccagggcatcttatgacctcttctggcctctgccaggTCCTGCATACATATGATGCaggctcacacatatacacataaaattaaatctttcttATGAAATGAATCTGCACCAGAAATAGTACAATGAATACAGTTCGCGAGCCTAAGGTCATCAAGTGTACATGTAGGGAGTTGAGGAGGTGTGCAGAAGAAGAGCAACTTTGGAAAAAAGCAGGCGATCAGAGCCCACACTAGCAAAGGCCCAGAGCCCCTAAACACAAACTTTGAGCAAACAGGAGAAGGACCAGAGTAAGGGGCACATGGAAGGCAAACAGCAGGAAAATGGTCAGTTCTTTAATAGAAAACCTAAAATTAACatagctttcctttataaaagaaaaagtcaatTAGTGTACATTTTACTTGTCCCCCTAAGCCCACCGTGCAAGTGAAATGCTAGTAGAAATCCCCATGCCCCTGAGCTGTGTAAGCGCAGGCTCCTCGGTGGCGTGCACCACCTTCCTGTCTGAGCCCTAGGCTTCGGGGATAGTTCTCCACATGCCCCTACTCTCTGTAAAGCCTTGGATTCAGGCTCCCTTTCTGCTGACCACTCCGCTGCCCCTGTTGGATAGCAGACTTTGAGTTGGAGTTGTTTTATCCTTTCACattcttgcttttcatttttcacCTAAGTTAGAAAACATTTCAATTTCCTAAGCAATTTACCACTCCAGGAACCCAGTCAAAAACTGCCAGAAAAGGAAAAAGCAGAAAACCATGCTAAGCCACAGCTGTGCACATGGGTACATGCCACGTCTGCTCTTCCAGTTGTTAGGATCTTTGTACAGCTTCTGGGGGAAGTGATGGAGACAGACATGAACAAGATTCGGAAGACACAGGCATTAAACCACCTCCTGTTACAGAATAGTATACTGCTTTGTTAAAGACATCCAGACTGATTCCTACTCAGGTTCTCTCTGTTTTCCAGAAAATGGAACTGTGATGGAAACAGTTGGGAGGAAAACTTGTAAGAGGATGGCTGCAGAGGGACCAAAATGGGCAATGAGGCTCTCTGAGAATCCTAGGGGTGGACAGCATGAATACCTTATCAGACAGTCCCATCTACCACGTCCTGTCAGTGTCCGCCAAGTCTAGGACCCTTATGGTCAGTGACAAGAAAAGGAACttggtggcctgcttcttcctTCGGAGCTGTCTCCATCTGCCCAGATAGAAGCCTATAAACCCAATCGAGCAAAGGTGTTTTCTGGAGAACACGTTCTCACAccgagtgtgagtgagtgtgtgtgtaccttcACAGGTGCTTCAGTAGGAGCTGTTTCCACACAGGCCGAGACTACAGGAAAGCTTTTGTAAAGGCGTGTCACACGTGTACTCCTGCTACTTCCATGTCTCCTCACTGAGGGAATGAGATGTTAATAACCAAGTGGGACACAGGCTTGGTGCAGAAGATGGATTTTCTGTAGGTAAACTAGGTTAGGATGCAAGATAAAGACTAAGATAAATGATGTTGCAGATACCTTTCCAATCTGGCAGCTAGACCTTTCTAGGGTCTTATTTAATGAGCCAATTTTTTCTGTTGTCCTCTATGAGGCAGCCCTTGGTGCACAAGCCTTTGCTTTtcaggctgcctgcagaagactaAGTTCTCTCCCGTCTACACAGAACAGGGCCCACTGACTTGGttaatttctttaatatttttgtcAAAAGGGCAATGGGAGGGTTTGGGCCGTAAGCCACAGCTGCTGTTAGACTCCAACCATACAAGAGTAGGTATGAGTCACTGACAACTTCTACAGTAGTAATTTGCATTCCCATGTAAGTCAGCAGCTAAGAAAAACATTCCTTCAAAGCTATATGTTgtacaaaaattctaccagaaccTCATAGGCAAAGCCATTGCTAGCTCTGTCATTCCGAATACTCAGTCTAGCCACCAGGTTGCTGTGATCACAGTTCCTTCCTCTACTCGGCTCCTGTGGATTCTCAACGCTGTTCTCAGCATCTTCCCCAGTTTCTACTCAGGTTCTCCTGCTCCTGTTTGTCCTTCACATTTCTCGCTGTGTAACCAGTCATAAACCTGCGCAGTCTGTCAGAGTTCCACACACATGACCGTGATTTCTCACTGTGTAACCAGTCATAAACCTGCGCAGTCTGTCAGAGTTCCACACACATGACCGTGACTCCTGAGAACTCTGTGTACTGACACTGTTCCTCTTAGCTTTCTCTGTACCGTCTCGTCATCCCCGAGTGCCATCTAATTAAACCCTGTTCCTCTCCACGTTCTCATcaggtttggggtttgttttcttcctttggctGTCCTATTTCCAGACTCTTATTTTTCTTGCTTGAGAGCttaaaaaatattatgtttaGGTTTCCACACAAAAGACAGTTATCTTAAGAGTAGaaaataagccgggcagtggtggcgcacgcctttaatcccagcacttgggagacatatctctgagttcgaggacagccagggctacacagagaaaccctgtctcggaaaaaaaagaaaaaaaatagagtagAAAATGGGTTTAACCCTTTTCATCCCATACCATCACTATCAGCTAAGATGCCTTACAGGCTATGTAGCACTGGAACTTTCTAGAGTAATGGTTCTGCTGTCCGGGTCTTCTGGGCACATTCTTCCACCGACTTAAGATGATCTATGCCTAACAGAGCCCCAGTACAACTATTGAGCAgaatagctgtttcctgagaattACCATAGCTCACTGGGACTGGCACTCCCTAGATAGAAACTGATCCCAGTAATAAACTTTGATAACAAAGACAATAGGCTctggtgattttatttattgCTGGTGTTATCCAAAGTTTAAAAGCTATTGCCTCTGCATCACACCGTTGAAGCAGTCTCCTGGCATGTACTCTAAGTGGTGCAAGCATTTgtttaaaagaaggaaatgtgGGGTTTTAAACTAGCTCTTAAAAGTTGGAGAGGTTTAGATAGGTTTCTTCTGTAAGTCATGTCTTAGCAGTGTTACAGTCAGGATGAAATACAGATGATTCAATGTGCCAAGTTGTAATTTTCATAAATTTCTCAAGTGAAAGCATATTCACAGGCCTCTACTGTGTGCACAGGAGAAGTATTGGATTGACTTGCTCACAGTGGGGGAAACAAAGTACTAGAGGGCTACAGTGAATGACTAAGGTATGTGCCTGGTAAAGGCAGACCGTTGGTGTGTAGTCACCTGTGGCCAAACACGCTACTAAAAACTTACAGTCAAAATTAACTTGAGAGTAACTAATTACACTGTTTCTAACAGCTTGCTTCAAGTACTTATGTGATTTTTGacaatatgtatttattatttcctaATTGTAGGAGATTGCACATAGACTCATGACTAGATGAGGTAACAGAAATGGAGCCAGCCTTTGGTggaaaacaaaaaattgaaatcCTTTTCAGGAACTCTTAAATATCTTAATTCTTATTATGTCCCTGCCTTACCTCCAACCCCATCTGCCCACTTCAGAAAATCACTTGACAACTGGCATGGAAGACAGACCCGAGTGTAAACCTAAAACAGGATAGATCTGGAGCCTTGTGGTCTGGTCTCACTGGAGAGGGCACTAAGTATAGACCGGGGCCTAGCACAGTGAACAGCTTCGAACTTAGAGCATGCTCTGCTACACCTTTTGGAATTCTCCATTGCTGGGGGCAGCCAAGACCAGTTGCCACTCCTAACTGCCTCTCTGAATTCAGGAGAGTATACAACATACCCACATCCTGGGCAGCAAGGGGTTCTTTATACAGCAGCAGTGTGTATCCATCACTCCAAATCCTTTTAACCTCTAAATGTTCTTAGTGTCACCCACCTGACACCCTAAAAGGTTTGCTATTAACTTGTTTGTTTTAACCTTAGGCTACAGACCACTAAATGAGTACCTTAACAAGAACCTGCCTTTGGCACATTCTTTTGAAGTTTGAGCTAAGATCTCATATGGCTGGACTTCTGTTTCTATGGAAGAGAATATTCCTTATCTGCTTATTTGAATAAACAGGAAAAGGGTTTCTCCCAAAA