Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Atp5h
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D
Also known as 0610009D10Rik|Atp5pd
Coordinate chr11:115306517-115310745
Strand -
Gene summary Predicted to enable proton transmembrane transporter activity. Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in mitochondrial ATP synthesis coupled proton transport. Predicted to act upstream of or within ion transport. Located in mitochondrion. Is expressed in several structures, including alimentary system; integumental system; nervous system; respiratory system; and sensory organ. Orthologous to human ATP5PD (ATP synthase peripheral stalk subunit d). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atp5h

Retroname Coord Strand Genomic Region ENSG
Atp5hP2 chr1:158995675-158996249 - Intergenic
ENSMUSG00000061992 UCSC
Atp5hP5 chr14:81940640-81940787 - Intergenic
ENSMUSG00000115385 UCSC
Atp5hP6 chr14:87678618-87679161 - Intragenic
ENSMUSG00000115484 UCSC
Atp5hP7 chr15:5150083-5150654 - Intergenic
ENSMUSG00000068706 UCSC
Atp5hP3 chr2:153255728-153256304 + Intragenic
ENSMUSG00000082283 UCSC
Atp5hP4 chr6:140365859-140366432 + Intergenic
ENSMUSG00000107891 UCSC
Atp5hP1 chr1:15137259-15137833 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_027862.1
GAGAGCACTCCGCCGGGGGTCGGTGAAGtatCCCAAGATGGCTGGGCGTAAACTTGCTCTAAAAACCATTGATTGGGTATCTTTTGTGGAGGTCATGCCCCAAAACCAGAAGGCAATTGGAAATGCCCTGAAGTCCTGGAATGAGACCTTCCACGCCAGGTTGGCTAGtctgtctgagaaaccacctgcgATTGACTGGGCTTACTACAGGGCCAATGTGGCCAAGCCTGGCTTGGTGGATGATTTTGAAAAGAAGTATAATGCCCTGAAGATTCCTGTGCCTGAGGATAAATACACAGCCCTGGTGgaccaggaggagaaggaggatgTGAAGAGCTGTGCTGAGTTTGTGTCTGGATCCCAGCTCAGGATCCAGGAGTATGAGAAGCAGCTGGAGAAAATGAGGAACATAATTCCCTTTGACCAGATGACCATTGATGACTTGAATGAGATCTTCCCAGAAACCAAGCTGGACAAAAAGAAGTACCCGTACTGGCCCCACCAGCCCATCGAGAACCTGTGAAGCAGCCTGGGACGGAGCCCCGGCCgacatgaaataaaacatttaaatagt