Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Nanog
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name Nanog homeobox
Also known as 2410002E02Rik|ENK|Stm1|ecat4
Coordinate chr6:122684448-122691592
Strand +
Gene summary The protein encoded by this gene is a DNA binding homeobox transcription factor involved in embryonic stem (ES) cell proliferation, renewal, and pluripotency. The encoded protein can block ES cell differentiation and can also autorepress its own expression in differentiating cells. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2015]

Retrocopy(s) from Nanog

Retroname Coord Strand Genomic Region ENSG
NanogP1 chr12:61505069-61505825 + Intergenic
ENSMUSG00000100476 UCSC
NanogP2 chrX:88927238-88927502 + Intergenic
ENSMUSG00000100506 UCSC

Expression

Transcript Sequences

>NM_028016.3
AAATCTATCGCCTTGAGCCGTTGGCCTTCAGATAGGCTGATTTGGTTGGTGTCTTGCTCTTTCTGTGGGAAGGCTGCGGCTCACTTCCTTCTGACTTCTTGATAATTTTGCATTAGACATTTAACTCTTCTTTCTATGATCTTTCCTTCTAGACACTGAGTTTTTTGGTTGTTGCCTAAAACCTTTTCAGAAATCCCTTCCCTCGCCATCACACTGACATGAGTGTGGGTCTTCCTGGTCCCCACAGTTTGCCTAGTTCTGAGGAAGCATCGAATTCTGGGAACGCCTCATCAATGCCTGCAGTTTTTCATCCCGAGAACTATTCTTGCTTACAAGGGTCTGCTACTGAGATGCTCTGCACAGAGGCTGCCTCTCCTCGCCCTTCCTCTGAAGACCTGCCTCTTCAAGGCAGCCCTGATTCTTCTACCAGTCCCAAACAAAAGCTCTCAAGTCCTGAGGCTGACAAGGgccctgaggaggaggagaacaaggtCCTTGCCAGGAAGCAGAAGATGCGGACTGTGTTCTCTCAGGCCCAGCTGTGTGCACTCAAGGACAGGTTTCAGAAGCAGAAGTACCTCAGCCTCCAGCAGATGCAAGAACTCTCCTCCATTCTGAACCTGAGCTATAAGCAGGTTAAGACCTGGTTTCAAAACCAAAGGATGAAGTGCAAGCGGTGGCAGAAAAACCAGTGGTTGAAGACTAGCAATGGTCTGATTCAGAAGGGCTCAGCACCAGTGGAGTATCCCAGCATCCATTGCAGCTATCCCCAGGGCTATCTGGTGAACGCATCTGGAAGCCTTTCCATGTGGGGCAGCCAGACTTGGACCAACCCAACTTGGAGCAGCCAGACCTGGACCAACCCAACTTGGAACAACCAGACCTGGACCAACCCAACTTGGAGCAGCCAGGCCTGGACCGCTCAGTCCTGGAACGGCCAGCCTTGGAATGCTGCTCCGCTCCATAACTTCGGGGAGGACTTTCTGCAGCCTTACGTACAGTTGCAGCAAAACTTCTCTGCCAGTGATTTGGAGGTGAATTTGGAAGCCACTAGGGAAAGCCATGCGCATTTTAGCACCCCACAAGCCTTGGAATTATTCCTGaactactctgtgactccaccagGTGAAATATGAGACTTACGCAACATCTGGGCTTAAAGTCAGGGCAAAGCCaggttccttccttcttccaaatattttcatattttttttaaagatttatttattcattatatgtaagtacactgtagctgtcttcagacactccagaagagggcgtcagatcttgttacgtatggttgtgagccaccatgtggttgctgggatttgaactcctgaccttcggaagagcagtcgggtgctcttatccactgagccatctcaccagcccctggtttatttttttaattattatttgctttttgtttatcaagacagggtttctctgcatagctctaaTTGTCTTTGAACTAGCTctgcagaccagcctggccttgaactcagagatctgcccacttatctttgcctcctgaatgctgggaccaaaggtggcataccaccacacctggcatatatattgtttatttctatttctatttttattggtgCCAGAGCAAACCTAGGACTTAGAACATGCTGGGCACCAACTCAACTTCTGAGCTCTATTTACAACTTGGTGTGTTAGTGTATTTGTCTTAGTTCTGAATTTGTCCTTTTTTTAGTGTTAACTCTAGGCTTTGGAGACAGTGAGGTGCATATACTCTCTCCTTCCCAAGAATAAGTGCTTGAACACCCTTACCCACGCCCACCCACCCATGCTAGTCTTTTTTCTTAGAAGCGTGGGTCTTGGTATACACTGTGTCATTTTGAGGGGTGAGGTTTAAAAGTATATACAAAGTATAACGATATGGTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGAGGGTAGCTCAGATATgcaataagttcaaggccaacctgtacTATGTTTAAATAGTAAGACAGCATCtcgataaaataataaaactaaagtctcaacaaaataaaagctTTCACCTATTAAGGTGCTTGCTTGTCCTTGGAGTCCCCCAAGAGTAACTGCTATGTTAATATCTGTAGAAAGATGTTTATATTTGACTGTACCATGATGAACCGATGCCAGCTGGACtagtttaaacaaaataaaacactaattTTACCTTTA