Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Snx10
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name sorting nexin 10
Also known as 2410004M09Rik
Coordinate chr6:51500882-51567659
Strand +
Gene summary Predicted to enable 1-phosphatidylinositol binding activity and ATPase binding activity. Involved in osteoclast differentiation. Acts upstream of or within several processes, including bone mineralization involved in bone maturation; bone resorption; and cellular response to leukemia inhibitory factor. Located in several cellular components, including apical cytoplasm; endoplasmic reticulum; and secretory granule. Is expressed in forelimb and humerus cartilage condensation. Used to study autosomal recessive osteopetrosis 8. Human ortholog(s) of this gene implicated in autosomal recessive osteopetrosis 8. Orthologous to human SNX10 (sorting nexin 10). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snx10

Retroname Coord Strand Genomic Region ENSG
Snx10P1 chr6:64967927-64969111 + Intergenic
ENSMUSG00000086176 UCSC
Snx10P2 chrX:94425047-94426086 - Intergenic
ENSMUSG00000080283 UCSC

Expression

Transcript Sequences

>NM_001127349.1
agggcggggcggggcgctGCGTGCGCTGGACGCGGGGCTGCGCTCCTCGGGTTCGCTCTTAGGCGCTCGTCGCCGCCGCGCCTTGAGTCAGCAAACTCCGCCGTGCTCCGGGCCGGGCGTTCAGAACCGCGTGTTGATCGTGTCCTGAGCTGAAGATGTTCCCAGAACAGCAGAAAGAGGAGTTCGTGAGTGTCTGGGTCCGGGAccccaggattcagaaggagGACTTTTGGCACTCTTATATCGACTATGAGATCTGCATTCACACAAATAGCATGTGTTTTACAATGAAAACATCTTGTGTACGAAGAAGGTATAGAGAGTTCGTGTGGCTGAGGCAAAGACTCCAAAGCAACGCGTTGCTGGTACAATTACCAGAACTTCCGTCTAAAAACCTGTTTTTCAACATGAACAATCGCCAGCATGTCGACCAACGCCGCCAGGGCTTGGAAGATTTCCTCAGAAAagTCCTGCAGAATGCACTCTTGCTTTCCGATAGCAGCCTCCACCTCTTCCTGCAGAGCCATCTGAACTCCGAGGACATTGAAGCATGTGTTTCTGGGCAGACCAAGTACTCGGTGGAAGAAGCCATTCACAAGTTTGCTTTAATGAATAGACGGTTtcccgaagaagaagaagaagggaagaaagacgCCGACGTAGAGTATGATTCAGAAAGTTCATCCTCTGGGCTTGGACACAGTAGTGATGACAGCAGTTCTCATGGATGTAAAACGAGCCCAGCTCTGCAGGAGTCCTGAGAAGGAATTCTGGGGCTACCACCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGATTCTTACCCAATGCCACTGTCAGTATCCCAGGTAGTGAAATTCTTAAAGTGGTGGGGTATTAGTACTAGTAGTTTTATGTTGTCTAATTCTAGCCAAGCTTCTGTGTGAAGCTATAAGGTCTGTGAATGCCATACGGCCCTTTATTGCCATCCTATACTTGTAAATACGATCCTGCTCTCAAGTGAAATGAGttatatgagatatatatatatatatttggtcttAACTGGATTTTAAAGAGTTTGGCGTATTAGTAGCATTTAAAGCCAGATAGGGCACCCTTGCTGTGTCAATGAGGAAGTTACTGTAAACACAGTGTTCGACTGAAGCTAGAGTGCAGAGTCGCAGCACTGCTGACTGCCTGCCTCTCTGACATGTGGCTCTTGTTTCGTGGGGACTTTTCCTCTGGAAAATACTTTGCCTTCAGGTATTTGATTGAAATATTTAAGAGTATTTAAGCTTTCCAGTATCCTGTATCATGTGTAAATGGAAAATATGTCTTACAAATAGAGATgcactaaaacaacaaaaacaacaacaaaacaaacgtTTACATCctaggagggaaaaaaaacaaaagtctttGTAATTTTGCTTAAATTTGCCAGACACAGATTTAGAAATACATTCTCACTGTCCAAAATCAGCTTAAACACTGGCTCTGGCGATGAGTCATTGTGCAATTAGAATCATATCTTATGATTTATTTTCTGTcattaaaaaaatgtacattaaaaaaaaaagtcaccaggtAGCTTCCATGAGGAATAGCTCCTCACGGTTCATTTTTTCAGTTAGAAGAAGgtttttatgagttaattttaccCATAAATATTTCAGTAATTTTGGAGTGGAAGTTGGGTTGCTAACATCAGAGCTCATGTTCATGTTTTAGAAGCCCTTTCTTTCTAGGTGTCTCTCAAAAGACTGGCTTAATTGGAataaaatagctttttttttttaagtgtcccaAAGATAAGATATCTTGGGGTCCACCATGAGCTTCCAGTTTCAGCCGAGGCAGCAGTTTTCCTGGGATAATTAGCCAAGGGTTCCCCAGAGTCTTCCTAGGTATCTCTGGGAACCAGCAGAAGGAATTTTCACCTAAGAGGGATAACTTGTTGCTTCCAATGAATGGCTCCCACTCTCGTGGGTGCAAAAGCGGCAGCAAAAAGCAGCCATTTACTTGGGTACTTAAGAGTTATTGTATTAATAAAAAGTTATTGACTTGTCCTTTGAGAGCCTTCTTACAGAGAATtggttaaaaaaaccaaacattcaaTTTGGAATAagaatgattttttaaagttCTGTCTGAAACATTATCAAACTTGTGTAAATATTTTGATTTATGTCTTAGATCCTGTTAACCGTGTCCTCtaattgtctttattttaatGCCAAAAGGAAGTGATTATGCAGCTGTGTGTAGAGTTTCAGAGCAAGTTCCTCAGCAGTGTAGATGAATTCACATCATTTATGTTTTAACGGCGTTTTTTTGGAAAGCATAAATTGTGACATCAGTTATCATGCTACTTCTTGGTGACATAATATAACCTTTGAAGTTAATATGAAGTGATGTTTGCTCCATAAACTCCACAGTCACTGTTTTCACATTAAAcatgaaagcaaagc
>NM_001361577.1
TGGTCTGATGGCTGAAGCTGGATTTCTAGGTGGGGGTTGATCGTGTCCTGAGCTGAAGATGTTCCCAGAACAGCAGAAAGAGGAGTTCGTGAGTGTCTGGGTCCGGGAccccaggattcagaaggagGACTTTTGGCACTCTTATATCGACTATGAGATCTGCATTCACACAAATAGCATGTGTTTTACAATGAAAACATCTTGTGTACGAAGAAGGTATAGAGAGTTCGTGTGGCTGAGGCAAAGACTCCAAAGCAACGCGTTGCTGGTACAATTACCAGAACTTCCGTCTAAAAACCTGTTTTTCAACATGAACAATCGCCAGCATGTCGACCAACGCCGCCAGGGCTTGGAAGATTTCCTCAGAAAagTCCTGCAGAATGCACTCTTGCTTTCCGATAGCAGCCTCCACCTCTTCCTGCAGAGCCATCTGAACTCCGAGGACATTGAAGCATGTGTTTCTGGGCAGACCAAGTACTCGGTGGAAGAAGCCATTCACAAGTTTGCTTTAATGAATAGACGGTTtcccgaagaagaagaagaagggaagaaagacgCCGACGTAGAGTATGATTCAGAAAGTTCATCCTCTGGGCTTGGACACAGTAGTGATGACAGCAGTTCTCATGGATGTAAAACGAGCCCAGCTCTGCAGGAGTCCTGAGAAGGAATTCTGGGGCTACCACCTTAGGAACGAAATTGTGCCCAGCCAGAAAGAATGCTGGCTCATAATAGATTCTTACCCAATGCCACTGTCAGTATCCCAGGTAGTGAAATTCTTAAAGTGGTGGGGTATTAGTACTAGTAGTTTTATGTTGTCTAATTCTAGCCAAGCTTCTGTGTGAAGCTATAAGGTCTGTGAATGCCATACGGCCCTTTATTGCCATCCTATACTTGTAAATACGATCCTGCTCTCAAGTGAAATGAGttatatgagatatatatatatatatttggtcttAACTGGATTTTAAAGAGTTTGGCGTATTAGTAGCATTTAAAGCCAGATAGGGCACCCTTGCTGTGTCAATGAGGAAGTTACTGTAAACACAGTGTTCGACTGAAGCTAGAGTGCAGAGTCGCAGCACTGCTGACTGCCTGCCTCTCTGACATGTGGCTCTTGTTTCGTGGGGACTTTTCCTCTGGAAAATACTTTGCCTTCAGGTATTTGATTGAAATATTTAAGAGTATTTAAGCTTTCCAGTATCCTGTATCATGTGTAAATGGAAAATATGTCTTACAAATAGAGATgcactaaaacaacaaaaacaacaacaaaacaaacgtTTACATCctaggagggaaaaaaaacaaaagtctttGTAATTTTGCTTAAATTTGCCAGACACAGATTTAGAAATACATTCTCACTGTCCAAAATCAGCTTAAACACTGGCTCTGGCGATGAGTCATTGTGCAATTAGAATCATATCTTATGATTTATTTTCTGTcattaaaaaaatgtacattaaaaaaaaaagtcaccaggtAGCTTCCATGAGGAATAGCTCCTCACGGTTCATTTTTTCAGTTAGAAGAAGgtttttatgagttaattttaccCATAAATATTTCAGTAATTTTGGAGTGGAAGTTGGGTTGCTAACATCAGAGCTCATGTTCATGTTTTAGAAGCCCTTTCTTTCTAGGTGTCTCTCAAAAGACTGGCTTAATTGGAataaaatagctttttttttttaagtgtcccaAAGATAAGATATCTTGGGGTCCACCATGAGCTTCCAGTTTCAGCCGAGGCAGCAGTTTTCCTGGGATAATTAGCCAAGGGTTCCCCAGAGTCTTCCTAGGTATCTCTGGGAACCAGCAGAAGGAATTTTCACCTAAGAGGGATAACTTGTTGCTTCCAATGAATGGCTCCCACTCTCGTGGGTGCAAAAGCGGCAGCAAAAAGCAGCCATTTACTTGGGTACTTAAGAGTTATTGTATTAATAAAAAGTTATTGACTTGTCCTTTGAGAGCCTTCTTACAGAGAATtggttaaaaaaaccaaacattcaaTTTGGAATAagaatgattttttaaagttCTGTCTGAAACATTATCAAACTTGTGTAAATATTTTGATTTATGTCTTAGATCCTGTTAACCGTGTCCTCtaattgtctttattttaatGCCAAAAGGAAGTGATTATGCAGCTGTGTGTAGAGTTTCAGAGCAAGTTCCTCAGCAGTGTAGATGAATTCACATCATTTATGTTTTAACGGCGTTTTTTTGGAAAGCATAAATTGTGACATCAGTTATCATGCTACTTCTTGGTGACATAATATAACCTTTGAAGTTAATATGAAGTGATGTTTGCTCCATAAACTCCACAGTCACTGTTTTCACATTAAAcatgaaagcaaagc