Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Cnn3
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name calponin 3, acidic
Also known as 1600014M03Rik|Calpo3
Coordinate chr3:121220190-121251854
Strand +
Gene summary Predicted to enable microtubule binding activity. Predicted to be involved in negative regulation of ATPase activity. Predicted to be located in several cellular components, including dendritic spine; neuronal cell body; and postsynaptic density. Predicted to be active in cytoskeleton. Is expressed in several structures, including body cavity or lining; genitourinary system; integumental system; respiratory system; and vertebral axis musculature. Orthologous to human CNN3 (calponin 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cnn3

Retroname Coord Strand Genomic Region ENSG
Cnn3P3 chr13:98749778-98751498 + Intergenic
ENSMUSG00000114733 UCSC
Cnn3P2 chr5:8962763-8964464 + Intragenic
Intragenic
ENSMUSG00000106664 UCSC
Cnn3P1 chr5:106758398-106758890 + Intergenic
ENSMUSG00000106142 UCSC

Expression

Transcript Sequences

>NM_028044.2
GGGCAGCGAGCAGGGCAGCCGGTCCCAGTCCAGAGCGACCCGGAGCCTCCGCGGGACTCGAGTCCTAGCGAACCTCGAAGCATCATCCGCGTCCGTCTGCGGCGTTCGGGCTTCTCCGGCGCCGCGCAGGGGAGCGAGCTCGTGCATCACCCGCGCGGCCGCCGCTGGGGCTAAGAGCAGGGACACCGAGGGTGACTGACCGCTAGAACTCTTCCAGTCGTCCAAACAGCCATGACCCACTTCAACAAGGGCCCTTCCTACGGGCTCTCCGCCGAAGTTAAGAACAAGATTGCATCCAAGTATGACCAGCAGGCCGAGGAAGATCTGCGCAACTGGATAGAAGAGGTGACAGGCCTAGGCATTGGCACCAACTTCCAGCTGGGGCTGAAGGACGGCATCATATTGTGCGAaCTCATAAACAAGCTACAGCCAGGCTCTGTGAAGAAAGTCAACGAATCCTCACTAAATTGGCCCCAGTTGGAGAATATCGGCAACTTCATTAAAGCTATCCAGGCTTACGGTATGAAGCCCCATGATATATTTGAAGCAAACGACCTCTTTGAGAATGGCAACATGACCCAGGTTCAGACGACGCTGGTGGCTCTAGCAGGTCTGGCGAAAACAAAAGGATTCCATACAACCATTGACATTGGCGTTAAGtatgcagaaaaacaaacaagacgtTTTGATGAAGGCAAATTAAAGGCTGGCCAGAGTGTAATTGGTTTACAGATGGGTACCAACAAATGTGCCAGCCAGGCGGGCATGACAGCCTATGGGACTCGGAGGCATCTTTATGATCCCAAGATGCAGACGGACAAACCCTTTGACCAGACCACGATTAGCCTGCAGATGGGCACCAACAAAGGGGCCAGCCAGGCTGGGATGTTAGCACCGGGCACCAGAAGAGACATCTATGACCAGAAGCTGACATTACAGCCAGTGGACAACTCGACCATTTCTCTACAGATGGGCACCAACAAAGTTGCTTCCCAGAAAGGAATGAGCGTGTATGGGCTTGGGCGGCAAGTATATGACCCCAAGTACTGTGCCGCACCCACAGAACCTGTCATTCACAACGGAAGCCAGGGCACGGGCACCAATGGGTCGGAAATCAGTGATAGCGATTATCAGGCAGAATACCCCGATGAATATCATGGCGAGTACCCAGACGACTACCCTCGGGAGTACCAGTATGGCGACGACCAGGGCATTGATTATTAGAGTCACACACAGGAGCGCAGTATTTAGTCCATTGTTTTATCCAGTGAgacccaagctagccttgaataaTTCTTCTCTCGTCTTCCTGAAACACTATTATGCTTGTTGTACCTTTAAAGTATGCCTTATGtacattcctttctccttttcctgcctcctccctAAATAGCTGCCTTCTAGTGCTGTAGCAAGGGAGCCCTACTGCATAGCCAGTAACTCGCGTCTGTACCATGGAAAGGGCGGAACgattctccaggacagccagctctTTCGTTGAAGATCTATCTATGCATTTTTTTACACTTACACATAAACTGGTATTTTCGAACAATAGGAAactattttttctcctttttttacaGTTTTAGTACGTATCTGGCTTGTATGTGGAAGACTAAAAAGTTGATTTGCTAAATGTGGTCTTTGCCAACTAAAATCTGAGATGCAGCTTTAGACCCTGACACGTGGATGTTCTTCTGCAGTCTTGTCTGCTAAGTTTTAAATAAAGTCATGATCAGTGTGCATTTGTGATTACATGTGTACTCATTCTTTTCCCAAGCTGACGAGGTCTCTCCCGAGTGGCGCTTCGAAAGGCGTGCATGCAGAAATGGCCGAGGACATGCAGGTTTGGGTGGTGTGCCTGCAGACTTCATTTGTGCCAATGTATTACTGTAGAGTCGCTCTGTTTCCTTCAACTGTATTTATTGCTGCGTTTCTCAGCATAAACTTATCCCATtgtattttttataaataaatatttttttttgaacaTTCATATG