Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Pigx
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name phosphatidylinositol glycan anchor biosynthesis, class X
Also known as 2010319C14Rik|PIG-X
Coordinate chr16:31903234-31918545
Strand -
Gene summary This gene encodes a type I transmembrane protein in the endoplasmic reticulum (ER). The protein is an essential component of glycosylphosphatidylinositol-mannosyltransferase I, which transfers the first of the four mannoses in the GPI-anchor precursors during GPI-anchor biosynthesis. Studies in rat indicate that the protein is translated from a non-AUG translation initiation site. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Retrocopy(s) from Pigx

Retroname Coord Strand Genomic Region ENSG
PigxP2 chr12:60470265-60470849 - Intergenic
ENSMUSG00000112840 UCSC
PigxP1 chr6:39425708-39425850 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001111025.1
TCCGGAACCTGGAGTTGTAGGGAGATCCTAGGGTGGAAGTGTTAGCCGAGTTCTGTTCGGGTCATCGGGAAAGGTGAGCGCGCGCTCAGCGTGCTCAGATTCCTTCGGTGACCGCAGCTTGCCCCGAGCGCCCCTTTCGGGCGTCGGGCTCCGGCGTCCTGGCTGCCGGCGCTGTGGCCTGGCTGCTCCTTTGGGCAGCCTGGCTGGTCGGCAGGCTCGCCGCGGACTTCAGCGACGCCCCTTTCAGCGCTGGTGTAAGGGCCACTtgttctgaaattattttaaggCAAGAATTTTTGAAAGATGGTTTCCACAGAGACCTTTTAATAAAAGTGAAATTTGGAGAGAGCATTGAGGACCTACAGACCTGCCGGCTCCTAATTAAGCATTACATTCCACCAGGACTCTTTGTGGATCCCTATGAGTTGGCTTCACTACGAGAAAGGAACTTAACAGAGGCAGTGATGCTATCAGAAAGTTTTAATATAGAAGCCCCCAACTACTTGTCCAATGAATCTGCAGTCCTCATTTATGCCCGGCAGGATGCACAGTGCATCGACTGCTTCCAGGCCTTTTTACCTGTGCACTATCGCTATCACCGGCCACATAAGAAAGATGGAGACACCCTCATTGTGGTCAACAACCCCGACTTACTGATGTACTGTGACCAAGagttTCCAATTTTGAAATGCTGGGCTCAGTCAGAAGTAGCAGCTCCTTGTGCTTTGAAGAGTGAGGAGATCTGCCAGTGGAAAAGCATGCAGTACAAATCAatacttaagaATTTGACAGTGCAGGTTCCAGTGGGACTGACTATACATACCTCTTTAGTGTGTTCTGTGACGCTGCTCATTACGATTCTGTGTTCTACTTTGATCCTTTTAGCTGTTTTCAAATATGGCCACTTTTCCCTGTAAGTTTTGTACAGCTAAGTGTTTTCTATGAACCTAATAAATGAGACAAGAGTGCTCTTTTCAGAACTAA