Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Scaf11
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name SR-related CTD-associated factor 11
Also known as 1110061H03Rik|2610510E10Rik|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013
Coordinate chr15:96309579-96358886
Strand -
Gene summary Predicted to be involved in spliceosomal complex assembly. Predicted to be located in nuclear body and nucleolus. Is expressed in diencephalon lateral wall ventricular layer; heart ventricle; midbrain ventricular layer; and telencephalon ventricular layer. Orthologous to human SCAF11 (SR-related CTD associated factor 11). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Scaf11

Retroname Coord Strand Genomic Region ENSG
Scaf11P1 chrX:88845680-88850966 - Intragenic
ENSMUSG00000083253 UCSC

Expression

Transcript Sequences

>NM_028148.2
gggagccgCCAGACACGGCGGGGGAGGGGAGCGGCGGTGGCGCAAGCGGCGCGGAGCTAGCGCCGCCTGCCCGGGTCTCCTGCTGCGTGGCTGCCTGCGTGCTCCCGACCCGGCCGTCCGAGCCAGCCCGCGGGCCGCGCGCGCTTCCGAGCGGCCGGAGGAGTCCATGGTGCAGAACTTAGCGGCGGACTGACGGAGACCGGGCCTCCTGCGCCGGCGCGGCCGCGGGACCTCGGCCTCAGGAAATTCCTTCACAAGGAGAGATGAAGAAGAAATCTGTATATAATCAGAATGTGGGTGATCAGGAGTGTGACGACATGGAAGGTGAAGAAAACAGCAATACTGCCGATGCCTCTGGCTTACTGTACAGTGAAGCGGACAGATGTCCAATATGTCTCAGTTGCCTGTTAGGGAAGGAAGTTGGTTTTCCAGAAAGTTGTAATCATGTCTTCTGTATGGCCTGTATTCTTAAATGGGCAGAGATATTGGCTTCTTGTCCAATCGATCGGAAACCTTTTCAGGCCGTGTTTGAACTCAGTGCATTTGAAGGTTGTGCTAAGATTCAAGTGAAAAGACGGTTGAGAGAAACAGAGGACAAGGAAAATCAAAGGTCTTTTAAGAAGCAACTCTTTTATCATGAGAGTTCCAAAGGCAACAAGAGaaaaagaaacaccaTAAGAGAAGATCTGTTATGTGAAAGATCTGATGGCTTGAAGGTGTTGTATAgAAACATTTCAAACAAAATGGATGGAAAGAAAAATGCTACAGTAAAGACAAATAAGgttCAAAGATCAAATCAGTGTACAGATTCGTGTATTAGAAATGAGATGTCCAGTGTGTTTTCATGTGGCAGCCACAGCTGGGGACCTCGCACCCATAGAGCTTCCTGtacaGAATCTATAGAAGTCAATGAGATCAGTGCATTGATTAGACAAAAACGACAGGAACTGGAGTTGTCATGGTTTCCTAATACATTACCTGGAAATGGAAGAGTTGGCTCCGTACCCTGGAGTGTAGAGACAGCCTTCCtctctctggcttcctcaggcttGCCAAGGACGGTTTTCCCAGCAAGTACCACGTCGCTAGAGCATTTTGGTACTTCTCATAAGGGATATGCATTAGCACATAcccaaggaggaggagaaaaaaagcaaacttCAGGCACATCAAACACCAGAGGATCGAGACGAAAACCTGCAGCAACTGCTCCTACAAGGAGGTCCACGCGAAACACTCGAGCCGAGACAGTCAGTCAGTCCCAGAAGTCCCCAGTGTCAAACTATTCTGAGTGTGATGCCCCAGGGAATAGTAATTCCTCTGTAAGTATTTCCCCTCCAGCTGaatcagaaaagcaaacaagacagGCTCCAAAACGGAAGTCtgtaaggagaggaagaaaaccaCCTTTATTGAAAAAGAAACTTAGGAGATCTGTACCTCCCGCTGAAAAATCATCTAGCGATTCAGTAGAGGAAGAAACTGTGGACTCTGACACTCCACCCGtgttggagaaagagcaacaatcGTGTGTAGAAAGCAGTAGCATTTGCTCTGTTCAAACCGATGAAGAGAATCATCTGCATCTTGAAAGTTGCAgtgaacaaacagaagaaaatgaacaagCCAACAATCATGAGATTGAGGAGCAAACAGAAAGTTTAAATTCTGAATCTTGCACTCAGGACCCTCCTGGGCTTGTTGGAGAAGATACAGGGATAGAGGCCAAGGAGTTCTGTGCAGACCATGATATTTCGCCAGATACTTCTCTAAGAGGAAGGGATTCAGCAGAACACCAAGAGCAGCTGTCTGGAAGCTCGGAGTCAGAGGTCCAGGCACTTGTGTGTACGGAGAGTCCTCCTGAAGGGTCTCCTACATGTCCACCTTCCGACATCGAACACCAACCTGTGTCCAGTCCCCTGGGTGAAGTATCCGATAACACCACACCAGTGGTTAGCGATGAAAGAGCAGAGGAGAGTCTCACTGTAGAAAGTACTGACTTGAACGATGAAAGAACAGGGGAGAGTCTCACTGTAGAAAGTACTGACTTGAACGATTCTGCAGTAAACATAGAAGCATTTGTAGAGAGCCCCAAAATGGAATCTTGTGAGGGTGAAACTGCACAGGGACTGGACAGACACTGTGTTCCCAGCTCAGACTCTGAGTTGCCTGAGCATATTCaaacagaaaatacagaaataattcCAGCATGTGAACATATTCaaacagaaaatacagaaataattcCAGCGTGTGAGCATATTCaaacagaaaatacagaaataattcCAGTGTGTGGtactttagaaaatgaaaattctgatgCTGTTCAAGATTGTGAAGATAACTTATTAAAACATAATCTTGACAACTCCCAATCAGATAAATTCCTAGAAGAAACGACAGAGTCTCTGGTTGAACATCCCATCCATGCAGAGTTACCTCACAAAGAGGTTGACCAGAGTGAGAAACATTTCAGTGAAGATAATAATGAATCAGTACCTATGGAGTGCGATTCCTTCTGTAGTGACCAGAATGAGTCTGAAGTAGAGTCATCCGCAAATACTGACTCTAAACAATTGAGTGAAAATTCTGTGCCACACAGTTCTGAGgacaagctgtcttctgatccTGCAGTTGAGAAGGTTGAAACTGTAGCACAACCAGCTGAAAGCTTAGTGGATAAAGCCCCAAAGCCTCGTACTCGAAGATCTAGATTCCATTCTCCATCTACAACGTGGTCTCCTAATAAAGATGCTGCACAAGAAAAGAGGCGCGCTCAGTCTCCATCTCCAAAAAGAGAGACTGTAGTAGAAAGTCAGAGTTCTCAGTCACCGTCACCCAAGAGAGAGTCTGCCAGAGGACGGAGGAAATCGCGTTCTCTCTCACCGAAAAAAGATGTAGCAAGAGAAAGGAGGCAGTCTCGCTCTCCAAAGAGAGAGAATGCTAGGGAAGCTAAAAGATCTGAGTCAGGGTCCCCAAGAAGAGATACTTCTAGAGAGAACCAGAGGTCTCAGTCCCGAGTGAAAGATTCTTCCTCAAGAGAAAAGTCGAGGTCccggagcagagagagagaaagcgataGAGAAGCTCAGAggagagagcgagacagagagaggagagctaGAAGATGGTCCCGGTCCAGATCCCGCTCTCGATCGCCATCAAGATTAAGAACAAAAAGTAAGAGTTCATCGTTTGGTAGAAATGAGAGAGATAATTACTCTCCTCGGTGGAAGGAAAGATGGACAAATGATGGTTGGAGGTGTCCCAGAGGAAATGACCGGTACCGGAGGAATGATtcagagaaacaaaatgaaaatacaagaaatgaaaagaatgacATCACTGCAGATAGTAATGATCCAAGTTCCACAGataagcatagaagtgactgtcCCAGTTGGGTAACAGAGAAAATAAACTCTGGGCCAGATCCAAGGACCAGAAATCCAGAAAAGTTAAAAGATTCCCActgggaagaaaacagaaatgaaaattcaGGGAATTCTTGGACTAAAAACTTTGGCCCAGGCTGGATGTCCAGCCGTGGTCGAGGCGGCCGTGGGAAAGGTGCTTACAGAGGTAATTTTGCCTGTAATGACCAGAGCGAGAACAGGTGGCAAAGCCGTACACCCCTCTCAGGGAGCGACTCTTTCAAGTCTGCGGAGCAGCAGCCCTCTAAGCGCAAAAGTGAGCAGGAGCTGTCCTTTGGCACAGCGGCAGACAGATCAGGGTGGACGTCTGCATCTAGCTGGGCAGTAAGAAAGACTCTGCCCGCAGATGTGCAGAGCTATTACTCGCGGCGCGGCAGGAACTCTTCAGGCCCGCAGTCTGGGTGgatgagacaggaggaggagACACCTGAGCAGGATTCTAACTTAAAAGACCAAACAAACCAAGTCGATGGTTCTCAGCTGCCTGTGAACATGATGCAGCCACACATGAGTGTGATGCAGCCTCCAGTGAACGCCCCGCACCCGCCTGTGGGCGTCTTCCCATACCCAGTGGGGCTGCCCGCCCCGATGATGAATATGCAGCGGAACCCTTTCACCATGCACCCTCCGATGCCCCTGCATCTCCACACAGGAGTTCCTCTCATGCAGGTAGCTGCCCCTGCAAGTATACCTCAGGGACCGCCGCCACCACCCCCTCCGCCACCATCCCAGCAGGTCAGCTACGTCGCCTCACAACCAGATGGGAAACAAGTGCAGGGcctttcaagtgcttctcatgTAAGTAATAACATGAATACACAAGTGTTGCCTGCTCCATCAGCAGCCCCAGCAAACACGGGATCAGTTCAGGGACCAAGTTCTGGTAATACTTCGTCATCAAGTCACGTCCAAGCCTCTAACGCTGCTGTAAAATTGGCAGAAAGCAAAaAATTGCAAATTCAAGAGAAAGCAGCACAGGAGGTGAAACTGGCTATTAAGCCGTTTTATCAGAATAAAGACATCACTAAGGAAGAGTACAAAGAGATCGTGCGGAAGGCAGTGGACAAAGTTTGTCATAGTAAGAGTGGAGAAGTAAACTCTACCAAAGTGGCCAATCTGGTTAAGGCGTACGTAGACAAGTACAGATACTCGCGGAAGAAAGCTCTGGAAGAACCGGGGTCTACAGAAAAAACCTAGGCTGACCGGGAGCACTGCCCAGGACACTGTGGAGATGTTTGGAGACTGCACTGCAGCGTGCGCCCTTACTGAATCACACACAACTGTGATGGAAATCTGGttttgataaaattattttttttattgtaggATATGTTTTGTTCAAAATATAGCTGTGCACTGCAACTTCTATATCTAACCCTAAACTCCAATAAAACAAATTCCAGGGAAAACCAAGGGTGTAATGGGATGTGCGTGTTTATCAGGAGTGTGCTCTCACGTGGATGCTGAATGATGGAGGACAGCGGACTGCATAAGCCAGAAACCTGTACGGGTGCTGGCTGTGGAAgacgtgtctgtctctatctatgtACAATAGTTTATTCTGTCAGGCTGAAAAAGTATGGTCTTTAGGACCTTGCCCCTCTAACTATAGAAACTTAAACAGTGTACTGCTATTAGATATATCTGATATTAATAGAACATGCCAAGTGCAGGTCCCAAATGCGTATTTGTGAAGCACACATCTGAGTAAATGGCTTAGATGGAAAGCAAGTCATCATGAGTAAAAATTAGCCTCAAACCTGCCGGTGCTCCTCACCTCTTTGTCACCAGGTAAAGGTCACACTGTGTGTTGCTTTTGTTGTCTTCTCTCCTAACctaggaaaaaataaattagtgGTTTAATTTGCTACATTACAACTTTGCCATTtcaaggctttgttgaatttagAAGACtaacttgggggaaaaaaaccaaaactatgtTCTTTCATTATACCTTCTATTTATCAGTGGTAGTAAATTATTTGTGCCAACTGGAAACATGCTACTTGGTGGTGACCTTCCTTTCTGGGGGACTAGCATAGATTACATGACCTGCTTTGGCAGCTCCGGGTTGCTTTTCTTCTGTCATGGTGTCAGTGAAATTCTTCTCACACTTCAGAAGTTCCCtaatggggctggcgagatggctcgccaggtaagagcactaactgcgcTTCCAAAGGtactcagttcaaatcccagcaaccacatggtggctcacacccaaccgtaatgagatctgacgccctcttctggtgcgtctgaagtcagctacagtgtacttatttataataataaataaagaagttCCCTAATGGTTACAGTGAATAAAGTGTTAATTTGTTGATTGGTAGCTCTGCTGCATAATTCTAGATACAATAACTATGtctgacagaaggaaggaaaattaaATAATGCTATTTTTGCATAGGTATCAGGGACTagagtttgttgttgctgttgtttttaaagcACCAAGATGTTAATATGTTGATGTTGATGCAGAGTGGGTTCCCAGTGCTTGTGACACTGCTGCTTTCATTGACATCTAGAAAGGAGACTGATAAACTTGGACTGCAGTTACAGTTTTCCCGTTGGTATCAAATAGCTGAGAAGATGTTCCCATAATACGGGGATAGAGCAGGATAAACACTCAGTGAGGCCTACCCATTCACTGACAAGCACAGTGGTCTCTGTGAGACTGTACTTTCTAGAGTGCAGGCAACCTCGTTCTCAGTTCTGCATAATGCATTCCAGCCAGCTTTGAAAGGAAGGCGAATTTTGTGATTTTTAACCCATAGTGATTGCACTAGGTAAATAATAGGCTTTGTTAGGTTATGCTTATAGTCCTTAAGCATTTCCAAAAAGTTTTTGATCTTCTTTTCTACATTTCTGTCATTTATGAtgcaatattttacatttttaattaaagtcTGTGTGAACTTATGATGGCAGATGTGTGGAAGACAGTTGTATACATCCGCGGCTCACCTTGTTCCTTTCAGTTCAGGTTCAGTGGTGCACACTTCTGGTCCTGCTTTGACATTTGTGTGTCAGATGCTGTCTGTCCTCTTCTTCTGCAGCAGTGCTCTGCCTGCATTGTTCTACTGACCCCTGGGAGTAAATGGCAGTTTAAGTTGTGTTTTATACTGTTTAGCTCTTGCAAAGCAAGTTTTAAAGTTTAGGGGAAAGTAGGCGTTGTGTGAACTGTTAAGGCCCCGTGCTCTGGCAGAGCTCCACTCTTGCTGAAGTTCTCTGTTCTGTATCTGGTAGGGCACCGGGTCGAGTGCTTCAGAATCCTCATTTCTAATATATTCTACTATTAGAATATACTCTGGAttagaaatacattagaaatgtaTTCTTACTGAGTTAGAAAACGCATACTTTGTGTTAAAAAATACCATTGCTTTTACATTCTtggtttctcattttttttcttagaaatccACATTCGTTTTGCACGTATATAAACTTAACACAGTTTGGGAGTTGCAGGTTCCTCTTGATCATGACTCAGTATCAACTTGACCTTTGGCACCATGGGCCCTTTAACTTGGTAGTCACGTTGACCCATGTTTCAGGTTGTAGAAATGCCCAGTAGTACTTACTCATTATTTTAACATTCCAGAGGCTTTGCagttgtttgttgctgttttggtgATGACCACTACATCTTCGCCATTCTCTTCCTTCAAATGGCCATGGTGTGTTTGCTGACCGTCCCTGCCCACGCCCCACCCCCAGACATGTGGCCTCAAGCGTGGTGGCTGCCCTGAGTTTGAGACATGGTAGTATAAGTTGCAGTGCTGTCTGCTGAAACAACACTCTAAAACCAGGTTGTGGTCTGTAATATATCCTAATAAATTTTTTTGCTAAAAAGTAgtgtctttaaaattttattaagttTTCTGGGAAATGGTGACTTTTATATCAGTTTACACCATTTCCAGTGTGTTTAAGTATTTCTTGGATTTTTACCAAAGTAATGAGCATCATGACAACATTAATATCTAGGCAATAAAAAAGGTCAGAGTTAgctataaacatatattttaatagtAGTTTTCCTAATTATATAATCACTGTAGCGAATTTAAAACATTGAGTAATTTCTAAAGATGGAAGAGACTgggaagcaaaataaaaaaattatctgtAATTCTACCAAAGTTAACTTCTTCCAAGCTTGGCTTCAATGCACATTATATGTTATGACCTATTCTCTTCAATTAATGTATTGAGAATAttccattttaataaaaattaatttgacaGCATGAC