Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Sgo1
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name shugoshin 1
Also known as 3300001M08Rik|Sgol1
Coordinate chr17:53981814-53996432
Strand -
Gene summary Predicted to enable kinase binding activity. Acts upstream of or within centriole-centriole cohesion. Located in kinetochore. Is expressed in several structures, including alimentary system; brain; eye; genitourinary system; and heart. Human ortholog(s) of this gene implicated in chronic atrial and intestinal dysrhythmia. Orthologous to human SGO1 (shugoshin 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Sgo1

Retroname Coord Strand Genomic Region ENSG
Sgo1P1 chr12:60573132-60574006 + Intergenic
 ENSMUSG00000113549 UCSC
Sgo1P2 chrX:91637346-91639504 + Intragenic
 ENSMUSG00000080737 UCSC

Expression

Transcript Sequences

>NM_028232.2
AGCCAATGGATACGCGTAACGCAGAATTTCGAATGTGGCGGCGGTAGCTGCGGAGCGCGGCGGAGCGGGAGGTTGCATCTGCTCGTCCGGACCTGAGTGGCCGAGatgaatttcactatgtagcccaagcatAAATCTATGACCCACCTGCCTTAGCCTTTTTAGTAGCTTGGATTATTCTACAACACCTGACTTAATATTTCTAAGCAGAAAATCAAAATATTGCTTTTTTTGAAACAAAGATGGCTAAGGAAAGGTGTCAGAAAAGGTCCTTTCAAGATACCCTTGAAGACATTAAGAatcgaatgaaagaaaaaaggaataaaaatttggCGGGGATTGGGAAACGCAAGTCCTTTATTGTTGCACCGGGCCAAGTACCCACTAACACTGCTACACTACTGAGATATTACCAAGATAACAACAGGTTGTTAGTCTTggctttggaaaatgagaaatccAAAGTGAGAGAAGCACAGGATGTCATCCTGCAACTGAGAAAAGAATGCTACTACCTTACTTGTCAGCTGTATGCATTGAAAGAGAAGCTAACTTCCCGACAAAGTGAAGAAACTACTCAGAACTGGAAAGGACGTCCCTCAGACGTGGTCTCCAGCATTGACAATACGACCAGGGACTTGTCAGGGAAGTCCTTACAGCAAATTGCTGTTGAAGAAACTGATTGTCCTTACCAAACCACAGAACCAAGTCCTGCTGTTACTCCAGAGACACAGGGTTGCGATTTTGATTCAGGTAAAGTTGAGTCTACTGATGAAGTCTTACCCAGAACTATATCTATCCGTCGCCATTTAAGGAAAGATTTTAGTAATATAAGCCACTCCACGACTTTGGAGGATTGTAAAGCCAGTCCAAGAGTGGCACAGTCTCTGGAAGTTAAAGGAAGTAGATGTAGAGAAGTAACCGTAACCCTGCACAGACTTGAAAATGTTTGTCTGTGGAACAAAGACCAAATTAGCTTATGTTCTAGACTGATTAACCCAGCAAAGATTACTGAAACAGAAGTCATTTTATCATCTAAACCTGAACAAATAGAAAGCAAGCATAAACGTGCACGAAAAAGAAGAGCAGAGCAAAGAAGAACCAAgcagagatgcaaatcaaaatccTCATTGAGGAGTAAGgggaacaaaaacaaagataagCAGGGTTTACCCCCTACTACACTGGATGGAGGTATTGGTTCCTGTGATGCTTACGATTTTAATCTAAAAGGGACGGTCCACCCCACCCCTTTCCGACAAAAAATGAACAATGGCTGCAACAAAGAAACGGATAGCAGCAACTCAGAAGTGAGTGACCTCGAATGCAGTACCTCTGAGGATGAGTCTGATGACCTCTACCTGCCTCCCTCCAAGCGCTTGCGAGActacagagagtcagagagagcagTTACCAGGCCTCGGTCTAAAAGAGGACTTCAGTACCCAgatgggaaagagaggaaggaggtgcTGCCATCTACAGCTCCTACTGGTATCCCACCTGAGACTCAAGAGTCACCTCGTTGTAGCCTAAAGGATGTCACCAATATCCTGCAGTGTCCTAGAGTGAAGATCAGGAAGCCTTCTCTGCCTCCAAAGCGGCGTGAAGACAGCCCAGCAGTGGCTCTGACTAAACGCAGGTGTAGCACCATCAAAAGCTATAAAGAGCCAACACTCGCTTCAAAGCTAAGAAGAGGGGACCCTTTCACGGACTTGTGTTTCTTGAATTCTCCTATTTTCAAGCAGAAAAGGGGTATGAGATGTCCTAAAAGAAGAACCAAGCAAACACAGTAACTCATTTGATTAGCTACTGTTTAAGGTGATCCTTCTTttttacctaataaaatattattagacAGTGCACAATGGGCAGAACCTCTACCAGGCTCTGATCAGGAGGGTCTCTTGGACATATACTTTGTATGGACTATTATATTACCAACATCTAAAACTTCTCCAGCATCCTTATTTTTTCCTTAAGCAGGAGAATTGCAGAGTACAAAACTTGCATCGTAGAAAACTTACATAGGATGTAGATCTTTCATAAATCCTTACCATCACAGTAAGACATAAGTGGGTGAGGATCCCTTCTGTCATTGATTCTTTCTGTAAACTGTGTATCGAATGGTGATTAAGAGAATTAATGAATTGGGTTCTGGAACAAGGTAACTGTTGTGAACTGTGAGTACTATGCTATTGCTCAGCAGAATAATAGCACTGTCGTGGACCTCAGGCTAGCCCTTTGTGTGGTCAGTCTACAGTGTAAATAAAGGTGTGAATAAAGGGGCTTCTGGCTTTGATATGTGAACAAAATAAAAGTATCCAGTTCAGAACATTGaatctttatgtgtgtatgtatgtcttcaAACTTAAATCGTTGTAACTGGTCCATTGTTAAAGGTGAAGCCTATGGTGACCGCattgtgttttccttttgctCTTAATGGTCAGTTACTCTTGATTATCTTCCTTTCTGGCCTTTACCACTCCCAACTTAGCTGGAACCTCTTCTGTCTTCCCTGGTTCCCCTTTTCTTCCCATTAGATTTGTCCTGTCAAGTTTTCCCAACTGAAGCCTCCAGGGCCAACATCAAGGCATTTCAATTTTCATTAAATCGGAAGAACGTTTGTCTCCTATGGGCAAGGCCCAGGGATAGATAAATACCACTCAAACAGGAGATTTTAAGCTATCAGAAGGGCCTTCTGGTGGTCATCTCAGATTTTACCCACAACTGCATGGCTTCCTACATTTACCATCAAACTGAAAGTGTGGCTCTGTCACTCACGTGCACCCCTCTCGCCCATCACAGCCTTACATTTTTAGCCACTGTTTACAGCTCTGAGGATTGGACCCACAACTCTGTGTGTGGTAGGAGTAGTCACAGCAATCCTCAGCCACTCCATTTATCATTTTCTAATGTCATGGTATCTTGAAAGTATCCATTTTAGCTAAATATAAATGCAGTTAAAAGTCTAGTTTCAGCCCAGTTAGCTGCATGTAGCGGTGATTACCATAGTACAGCCTACATAGAGAAAGGCCCTATCTGTTTTGGACAAGCTAAATTTACTTTTTCTGTAGTTAAcataaagtagaaaatatttgGATTAAATTTTGCTACTTGGCTTGCAGAACCTCAGATATTTATTTTCTCCCCTTTTGTCAAAAAAGCTTTCCAAAGGCTGATATGTTGCATACATGTAATTTCAGCAATATAGAGGCTGAGTCAGGTACTACggatctcaaaaaccaaacaaacaaaaatccacttCCTGCTATAGACATTTAAATGGCTACTTCGTAGGTCAGCATGTCTAGTGTCATGGTGACGCTCACTCACTCCATGCCAGTCACTTATCTTAAAGCTGGTATTAGGCCTTTAgtcttcttcatctttctttatTCTTGCTGTAGTGTTTACTCATGGGCTATTAAGGGGTTTGTGTCAACATTTTTATGAaacatgtatttttataaaatatgtattgtattatttatgtttataattGACTTAAGAGTTTGAGACTTCCCTGGTTGATAGATATAGTTATTTCTGTGGTTGTATAATATGATATAAATAAACCAGACTTAATGACCTCTTTTGAGACAT