Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Lrpprc
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name leucine-rich PPR-motif containing
Also known as 3110001K13Rik|Gp130|Lrp130|Lsfc
Coordinate chr17:85012675-85098214
Strand -
Gene summary Enables RNA binding activity and single-stranded DNA binding activity. Acts upstream of or within negative regulation of mitochondrial RNA catabolic process and regulation of mitochondrial translation. Located in mitochondrion and nucleus. Part of ribonucleoprotein complex. Is expressed in several structures, including brain; genitourinary system; heart; liver; and skeletal muscle. Human ortholog(s) of this gene implicated in French Canadian Leigh disease and Leigh disease. Orthologous to human LRPPRC (leucine rich pentatricopeptide repeat containing). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Lrpprc

Retroname Coord Strand Genomic Region ENSG
LrpprcP5 chr12:22716701-22716884 + Intergenic
ENSMUSG00000114107 UCSC
LrpprcP3 chr12:20854516-20854709 - Intergenic
ENSMUSG00000101813 UCSC
LrpprcP1 chr12:19613736-19613918 - Intragenic
N/A UCSC
LrpprcP2 chr12:20195495-20195664 - Intragenic
N/A UCSC
LrpprcP4 chr12:21673982-21674175 + Intragenic
N/A UCSC
LrpprcP6 chr12:24062527-24062710 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_028233.2
GCCAGGCTCGCTGAGAGCCGGGGCGCTGGACAAGGGAACAGGGACACTGTGAACGGAAGACAAAAAACAATGTATAGTAAAACAGAAGGCGGATCCAGGGTATCCCGCGAACTCGGCTTGCCTCTCCCGTGAGCCTTGGCGGGGATCTGCCTCCTCCTCCGCTGGACGCCCTCGGTCCTTAGTTTGTCCCACTAGGGGCGACCGGGTCGTCACGTGCtcctccaggtcctctgcaggagcgtGCATCCTATCCTGCCTTGGGTACGCTGAGCCATGGCAGCCCTGCTGAGACCCGCGCGTTGGCTGCTCGGGGCCGCGGCGGCCCCGCGCCTCCCGCTGTCCCTGCGCCTCCCTGCGGGCGTCCCGGGCCGGCTGTCCTCCGTCGTCCGGGTCGCGGCTGTTGGTAGCCGGCCGGCTGCAGGAGAGCGTCTGAGCCAAGCCAGATTGTATGCCATCGTTGCTGAGAAAAGGGATCTTCAAGAGGAGCCTGCTCCTGTGAGAAAGAACAGCAGTCAATTTGACTGGGCTCTGATGAGACTGGATAATTCTGTCCGGAGAACAGGCCGCATCACAAAGGGGCTTCTGCAGAGAGTCTTTGAGAGCACGTGTAGCTCAGGTAGCCCAGGGAGCAATCAAGCTCTGCTTCTGCTGCGCAGCTGTGGCTCGCTCCTGCCCGAACTGAGTCTCGCCGAGAGGACAGAGTTTGCTCACAAGATCTGGGACAAACTTCAGCAGTTAGGTGTCGTATATGATGTCAGTCATTACAATGCTTTACTTAAAGTATATCTtcaaaatgaatacaaattttCACCTACTGACTTCCTGGCAAAGATGGAGGGAGCAAACATCCAACCAAATCGAGTAACATACCAGAGGCTGATAGCTGCCTACTGTAATGTTGGGGACATTGAAGGTGCCAGCAAGATCCTTGGATTTATGAAAACGAAAGACCTTCCGATCACAGAGGCCGTGTTCAGTGCTCTCGTCACAGGGCATGCGAGAGCTGGGGATATGGAAAATGCAGAAAATATTCTCACAGTGATGAAACAGGCCGGCATTGAGCCTGGCCCAGACACGTATCTGGCCTTGTTGAATGCACATGCTGAGAGGGGTGACATTGGCCAGGTTAGGCAGATtctggagaaagtggagaagtcAGACCATTACTTCATGGACCGCGACTTCTTGCAGGTTATTTTTAGCTTCAGTAAGGCTGGCTACCCTCAGTATGTCTCAGAAATACTGGAGAAGATTACCTATGAGAGACGGTCTATTCCAGATGCAATGAACCTCATTTTGTTTTTAGCCACTGAGAAGTTAGAAGACACTGCGTTCCAGGTTTTATTGgcattacccctgtccaaggacgAGAGCTCCGATAACTTTGGCAGTTTCTTTTTGCGGCACTGTGTGACTCTGGATTTGCCCCCTGAGAAGCTGATAGACTACTGTCGGAGGCTGAGGGACGCCAAGCTGCACAGCTCCTCACTGCAGTTCACGCTGCACTGTGCTCTTCAAGCCAATAGGACAGCTTTGGCAAAAGCAGTGATGGAGGCTTTGAGGGAAGAAGGGTTTCCTATCCGACCGCACTATTTCTGGCCGTTGCTTGCTGGgcatcagaaaacaaaaaatgttcAAGGAATAATAGATATCCTCAAAATAATGAACAAAGTGGGAGTGGATCCTGATCAGGAAACATATATAAACTATGTGTTTCCGTGCTTTGATAGTGCACAGTCAGTTCGAGCTGCTTTGCAGGAAAATGAATGTCTCCTCGCAAGTAGTACCTTTGCTCAAGCTGAAGTGAAGAATGAAGCAATAAATGGGAACTTACAGAACATTTTGTCATTTTTGGAATCGAATACATTGCCTTTCTcgtttagttctttgagaaacagCCTAATCCTAGGCTTCAGGAGGTCGATGAACATAGATCTTTGGAGCAAGATAACAGAATTGTTGTACAAGGATGAACGCTATTGCTCAAAGCCTCCGGGACCAGCGGaagctgttggctattttctttataacTTGATTGACAGCATGAGTGACTCAGAGGTACAGGCCAAGGAGGAGCGTTTGAGACAATACTTCCATCAGCTGCAGGAGATGAATGTTAAAGTTCCTGAAAACATCTACAAAGGCATTTGTAATTTGCTGAATACCTACCATGTTCCTGAATTGATTAAGGATATTAAGGTTCTGGTTGACAGAGAGAAGGTAGATTCTCAAAAAACTTCTCAAGTTACCTCATCTGATTTGGAATCAACACTTGAGAAACTCAAAGCTGAAGGCCAACCTGTAGGATCTGCCCTGAAgcagctcctgctgctgctctgctCAGAGGAGAATATGCAAAAGGCCCTTGAGGTGAAAGCAAAATATGAGTCAGACATGGTTATTGGTGGCTATGCAGCATTAATAAATTTGTGCTGTCGACATGATAATGCAGAAGATGCGTGGAACTTGAAACAAGAAGTTGACCGCTTAGATGCTTCGGCTATTCTTGACACTGCCAAGTACGTAGCCCTTGTAAAAGTACTGGGAAAGCACAGCAGACTCCAAGATGCTATTAACATTCTAAAGGAGATGAAAGAGAAGGATGTTGTTATCAAAGATGCAACAGTCTTgtcctttttccacatcctcaatGGTGCAGCTTTAAGAGGTGAAATTGAAACAGTAAAACAGCTGCATGAAGCCATCGTGACTCTTGGGTTGGCAAAGCCGTCCAGCAACATAAGCTTCCCGTTGGTCACTGTGCACCTGGAAAAGGGTGACTTACCTGCTGCTCTTGAAGCCAGCATTGCCTgccataaaaaatataaagtgtTACCCAGGATTCATGATGTCTTATGTAAGCTAGTAGAGAAAGGCGAGACTGATTTGATCCAGAAAGCAATGGACTTTGTGAGCCAAGAACAAGGGGAGATGACGATGCTCTACGACCTCTTCTTTGCTTTCCTGCAGACGGGGAATTACAAAGAAGCTAAGAAGATCATTGAGACTCCAGGCATTAGAGCTCGGCCTACAAGACTCCAGTGGTTTTGTGATCGATGCATTGCCAGTAATCAGGTTGAAGCTCTTGAGAAGTTGGTAGAGCTGACTGAGAAGCTGTTTGAGTGTGACAGAGACCAGATGTACTACAACTTACTGAAGCTATACAAAATAAGCAGTGACTGGCAAAGAGCGGATGCTGCGTGGACCAAAATGCAAGAAGAGAACATTATCCCTCGAGAGCGGACACTGCGGCTCTTAGCCGAGATCTTGAAAACCAGCAACCAGGAAGTTCCTTTCGACGTTCCGGAGttgtGGTTTGGAGATGACAGACCTTCCCTGAGTCCATCCTCACGCTCAGCAGGAGAGGACGTTACTGAGAAGACGTTGTTGTCTAACTGCAAACTAAAGAAGAGTAAAGATGCATATAATATCTTCCTTAAAGCCGAAAAGCAAAACGTTGTATTTAGCAGTGAAACTTATAGCACCTTGATAGGCTTGCTGCTGAGTAAGGACGACTTCACCCAAGCAATGCACGTGAAGGATTTCGCTGAGACCCACATCAAGGGCTTCACACTGAACGATGCTGCCAACAGCCTCCTCATCATAAGGCAAGTTAGGCGGGATTATTTGAAAGGGGCTCTGGCAACTCTGAGAGCAGCCTTGGATTTGAAGCAGGTTCCGTCCCAGATCGCCGTGACCCGCCTCATCCAGGCGTTGGCCTTGAAGGGTGATGTGGAAAGCATAGAGGCCATTCAGAGAATGGTGGCTGGACTTGACACGATTGGACTCTCAAAAATGGTTTTTATCAATAACATCGCTTTGGCCCAGATGAAGAATAATAAACTTGATGctgccatagaaaacattgagcACCTGCTTGCTTCCGAGAACCAAGCCATAGAACCTCAGTACTTTGGCTTGTCGTATCTATTCAGAAAAGTGATCGAAGAGCAGATGGAACCAGCGCTAGAGAAGTTAAGCATCATGTCTGAGAGAATGGCGAATCAGTTTGCACTTTACAAGCCCGTCACTGATCTATTCCTGCAGCTTGTGGATTCAGGCAAGGTGGATGAGGCCAGAGCTCTCTTAGAGAGATGCGGTGCCATTGCCGAGCAGAGCTCGCTTCTGTCGGTGTTCTGTCTGAGGACTTCTCAGAAACCGAAAAAGGCACCAGTTCTGAAGACTTTGTTAGAACTGATTCCTGAGTTACGTGATAACGATAAAGTATATTCTTGCAGCATGAAAAGCTATGccttaGACAAAGATGTGGCCTCGGCTAAAGCACTGTATGAGTATTTGACAGCCAAGAACTTGAAGCTAGATGACCTGTTTCTCAAGCGCTATGCAGCTTTGCTCAAGGATGTCGGCGAACCAGTCCCCTTCCCCGAGCCCCCTGAAAGCTTTGCATTTTATATAAAGCAACTAAAGGAAGCAAGGGAAAGCCCTTCATGAGAGAAGCAGCgcggctgtgtgtgtgtctatgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtctatgtgtgtatatgcgcgCGCACATGCCTATGTCTAAATGTTATTTCTAAAATGTACTTGAGAGGAAAATAAACCAATGAAAATGTAA