Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name TSN
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name translin
Also known as BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN
Coordinate chr2:121755651-121767853
Strand +
Gene summary This gene encodes a DNA-binding protein which specifically recognizes conserved target sequences at the breakpoint junction of chromosomal translocations. Translin polypeptides form a multimeric structure that is responsible for its DNA-binding activity. Recombination-associated motifs and translin-binding sites are present at recombination hotspots and may serve as indicators of breakpoints in genes which are fused by translocations. These binding activities may play a crucial role in chromosomal translocation in lymphoid neoplasms. This protein encoded by this gene, when complexed with translin-associated protein X, also forms a Mg ion-dependent endoribonuclease that promotes RNA-induced silencing complex (RISC) activation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2012]

Retrocopy(s) from TSN

Retroname Coord Strand Genomic Region ENSG
TSNP1 chr7:93777852-93778358 + Intergenic
ENSG00000225898 UCSC

Expression

Transcript Sequences

>NM_004622.3
GGTCGTGGCGTAAGACCGGGGGGACGCGGCGGTAGCGGCGGCCGTTGCGATTGATTGCGCTGGTTGCCTGCGGCGTCCACTTCCTTGGCCGCCCTTGCTACACTGGCTGATTGTTGTGCAGCCGGCGCCATGTCTGTGAGCGAGATCTTCGTGGAGCTGCAGGGCTTTTTGGCTGCCGAGCAGGACATCCGAGAGGAAATCAGAAAAGTTGTACAGAGTTTAGAACAAACAGCTCGAGAGATTTTAACTCTACTGCAAGGGGTCCATCAGGGTGCTGGGTTTCAGGACATTCCAAAGAGGTGTTTGAAAGCTCGAGAACATTTTGGTACAGTAAAAACACATCTAACATCTTTGAAGACCAAATTTCCTGCTGAACAGTATTACAGATTTCATGAGCACTGGAGGTTTGTGTTGCAGCGCTTGGTCTTCTTGGCAGCATTTGTTGTGTATTTGGAAACAGAAACACTAGTGACTCGAGAAGCAGTTACAGAAATTCTTGGCATTGAGCCAGATCGGGAGAAAGGATTTCATCTGGATGTAGAAGATTATCTCTCAGGAGTTCTAATTCTTGCCAGTGAACTGTCGAGGCTGTCTGTCAACAGCGTGACTGCTGGAGACTACTCCCGACCCCTCCACATCTCCACCTTCATCAATGAGCTGGATTCCGGTTTTCGCCTTCTCAACCTGAAAAATGACTCCCTGAGGAAGCGCTACGACGGATTGAAATATGACGTGAAGAAAGTAGAGGAAGTGGTCTATGATCTCTCCATCCGGGGCTTTAATAAGGAGACGGCAGCAGCTTGTGTTGAAAAATAGGAGGCTCTCCTTGCTCCTGGCCTTGCTGACCTCAGCGGTTGCCAGGAAGGGGTGAGCACAGAGTGCCTCTTACGGTAGTTAGGATGCTCAGTTGCTAAACACTGCGCTTTATTTTCTTAACCAGTTGTGGTGTGAGTATCAGAATTGAAACACTTTTTTGGGGGTAAAAAATATAGCCTTTACATGGACAGAATTTTTTTTGTTGTTTCAGTGAATATGCCTGTAATTCAGTGTATTTCAGTTCCGTCAGAAAGTGTAAATGTTAGTTTCTTGGTAAAGTCCTTTTCTTGCTTACCTTGACTGTTGATGTACTGATTGAGAAGTTCATTGTCTCGTTTGTGATTCTTCCAGATGTGATGCTTGATATTTTCTATATGCGAGTTAGCCATCCACACCCAGGCATAGCCTGGATACAGTATAAAAATAGATAATTAAAAAGATGGTTGCCAAGCAAGGAAAACTTATTTTATATTTTCCCTTCCTTATTTTAAGCATTGTGAGTAAATCAGATGTTGAATTCTTTTGCCAAGGGAATTATAGCTGCAGGTTCTCTCTCACTGCCATCAAACTGTAAAAGATTAAACTGCGAAGTCAAGCTCAACAGATTATTTTGGAAAGTTTTTGTATTAAGGGATTTAGTAACATCATTTTGTTTTCCACCAGGCAGGGAGTAGGGCTTAGTGTTTTAAAACACCTCTGCTTTCTGATGTTGCCTTAATATTCTGCTATTGCAGCAATTAAAAATTGTCTTCATGTACATTTGGAACTAACACGTGATGTGATATATTCCTAAACTATGAAACCTTTTTCCTAGTAGTCAGCTAGATCATTTGTTCTGGGAGTATAAAGCCACCCACGTAAGTTAATAAGCAAAATCCTGACTATTATGTTGTTAGAGAAAAATGCTTTGCTTTGTCTGGAAGAAAGATAAAATAGTGAATTATAAATAAGTCAggccgggcgtggtggctcacacctgtaatcccagcacactgggaggccgaggcagggggactgcttgagctcaggagttcgagaccagcctgggcaacaaagtgagactccatctctatataaaaacaaaaaCCACGAAAGCACACACAAAATAAATCAGTGGGATTTGGTAATGTGTTTTAGAGTAAGAAATTTCAGGTTGTTGGTGACTATCCCAACAGTCATGTTTTAAATGTACAGTTTGGGGCAAGTCATGTAAATACTGTTGGTGGTCTTCCCCACACGCCCCAATTTTCAGGTAGTACTAAGAGTATGTGCCAGGAAACTCTTGCTATTGAATTGAGATGATTAAAATGGTGACTTAATCCGTAGTTATTTTGCACCCACTGAAAGGAAAGTGCTTTCCAGAATAATATGAAGTATCTAAAAGTGTCACCTTTTCTTGCCTGATCAACAATTTGGGCTTCCTGTTTGTACAAGGGGCCATTTGGCATACCTTTCACAGCTTTTATCAGGCCAAGTTAAAGGCTGACTACATTTTTTCATCATGAGGAAAGCAGTTGAAATGAGGCATGAGTTACTGTGCATTGGGATTTTAGAACAATTTTCTTGTGACAGCTCTTTTTGTGAAGTTAGGTTCTTAAAAGTGCCCATGATGGTCACTTAAAATGTGCAGTAATAGCACTGCCAGGATCAAGCATGAAAGGCTTTTAAATTAGATCATCCCACAGACAATACGTTTGATAATAGTTTTTTCTTTTAACCTCTTTAAGTATTGATTCTGCTTGAGAATATTGAAGTACTTGCCAGAAGTTGTGGATTTCAGTTTTAACAAATGCTATTAAAGTGGAGAAGCACACTCTGGTCTTGGAATTCCATTTGAGGATTTAGAAGTGTCATGTTTATAACTATTCAGTTGTGTTTGTTGCTGGCTTGTTGTAAAGCAATAAAATTTTTTTGGTCTTTTTGTAAGTGAGTGTGCTGCTGTAAGAAATCTCCCATGTGCATAACAAATTCTGAATATTTTTTGAGGCTAAAGAAGACCGGGGTGACAAGCAGATACTGCTGTGTAATGGTTACACTAACCAAAAGACACCAGCCACTCAGAGTTCTATACTGTAAAGCGCAGATAACATTTGTGTGTTATACCTTGATTGGGGAATTAAAAGTCATTTAACTGAAGATGTTGAGAAACCTGGGCTCTGGTTTTAGTATACCGGAATTACTTTTTTCCAATTTTAGAAAATCAAGCAGGTTAGAGAAAATAGAGATGAATTAGGGGACACTGTCTTATGGATTCATTTATAAGAAGAGAACCAGCCATATACACTTGGGGAGATTTGCCACATCTTAAACTTGAATAATAGTATGAGTAATGCTTAAGGGAGTTTAATAGAGAAGGAAAGCTTTGGCAGTGTTTTGAGAACTTAAGTGGCTAAAGAGATGAGACAAACATGCAGGTCGCTACTGGCATAGTTTCATAATTGTGTACTCGGAAATTAAAGTTTGCTTGTTTCTTGGTCTGGATTAAA