Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name U2AF1
Plot displaying the genomic locations of a parental gene (in chr21) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name U2 small nuclear RNA auxiliary factor 1
Also known as FP793|RN|RNU2AF1|U2AF35|U2AFBP
Coordinate chr21:43092956-43108291
Strand -
Gene summary This gene belongs to the splicing factor SR family of genes. U2 auxiliary factor, comprising a large and a small subunit, is a non-snRNP protein required for the binding of U2 snRNP to the pre-mRNA branch site. This gene encodes the small subunit which plays a critical role in both constitutive and enhancer-dependent RNA splicing by directly mediating interactions between the large subunit and proteins bound to the enhancers. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008]

Retrocopy(s) from U2AF1

Retroname Coord Strand Genomic Region ENSG
U2AF1P1 chr15:35092457-35093302 + Intergenic
ENSG00000259397 UCSC

Expression

Transcript Sequences

>NM_006758.3
GACGTCTCCCGAGggcgtcggcagggtcggcggcgtcggcagcagtgtcgacggcagcggcggcggcggGTGGGAAATGGCGGAGTATCTGGCCTCCATCTTCGGCACCGAGAAAGACAAAGTCAACTGTTCATTTTATTTCAAAATTGGAGCATGTCGTCATGGAGACAGGTGCTCTCGGTTGCACAATAAACCGACGTTTAGCCAGACCATTGCCCTCTTGAACATTTACCGTAACCCTCAAAACTCTTCCCAGTCTGCTGACGGTTTGCGCTGTGCCGTGAGCGATGTGGAGATGCAGGAACACTATGATGAGTTTTTTGAGGAGGTTTTTACAGAAATGGAGGAGAAGTATGGGGAAGTAGAGGAGATGAACGTCTGTGACAACCTGGGAGACCACCTGGTGGGGAACGTGTACGTCAAGTTTCGCCGTGAGGAAGATGCGGAAAAGGCTGTGATTGACTTGAATAACCGTTGGTTTAATGGACAGCCGATCCACGCCGAGCTGTCACCCGTGACGGACTTCAGAGAAGCCTGCTGCCGTCAGTATGAGATGGGAGAATGCACACGAGGCGGCTTCTGCAACTTCATGCATTTGAAGCCCATTTCCAGAGAGCTGCGGCGGGAGCTGTATGGCCGCCGTCGCAAGAAGCATAGATCAAGATCCCGATCCCGGGAGCGTCGTTCTCGGTCTAGAGACCgtggtcgtggcggtggcggtggcggtggtggaggtggcggcggacgggagcgtgacaggaggcggtCGAGAGATCGTGAAAGATCTGGGCGATTCTGAGCCATGCCATTTTTACCTTATGTCTGCTAGAAAGTGTTGTAGTTGATTGACCAAACCAGTTCATAAGGGGAATTTTTTTTaaaaaacaacaaaaaaaaaaacatacaaaGATGGGTTTCTGAATAAAATTTGTAGTGATAACAGTA