Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name UFD1
Plot displaying the genomic locations of a parental gene (in chr22) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ubiquitin recognition factor in ER associated degradation 1
Also known as UFD1L
Coordinate chr22:19449911-19479193
Strand -
Gene summary The protein encoded by this gene forms a complex with two other proteins, nuclear protein localization-4 and valosin-containing protein, and this complex is necessary for the degradation of ubiquitinated proteins. In addition, this complex controls the disassembly of the mitotic spindle and the formation of a closed nuclear envelope after mitosis. Mutations in this gene have been associated with Catch 22 syndrome as well as cardiac and craniofacial defects. Alternative splicing results in multiple transcript variants encoding different isoforms. A related pseudogene has been identified on chromosome 18. [provided by RefSeq, Jun 2009]

Retrocopy(s) from UFD1

Retroname Coord Strand Genomic Region ENSG
UFD1P1 chr18:26830751-26832500 - Intergenic
ENSG00000266184 UCSC

Expression

Transcript Sequences

>NM_001035247.3
GTACCGGCTTggcgcggcggcagcggcagcggcggctgggagagcggtcggcggGGTTTCTTCGTTGCATTGCCTGAGAGGAGCGGAGTCTGCCAGGTGGTGTCCATCATGTTCTCTTTCAACATGTTCGACCACCCTATTCCCAGGGTCTTCCAAAACCGCTTCTCCACACAGTACCGCTGCTTCTCTGTGTCCATGCTAGCAGGGCCTAATGACAGGTCAGATGTGGAGAAAGGAGGGAAGATAATTATGCCACCCTCGGCCCTGGACCAACTCAGCCGACTTAACATTACCTATCCCATGCTGTTCAAACTGACCAATAAGAATTCGGACCGCATGACGCATTGTGGCGTGCTGGAGTTTGTGGCTGATGAGGGCATCTGCTACCTCCCACACTGGATGATGCAGAACTTACTCTTGGAAGAAGGCGGCCTGGTCCAGGTGGAGAGCGTCAACCTTCAAGTGGCCACCTACTCCAAATTCCAACCTCAGAGCCCTGACTTCCTGGACATCACCAACCCCAAAGCCGTATTAGAAAACGCACTTAGGAACTTTGCCTGTCTGACCACCGGGGATGTGATTGCCATCAACTATAATGAAAAGATCTACGAACTGCGTGTGATGGAGACCAAACCCGACAAGGCAGTGTCCATCATTGAGTGTGACATGAACgtggactttgatgctcccctgggctacaaagaacccgaaagacaAGTCCAGCATGAGGAGTCGACAGAAGGTGAAGCCGACCACAGTGGCTATGCTGGAGAGCTGGGCTTCCGCGCTTTCTCTGGATCTGGCAATAGACTGGATGGAAAGAAGAAAGGGGTAGAGCCCAGCCCCTCCCCAATCAAGCCTGGAGATATTAAAAGAGGAATTCCCAATTATGAATTTAAACTTGGATGAAGCTGGAGGCAGATTCGTCGCTTTCTCTGGAGAAGGACAGTCATTGCGTAAAAAGGGAAGAAAGCCCTAAGTGAGGACTGTTGGCTGATTGGAAAATAATAAAAGAATCATTTGCAACATCTTGGCTTTTAGTTACTGGCACTGACAGGGACGAGCCTCATCAGAGAATACTCTGTTACTTAAGATTTATTTAGAGTTACCTAAGAATTATTAAGTTTGACTTGGAAGTGGAGCAGCAGGACTTTGTAGTTGTATGCTTGATTTGGGGAAAGACAAAGAGCTGTCCCTGAGGGCCTGTAGATAGCTGCCTCCTCACCTCTTCACGCTTTCAGCTTGAGGGGAGCTCCCACTGCCTCAGCAGGAGCAATTCTGCATCCCTAATTCTGTCAAAACCTATGAAGGTGACTAAATTGTCTAACATGAAGTGTTCTTTCTTTTTCTTCATTTATCCTTTCTTTTCCTACATCAATTGCATAGGTGTCAGTCTTTGGCCTAAAAAAAGGCTTTAAATAGACATGTGTTCTATAAGTAGTGGCTGTCCCACTACTGTGGCTGCAATTTAAGTATTTGACAAAGAATGTTTCTATTTTTATTTTACATATTTTTTTCAAAAACACCACTCAGAAGAACCTGATCTGAATGAGTTTGCACTTTTATTCTCATTTCATATGGACATAACTGGCTCCTTAGTGAACCTGTTCATAGTGAAACAACTCCATGGAGAAGCAAACATGTGAATGTTAGAATGAACAAATGCTAAAGAGATGTTCCTCTCCTTCTTCCCTACTCCCCAACTCCCAATTTTAATTTATTAAATCATCCAAGCTTC