Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Dppa4
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name developmental pluripotency associated 4
Also known as 2410091M23Rik|ECAT15-1
Coordinate chr16:48104098-48114655
Strand +
Gene summary Predicted to enable chromatin binding activity. Acts upstream of or within lung-associated mesenchyme development. Located in nucleus. Is expressed in several structures, including alimentary system; diencephalon lateral wall ventricular layer; early embryo; gonad; and nose. Orthologous to human DPPA4 (developmental pluripotency associated 4). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Dppa4

Retroname Coord Strand Genomic Region ENSG
Dppa4P6 chr18:9916841-9918173 + Intergenic
ENSMUSG00000092039 UCSC
Dppa4P2 chr2:39043911-39044834 + Intragenic
ENSMUSG00000107833 UCSC
Dppa4P1 chr2:122044592-122045854 - Intergenic
ENSMUSG00000079966 UCSC
Dppa4P3 chr7:19682604-19683499 - Intragenic
ENSMUSG00000109281 UCSC
Dppa4P8 chrX:62077631-62078206 - Intergenic
ENSMUSG00000082965 UCSC
Dppa4P4 chr17:38390638-38390996 + Intergenic
ENSMUSG00000092461 UCSC
Dppa4P7 chrX:5520120-5521024 - Intergenic
ENSMUSG00000082326 UCSC
Dppa4P5 chr18:49639714-49639895 + Intergenic
N/A UCSC
Dppa4P9 chrX:86562893-86563369 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001018002.1
GGAGATTTTGAAAAGCCGGCTGAGGTCAGAGGTCTTTTGGAAGCTGGGAGAACTTTCTTTCGGAGGATTCATCTATTCTCAAGATGGAGACTGCTGGAGACAAGAAGTGGAGCGCAGAAGAGCCGAAGGAAGAAGTGGAATTGCAGATGTCTAGTCAACCAAGCACGGCTCCTGCAAAGGCTAAAGCAAcggggaaaaaacaaaagaagtcgGAGACAGATAATGGTTGTAAACCAAAGGAGGGAAAACCACAAGACACTGAGACGCCAGGACAGACTCGTAGGAAGCTGGAGTTGAGGAACGTCCCTGACTCAGCCAAAGACGCCAGGTTGAAGACAGCTCacaaaaaaatgaagactgaaccGGGGGAGGAGTCTGAGGTGACAGTTCCTCTGGAAATGGTCCCTGTGCCAGAGGAGCAGATACCTGCCCTCATTGACCCTCCTATGCTCTATGAGGAAGTCAGCACCACCGTAGTGACTACACCTGCCACTGAGGCCGTGTTAGCATCTTGGGCCAGAATTGCATCCAATGCTAAGAAGTACGAGGCAGTGCCAGCCGATGCTTCGTCCTCATCAGAAGTCAAAGGGGAAATGTGGTGTGTGGTTCATGGGACCAGCCTTCCTGGGAACTCGCGTGGTTGGGTTCGGCTGCAGTTCCACGCTGGACAAGCCTGGGTACCCGATAAGAAAGGAAAAGCCATTGCCCTCTTCCTGCTTCCGGCCTGCACATTTCCACCCCCACACCTGGAGGACAACATGCTGTGCCCCAAGTGTGTTCATAAGAACAAGATCTTGACTAAGAGCCTCGAAGGATAAAGGACAGATCTCTTGTTTGAGCTAGCTGCTGGCGTCACTCACTCTTGTGGTGTGATCAGCAGAGCTGCGGCTGACGCTGAGACTGATAGAAATCTACATCTCTGCCTTTGAAGGTGCCTTTCTCATCCAGAACTTAAGGGATAGTGTAAGTTAGTTGATGCTTAAGTTCACGCAGTTTGAAAAAAGCCAGCGAGGCCACCTCTGCTCGCTGTGATGACTGATCACTGAGAGTGAACTCTTACTCTTTTGTGAAGATAAAAATACATCCTATGTGTTTTGCTGCAAGTAGGTCCTGGGGCAGGAGGATGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCATAACCAGTTCAGCAGTCAACTGTAAAGACTTGGCTTATACCTGTAGCCTCCGCATGCATGTCCTCTTCCCTGGGTTGTAGTGTGTTGTTAGTGTTTAAtacttgtgtttgttttctgctgTTGTAAAATATTACACTAAATCTGGcttgtggcttttgtttttgttatctgAATGGTTAAATTTCCCCTGAGTTCCTTC
>NM_028610.2
GGAGATTTTGAAAAGCCGGCTGAGGTCAGAGGTCTTTTGGAAGCTGGGAGAACTTTCTTTCGGAGGATTCATCTATTCTCAAGATGGAGACTGCTGGAGACAAGAAGTGGAGCGCAGAAGAGCCGAAGGAAGAAGTGGAATTGCAGATGTCTAGTCAACCAAGCACGGCTCCTGCAAAGGCTAAAGCAAcggggaaaaaacaaaagaagtcgGAGACAGATAATGGTTGTAAACCAAAGGAGGGAAAACCACAAGACACTGAGACGCCAGGACAGACTCGTAGGAAGGTACCAATTCCTCCTATTCCAGAGTATCTGCCCCCAGTGAACCTGATTCACCGAGATGTTTTGCGGGCATGGTGCCAGAAGAAACGAGTGAGCAGCAAAGGCCAGaAATTAGATGCTTATAAACGACTCCTTGCAAGGGCTTTCCCAGAACAAATGCTGGAGTTGAGGAACGTCCCTGACTCAGCCAAAGACGCCAGGTTGAAGACAGCTCacaaaaaaatgaagactgaaccGGGGGAGGAGTCTGAGGTGACAGTTCCTCTGGAAATGGTCCCTGTGCCAGAGGAGCAGATACCTGCCCTCATTGACCCTCCTATGCTCTATGAGGAAGTCAGCACCACCGTAGTGACTACACCTGCCACTGAGGCCGTGTTAGCATCTTGGGCCAGAATTGCATCCAATGCTAAGAAGTACGAGGCAGTGCCAGCCGATGCTTCGTCCTCATCAGAAGTCAAAGGGGAAATGTGGTGTGTGGTTCATGGGACCAGCCTTCCTGGGAACTCGCGTGGTTGGGTTCGGCTGCAGTTCCACGCTGGACAAGCCTGGGTACCCGATAAGAAAGGAAAAGCCATTGCCCTCTTCCTGCTTCCGGCCTGCACATTTCCACCCCCACACCTGGAGGACAACATGCTGTGCCCCAAGTGTGTTCATAAGAACAAGATCTTGACTAAGAGCCTCGAAGGATAAAGGACAGATCTCTTGTTTGAGCTAGCTGCTGGCGTCACTCACTCTTGTGGTGTGATCAGCAGAGCTGCGGCTGACGCTGAGACTGATAGAAATCTACATCTCTGCCTTTGAAGGTGCCTTTCTCATCCAGAACTTAAGGGATAGTGTAAGTTAGTTGATGCTTAAGTTCACGCAGTTTGAAAAAAGCCAGCGAGGCCACCTCTGCTCGCTGTGATGACTGATCACTGAGAGTGAACTCTTACTCTTTTGTGAAGATAAAAATACATCCTATGTGTTTTGCTGCAAGTAGGTCCTGGGGCAGGAGGATGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCATAACCAGTTCAGCAGTCAACTGTAAAGACTTGGCTTATACCTGTAGCCTCCGCATGCATGTCCTCTTCCCTGGGTTGTAGTGTGTTGTTAGTGTTTAAtacttgtgtttgttttctgctgTTGTAAAATATTACACTAAATCTGGcttgtggcttttgtttttgttatctgAATGGTTAAATTTCCCCTGAGTTCCTTC