Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Dppa2
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name developmental pluripotency associated 2
Also known as 2410088E07Rik|D19Mgi18|ECAT15-2
Coordinate chr16:48130637-48139876
Strand +
Gene summary Enables chromatin binding activity. Acts upstream of or within several processes, including lung-associated mesenchyme development; positive regulation of stem cell proliferation; and regulation of histone methylation. Located in nucleus. Is expressed in several structures, including early conceptus; gonad; liver; primordial germ cell; and trunk. Orthologous to human DPPA2 (developmental pluripotency associated 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Dppa2

Retroname Coord Strand Genomic Region ENSG
Dppa2P1 chr1:178093735-178095223 + Intergenic
ENSMUSG00000103958 UCSC
Dppa2P8 chr14:99866805-99868166 - Intergenic
ENSMUSG00000115366 UCSC
Dppa2P9 chr16:12226104-12227098 - Intergenic
ENSMUSG00000116013 UCSC
Dppa2P10 chr18:27223717-27224241 - Intergenic
ENSMUSG00000117646 UCSC
Dppa2P11 chr18:32632486-32633516 - Intergenic
ENSMUSG00000108896 UCSC
Dppa2P12 chr18:52232918-52233112 + Intergenic
ENSMUSG00000118046 UCSC
Dppa2P14 chr19:7380264-7380671 - Intergenic
ENSMUSG00000118297 UCSC
Dppa2P13 chr19:41448221-41449886 + Intergenic
ENSMUSG00000044065 UCSC
Dppa2P2 chr2:17173736-17174879 + Intergenic
ENSMUSG00000081525 UCSC
Dppa2P4 chr4:122486746-122488313 + Intergenic
ENSMUSG00000084196 UCSC
Dppa2P5 chr6:62284757-62285103 - Intragenic
ENSMUSG00000107908 UCSC
Dppa2P6 chr7:58619956-58620929 + Intergenic
ENSMUSG00000109221 UCSC
Dppa2P7 chr9:56839709-56840593 - Intergenic
ENSMUSG00000110930 UCSC
Dppa2P16 chrX:22312568-22312736 + Intergenic
ENSMUSG00000083290 UCSC
Dppa2P15 chrX:133806010-133807381 - Intergenic
ENSMUSG00000081292 UCSC
Dppa2P3 chr3:159195228-159196095 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_028615.1
aaggagaagGTGTGGCTGGCTTTTGATTTACTTAAGAACTCAGCTTTTTGCTATCAATTATCTACTGAGACCCAGAGAACTGATAAAATCACGTCAAAGAGAAgagggtggagagaggaggagggggaagagctTAATTGGgccacaggaagacaggaagcagtCATTTACTTATAAAAGAAGTCGGCATTCATTCAGCGGCTGCCTTTGTCTTCTTCCAAGCCTGCCTGAAAATGTCATACTTCGGCCTGGAGACTTTCAACGAGAACCAATCTGAGGAAAACTTGGATGAAGAAAGTGTGATTTTAACGCtggtcccctttaaggaggaggaggagccaaaCACAGACTACGCTACGCAATCAAATGTTTCTTCTTCAACCTTAGACCACACACCACCAGCCCGTTCTCTGGTGAGGCATGCTGGAATCAAACACCCAACCAGAACCATACCAAGCACCTGTCCTCCGCCCAGCCTGCCTCCTATTAGGGACGTGTCCCGGAACACTCTTCGGGAGTGGTGTCGGTATCATAACTTGAGTACGGATGGCAAGaaagttgaGGTCTATTTGAGACTTCGGAGACACTCCTATTCTAAACAAGAATGTTATATTCCCAATACATCTCGGGAGGCCAGAATGAAGCAGGGTCCCAAGAAATCCAAGATAGTCTTCAGAGGAATCGGGCCTCCAAGCGGGTGCcaaaggaaaaaggaggagagTGGTGTCCTGGAAATTCTAACTTCACCTAAGGAGTCCACATTTGCAGCCTGGGCAAGGATTGCCATGAGAGCAGCTCAGTCAATGTCTAAGAATCGATGTCCTCTTCCGTCTAATGTGGAGGCCTTTCTGCCACAAGCCACTGGATCCAGATGGTGTGTTGTCCATGGCAGGCAGCTCCCTGCAGATAAGAAAGGTTGGGTTCGCCTGCAATTTCTTGCTGGACAGACCTGGGTTCCAGACACTCCCCAAAGGATGAATTTTCTCTTCCTGTTACCGGCCTGTATTATCCCAGAACCAGGAGTGGAAGATAATTTGCTATGTCCTGAATGTGTTCACAGCAACAAGAAGATCctaagaaactttaaaattagaagccGTGCAAAGAAAAATGCCCTACCCCCAAATATGCCGCCGTAGACAAGATTTTACTCTGATCTAAAGGGAATGGAAGAATATTCTGTGATCCCTATAatggctaaaaacaaacaaaacaaaacaaacaaacaaaaacctggctGTCAGTCATCAGAAGCCCCTCCTCCTGTCTCCCAGCAGAGTGGAGACTCTGTTGACAAAtcagcatccatctctctaaCAACAGCCCGTTGCATTTTAACATCTCTGACTGACAGCTCCTCATGGCCTCGTGCTGGATTTGCATCACTCTAACAACACCTCGCTGTATCTTAACATCTCTGACAGCTCCTCATGGCCTCGTGCTGGATTGGCTAAATGCTTAGCTACCTGAGAAATGATTCGGTTTTACTGGGTTTGTTTTGCTGTactttttttatataaatttttttttggaggggggagatGGGGAGCAGTTTCAAATTAGCAAAGCAGAaagtactttttttaaaaatatatataattttttttgagtATGGCTTTATCATGTAGCAACTCCAGTGGACCTGGAAATTCTAGGTAGACCAGACACGTGTTGGGTTTTACATGCCTGTACAATACCACTTAGCCAGTACTGATGTATGTTTGACTAGTATAGAGTTCATTGCTTGTGCTAAACAACCTGGGTGTTGACAAGTGTTTATAGAGTGCCATACATTTGAAATCATATAGTATGCTACCGTTCAGATTGGCTTTTACCTAGCAATATGCCTGTGAGAAATATCCATGTCCTCGATTGATTTTTCTTAATGTTGAGATTCCATTGTCCAAGATGTGCCTTATGAATTGATGCTATTACATATGG