Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name MRPL49
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name mitochondrial ribosomal protein L49
Also known as C11orf4|L49mt|MRP-L49|NOF|NOF1
Coordinate chr11:65122321-65127371
Strand +
Gene summary Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. Pseudogenes corresponding to this gene are found on chromosomes 5q and 8p. [provided by RefSeq, May 2011]

Retrocopy(s) from MRPL49

Retroname Coord Strand Genomic Region ENSG
MRPL49P1 chr5:64675017-64675268 + Intergenic
 ENSG00000224296 UCSC

Expression

Transcript Sequences

>NM_004927.4
ACAGAAGGCTGGCGTAGCAGGTAAAGATGGCAGCTACCATGTTCCGGGCTACGCTGCGGGGATGGAGAACCGGTGTCCAGCGGGGCTGCGGGCTACGGCTGTTGAGCCAGACCCAGGGCCCTCCAGATTACCCCAGGTTTGTGGAGTCTGTGGATGAATATCAGTTTGTGGAGCGCCTGTTACCGGCTACCAGGATCCCAGATCCCCCAAAGCATGAACATTATCCTACCCCTAGTGGCTGGCAGCCTCCCAGAGACCCCCCACCCAACCTGCCTTACTTTGTACGACGCTCTCGGATGCACAACATCCCCGTCTACAAGGACATCACGCATGGCAACCGGCAGATGACTGTGATCCGGAAAGTGGAAGGGGACATCTGGGCCCTGCAGAAAGACGTGGAAGATTTTCTGAGCCCGCTGCTGGGGAAGACACCTGTCACCCAGGTCAATGAGGTGACAGGTACCCTACGGATCAAGGGCTACTTTGACCAGGAGCTTAAAGCCTGGCTCTTGGAGAAAGGCTTCTGAGGCCCAGCCGAGCAGCCTGCTTGTCAGCATGCCCTGTGGATCAAGTCTAGGGGGCCTCAGGAGGAGGGAGGTGGGTGTTGGAGCCCCTGAGACAGGGGATACAGAAACTAGGGCTAAAGGACTTTGGGGTCAGGCCTTGCTTGCATAAAGGAGAAAACAACTCTATGTACATGCTGGGGGAGAGTGCCTAATGTGGGAGACCAAATAGGGATCACCAGGCTAATGGGGGGCGTCAGCAGCTTTCTCTCCCTCCTATCTTGGCCTGttcttttttgttttttgagacggagtctcactctgttgcccagggtggagtgcagtggcatgatcttggctcactgcaacttccacctctgggatcaagggattctcctgcctcagcctcttgagtagctgggattacaggcgcccaccaccacagcctgctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactcctgactcgaagtgatccgcccaccttggcctcccaaagcgttgggattataggcatgagccatgtgcctggtcCACCTTGGCCTGTTTTGTTTTTCTTTCCTTGGGCTCAGCAATTCAAATTCTAGTTGTTATTTGGTGGAAGCAGTAGCCCAACCCCAGTTTAGGGGAAGGTAGCACAGGGCAGAGCCACTGGGCACTTTGTTTCCTTGGCCCTCCGAAGCTCACTGTTGCAAATACCCCCAAGCCTTTGCTCTAGGCCAGATCTTGTTTGGTGCAGGTGATGGAGAACACAGATGACTCGGGCATGGGTCTTGGAGATCTTCTGTTCAAAGTACAGTGCTGGCACTGGGGCACAGAGTGCCCACGTTAGCCCCGGGCTCTGATAGAGAGGTAGGAGGCACGTTCTTGGTCACTGTTCCATTGCAGACCAGACTTGCTGGCCTGACCACAAGGGAGTGGCTGGGAACTCACAGCCAGCATAGGGACATCCCCCTGCAGCCTTCTGACCTGCAATCAAGGCTGGGGAGGGGTTTGCAGGCAGGAATATGCTGACCTTTCACCCTGCCATCCCATCCCAACCCCAGCTCACTAGCCTTCATATATGCCTTATACTTGGAGTCACAGGGGCCAAAGGCCTGAGACCCCACCCTGCCCCCAAACTGGCTAAGACAGCTttcagttcctgactccccaacttggtctctgccctgaagcagggcactgaactctgggctgcttctctgtgtgtaaaatgggcacaTCTTCCTAATCTGTTAATGGTCAGTGGTGTCCCCAAGGATAGTGCTGGCTTCCATGGAAACCCTCACTCCTGGAGATTCCATTCCATTTTCAAGTGTACAGCCACAGCAAGGAGCCCGACACTGATTTGATCGATTCTGTGACACAAACCCCACCAATTGTTAATGCAAGTTTTTATTTGGCTGTATATACAATTTAAGCTATTAAAATTTGTACAATATTTACAAATTAAATAATCATCTGAAACTGTC