Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Cyld
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name CYLD lysine 63 deubiquitinase
Also known as 2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849
Coordinate chr8:89423506-89478574
Strand +
Gene summary This gene encodes a protein that is a member of the ubiquitin C-terminal hydrolase subfamily of the deubiquitinating enzyme family. Members of this family catalyze the removal of ubiquitin from a substrate or another ubiquitin molecule and thereby play important roles in regulating signaling pathways, recycling ubiquitin and regulating protein stability. This protein removes ubiquitin from K-63-linked ubiquitin chains from proteins involved in NF-kappaB signaling and thus acts as a negative regulator of this pathway. In humans mutations in this gene have been associated with cylindromatosis, an autosomal dominant predisposition to tumors of skin appendages. In mouse deficiency of this gene impairs thymocyte development and increases susceptibility to skin and colon tumors. A pseudogene of this gene has been identified on chromosome 1. Alternative splicing results in multiple transcript variants that encode different protein isoforms. [provided by RefSeq, Jan 2013]

Retrocopy(s) from Cyld

Retroname Coord Strand Genomic Region ENSG
CyldP1 chr1:108697863-108700511 + Intergenic
ENSMUSG00000101097 UCSC

Expression

Transcript Sequences

>NM_001276279.1
AGTTCGGAGGCGGGGCAGGTGGGGGCGGGCCCAGGTAGCAGGTTCGGCTGCGCGGGGGCCCGCGCGCCTGAGTGAGCTCCTATGTCATGGATTCTGAACTGGCTTATAATATCTGGCATGGATTCCTTTTAGCAGAGCAGGCCTCAAATCCGATAGAGCATGGTTGCTTGATCCCATTGCAGCCCTGCCACTAGTGGCTCCTGGCACTTTGAATTGCTGTCTTTTTACAACATGGATGCCAGGTTGCTAAAATCTTGCTTTGGGACTTACAGCGAGTTCATTTTTTTGGATTTTATGACAGATTTACTAGTGGCTCCTTTTTGCCAGTCAATGTTCTGAAAGTTACTGTCACAATGAGTTCAGGCCTGTGGAGCCAAGAGAAAGTTACTTCACCCTACTGGGAAGAACGGATTTTTTATCTGCTTCTTCAAGAATGCAGTGTAACAGACAAACAAACTCAGAAGCTGCTGAAAGTACCCAAAGGGAGTATAGGACAGTACATCCAAGACCGTTCTGTGGGGCATTCAAGAGTTCCTTCCACAAAAGGCAAGAAAAATCAGATTGGATTAAAAATCTTGGAGCAACCGCATGCAGTTCTGTTTGTTGATGAAAAGGATGTtgtagaaataaatgaaaaattcacAGAGTTACTGTTGGCAATTACCAACTGTGAGGAGAGGCTCAGCCTATTTAGAAACAGACTCCGACTAAGTAAAGGCCTCCAGGTAGACGTGGGCAGTCCTGTGAAAGTACAGCTGCGATCTGGGGAAGAGAAATTTCCAGGAGTTGTACGCTTCAGAGGACCTTTATTAGCGGAGAGGACGGTGTCGGGGATTTTCTTTGGAGTAGAATTATTGGAAGAAGGTCGTGGTCAAGGTTTCACGGATGGGGTATATCAAGGGAAGcagcttttccagtgtgatgagGACTGTGGCGTGTTTGTTGCATTGGACAAACTAGAACTTATAGAAGATGATGACAATGGATTGGAAAGTGATTTTGCAGGCCCAGGAGATACAATGCAGGTTGAACCTCCCCCTTTGGAAATAAACTCCAGAGTTTCTTTGAAGGTTGGAGAAAGTACAGAATCTGGAACAGTAATATTCTGTGATGTTTTACCAGGAAAAGAGAGTCTAGGATATTTTGTTGGTGTGGACATGGATAACCCTATTGGCAACTGGGATGGAAGGTTTGATGGAGTACAGCTCTGTAGTTTTGCAAGTGTTGAAAGTACAATTCTCCTGCACATCAATGACATCATCCCAGATAGCGTGACACAGGAAAGGAGGCCTCCCAAACTTGCCTTTATGTCAAGAGGTGTAGGTGACAAAGGTTCATCTAGTCATAATAAACCAAAGGTTACAGGATCTACCTCAGACCCTGGAAGTAGAAACAGATCTGAATTATTTTATACCTTAAATGGGTCATCTGTTGACTCACAACAATCCAAGTCCAAAAATCCATGGTACATTGATGAAGCATTTGGGGGCTATTTAAGTGAAGTAGTAGAAGAAAATACTCCACctaaaatggaaaaggaaggttTAGAGATAATGattggaaagaagaaaggcatcCAGGGCCATTACAATTCTTGTTACTTAGACTCAACTTTATTCTGctTATTTGCTTTTAGTTCTGCCCTGGACACTGTGTTACTTAGACCCAAAGAGAAGAATGATATAGAGTATTACAGTGAGACTCAGGAGCTACTGAGGACAGAGATAGTCAATCCTCTGAGAATatatggatatgtgtgtgccaCAAAGATTATGAAACTGAGGAAAATACTTGAAAAAGTTGAGGCTGCATCAGGTTTTACCTCTGAAGAAAAAGaTCCTGAAGAATTCTTAAATATCCTGTTTCATGATATTTTAAGGGTTGAACCATTGTTAAAAATAAGATCAGCAGGTCAAAAAGTTCAAGACTGTAACTTCTATCaaatttttatggaaaaaaatgagaaagttgGAGTACCCACAATTCAGCAGTTATTAGAATGGTCTTTTATCAACAGCAACCTGAAATTTGCAGAGgcACCATCATGCTTGATTATCCAGATGCCTCGGTTTGGAAAAGActttaaactatttaaaaaaatttttcctTCCCTGGAATTAAATATAACAGATTTACTTGAAGACACTCCCAGGCAGTGCCGCATCTGTGGAGGACTTGCGATGTACGAGTGCAGGGAGTGCTATGACGATCCGGACATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGACCTGCAGCACTCAGGTTCACCTTCATCCCAGGAGGTTGAATCATTCTTATCATCCAGTATCACTTCCCAAAGACTTGCCTGACTGGGACTGGAGACACGGCTGCATCCCCTGTCAGAAGATGGAGTTATTTGCTGTTCTCTGCATAGAAACGAGCCACTATGTTGCTTTTGTGAAGTATGGGAAGGATGACTCTGCCTGGCTTTTCTTTGACAGCATGGCGGATCGAGATGGTGGTCAGAATGGCTTCAACATTCCACAAGTGACGCCCTGCCCAGAAGTGGGAGAGTACTTGAAGATGTCTCTGGAGGACCTGCACTCTTTGGATTCCAGAAGGATTCAAGGCTGTGCGCGCAGACTTCTTTGcgatgcatacatgtgcatgtaccaGAGTCCAACCATGAGCCTGTACAAATAACCAGGTTATCCGCAGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTTCAGCAAAGGATTCCTGTGTTTCCAAACAAATTGCTTTTGTGTTCCTGAAGTATTTAATAAGAAGCATTTTGCACTCTAGGAAGTATGTTTGTGTTGATTTTTTAAGAAGTCTAAATGGATTTATTAATATCTGACACTTTAAGTTAACTGCATTGATGATACGATATTTTTGGAAGCATACAATTTTAATTGTGACGTCTAAAACCTCTTTTAGTCCATTgaggatgtaaataaatatttcttcttaTGGACCAGGGATATGAAATCATTTTCCTTTTGTAGCTAATGATTGCCTTGAGAAAGACATAATATGATTTTATTAAGAGTCTGCCTTTACTCCAATTGTTGAAGGTGTGCTGAGTTTAATTGTTAATTTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGTTCCTGCAGCAGTGGTCAGAACATGCTGAAATTCCTTTCATggtgttattttttatttgttctagTTTTGAGATAAATGAGTGACTCTGTCATAAAATGTCcatttttgatttgttcttgaagAATTAGGGTACAAAACAAGTATCGTAGTCATAGTAACAACTGTTACTGAACAGGTCTTCTGTAGGGGCTCCTAAGTATGAGACAACATGCAGTGGTTTCTGAAATGACTGAGCGATAAGtaaattatatattctttttttaaaagatttattttatttatatgagtacactgtagctgtcttcagacacaccagaagagggcatcagatcttattacagatggttgtgagccaccatgtggttgctgggaattgaactcaggacctttggaagggcagtcagtgctcttaactgctgagctatctctctagccccaaattatatattcttatacAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAACATTTCCCTGAAAAAATGTGTTAGGTGTTTAAAAATCTCAtcgtaaataaattattttatttttagtttaagtGAATTTCTCTTAATTTAAATAAGACTAATATTTTTGTTTGACTGAAGACCCTTGTACTCTCTGGTGTCAGTTTGGTGTCACTTGAAACAATGACAACCACGTCAGCATGTTACTGCAATGTCAGTGATGGtttcaaaggagaaaatggaTGTCATCTTAGGACtgcttgtgtgtgtatagacCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGGTATGGCTGTCTCTCTGAATAATGTCAACCTTACAGAAAGAGAAGGTGTTATATGTGTAACATATGGCTTTATAAAAGATTTAATGTCAAAAGAGTCTATAAATATTGCTGTTATTTTTAAAGGCACTTTACTCCTTGGTTTTATTATTCCATTTTGCTGGCGTGTATTAGCTTTATATAAATCACAACACACAAAACTCGTCCATCTTGTAATCTTTGTACTTTTGCAATGGAAAAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGGAGAGGCCATGAGTAGATAGCAGTAAAGTCCTCCAGCTATAGGCTAGCCTTGTCTTCATCATCCTGGGACAGGTGAGAACGGTGAGCACAGGTGAGTCTGAGCTTGCACACTGACCAGAATTCAGTCACCCTGTAATAAGTATGTATTTAATGAGTCTGTTAGTGTGGTAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGCAAGCCTGGCTTAACAGTGAAGGGGAGGGGGCTGagggaaagctttttttttttttaatttcagaaatgGAAGCAAAATCCATGTGCAAAGAGACTAGCTACTTGGCTTTCAGAGCAGAGGACTCAAAGCTTGTTTGCAGTGGTTCTGAAGTTGGGGTGGCACTTTGTGAGTGAGGAGGACCATGTCCACAGGCAATCCCTAAGCAAGATCGTCTCGAAATTGCACTGTGTTCTTTAGCAGTAGTGGCTGGGTAGGGGCACACAGCGGAACACCCACTTGCAGTGGCTGGGGAGGCCTGAGAAGCACAGGCCAGCGGGAGCTCTCTCCCATGCCTTCTTGTCCCTCTGGACAGCCCCTCCTCATTCCTTGTCCCAGCAGAGCCTGGTTTGCCCCTGGGGCAATAGGGTTGGACTGTGTGGTGCAGATAGCCCTCGTGCCTGTGGATTACTTTAATTTTGTAATCTTAGGTTTTCTGTACGGTTTTCCCattgccttttaaaatattttgagtgtCCTTCTCCTTATcaagatggtagtgtagtaggATTGTTTTACTCACAACATGGTTTAGGAGCCATAGCTACAAATAGGAAATATAAGAATTCTATTTCTCTACTGTGAGGCaaatctgtatatatgtatggagaGTCAGGAGGATGAacaagggagaggaaaggggccCAGGCACATTTTTAATCCAAAAGCTACAAAGTGTCGAGCTCCTCAGGGCCAGCTTCACAGAGAGTCCAGCTCAGTTCACAAAGTATTTTCTAAGTTGGGGAAATGCATTGAGAAACAGAGCGAGATATCTGTGTAGTGCAGCTGTGGGTGGTTGCTATGCATTTTATCCTCAGAGTAGCCtggggtttttattttatgtttgccaAGTGCTTAGGTAAATGGCCGGGCTCCTCTTACCTCTGACTTCTGGAGCGTGTCCATTCTCTGGTTGACTGAATGTGGCATTTTCATAAATCTAGGAGCAGCAGCCCTCCCAACTGCAATTTAGTAAGCAGGTAGATAAGCTTGCATCTGTTTGCATCTTCCTGCACTGAGTTGGGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATGGGTCATTTGCTAGGTGGCTAGCATACGGCACGGGGCTAATGAGACCTGGGGCCTGCTCTCATATAGCTTACTGCTCAGTTTCTATACCAGAGCATCCGTTGGTGCTTCTTAGCCTAGGCATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTTATTGCAAAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCTGAATGAACACCACCTCGATttcttgagtttcagtgtctTGTTCTGTCTGATGAAAGGGTTGGATATGTAGTTGGATAAGCGGTACAAATTGTTAGGGTTCCAGGCCATGCCTGATACATCTGAGTTTTTGCTGGAGGTAGGAAATTTCAACTCAGAAGCTCATCCACAGAAAACAGTGACCAGCAGCAGGTATGGAGCCATAAGGCTGGAAGGCTTCAAAGACCCCTTCTTCTGTTACTGTTATCCACGGCAGTTATTCTGTGTAGGTGTGAAGGAGTGGCTACTGACTCTGTGTGGATCAGCGTTTACATATGACCTGATGGGAGTGCATCTGGTATGTGTTCCTCCCCCCTGTATTGCTGGAGAGATTGGCAATCGTAGGTATACACGGAAGTGTCGGGATGTTCAGTGGCGCGCACTTGGATGTTTCTTTTCACTTTATTTCTATAGAAACAGGTTCCAGGAGCCAGAGAAGTAGGGGAAAAAATCCCTGAGCTCATCTCTCTCTACTACTTAATAATGCAAACATTTAAATTCTTGGGAAGATTTTCCCGCCCCACTCCCTACCCCCAGTCACAGGTCAGAATAGGATTTCCTTCTTAGAGAAGGTAGGTCATGGGGCCTgcgattaaaaaaacaaaaacataaaacaaacaaacaaacaaggtggcTTTCCTTGGTCTTTGTGATTCCAGCTCTTCACCAGTGAAGGAATTCTTTAGTTCCATAGTGCAGCCTGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGgttggaggaggcagaggacaggGCTCAGGGAAGGCAAGCCTGTGGCTCTGGGCATTGGCCCTCTTGTCAAAGGTGTCAGAGCATGGCTTCCTGTGAGGGGCTTTCCCTTGCTCCTGTGTGAGAATCTGTGCGTTGTCTTACTGGATGGGGGACCTGGATGGAGATGTTAGGGGAGATAGCTTAGTCTTGTTCTAAACTCTAGACTTGCTAAAAAGGGTTCTCTTGAGTCCAAATGCAGTGCCAGAGGGTGAGAAGCAGAATTGGCCAGTAGTGAACAGTGGTATTGTGGGTGATAAGCCCTTTCTGGTGGCCTTAAATAGCAGTGCTAGTCCTTGAGTGCCACAGGGTCCCCTACCTCCGTCCTGGCAGTGCTGATGGGTTTGTTTCAGCATATTTTGGTTCTCATTCTCATTTAGGGAAAAGGGCTGTTGATGAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTTAAACACTGTTGACTTTCATTAGTTATTCTAAAGGGATTTATATTGGAGATACAACTCCCTTTGGTTTCATATTATGAAATAGCTTTGTACTGTGGAATGCTAACTCTGGAAAGTCTCCCTCATACCAGAACCaaacattcatttcttttatatatatatatatattatctccCTGGTACTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTTCTAGTTCCTTTTCTGGTACCTTGTTCAACATTCTTTTTTCCTGAAGAACATCCTTTTGTTTATGAAAACGTGAATAGCATCATGTAAAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAAAGTGCAGTTTTTATGCTTCT