Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name VLDLR
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name very low density lipoprotein receptor
Also known as CAMRQ1|CARMQ1|CHRMQ1|VLDL-R|VLDLRCH
Coordinate chr9:2621787-2660056
Strand +
Gene summary The low density lipoprotein receptor (LDLR) gene family consists of cell surface proteins involved in receptor-mediated endocytosis of specific ligands. This gene encodes a lipoprotein receptor that is a member of the LDLR family and plays important roles in VLDL-triglyceride metabolism and the reelin signaling pathway. Mutations in this gene cause VLDLR-associated cerebellar hypoplasia. Alternative splicing generates multiple transcript variants encoding distinct isoforms for this gene. [provided by RefSeq, Aug 2009]

Retrocopy(s) from VLDLR

Retroname Coord Strand Genomic Region ENSG
VLDLRP1 chr4:184072421-184073044 + Intergenic
ENSG00000250726 UCSC

Expression

Transcript Sequences

>NM_001018056.3
ACCCCGCTCTCCGGCCGCCGCCGGTGCGGGTGCTCCGCTACCGGCTCctctccgttctgtgctctcttctgctctcggctccccaccccctctcccttccctcctctccccttgcctcccctcctctGCAGCGCCTGCATTATTTTCTGCCCGCAGGCTCGGCTTGCACTGCTGCTGCAGCCCGGGGAGGTGGCTGGGTGGGTGGGGAGGAGACTGTGCAAGTTGTAGGGGAGGGGGTGCcctcttcttccccgctcccttcccccgccaactccttcccctccttctccccctttcccctccccgcccccaccttcttcctccttTCGGAAGGACTGGTAACTTGTCGTGCGGAGCGAAcggcggcggcggcggcggcggcggcACCATCCAGGCGGGCACCATGGGCACGTCCGCGCTCTGGGCGCTCTGGCTGCTGCTCGCGCTGTGCTGGGCGCCCCGGGAGAGCGGCGCCACCGGAACCGGGAGAAAAGCCAAATGTGAACCCTCCCAATTCCAGTGCACAAATGGTCGCTGTATTACGCTGTTGTGGAAATGTGATGGGGATGAAGACTGTGTTGACGGCAGTGATGAAAAGAACTGTGTAAAGAAGACGTGTGCTGAATCTGACTTCGTGTGCAACAATGGCCAGTGTGTTCCCAGCCGATGGAAGTGTGATGGAGATCCTGACTGCGAAGATGGTTCAGATGAAAGCCCAGAACAGTGCCATATGAGAACATGCCGCATACATGAAATCAGCTGTGGCGCCCATTCTACTCAGTGTATCCCAGTGTCCTGGAGATGTGATGGTGAAAATGATTGTGACAGTGGAGAAGATGAAGAAAACTGTGGCAATATAACATGTAGTCCCGACGAGTTCACCTGCTCCAGTGGCCGCTGCATCTCCAGGAACTTTGTATGCAATGGCCAGGATGACTGCAGCGATGGCAGTGATGAGCTGGACTGTGCCCCGCCAACCTGTGGCGCCCATGAGTTCCAGTGCAGCACCTCCTCCTGCATCCCCATCAGCTGGGTATGCGACGATGATGCAGACTGCTCCGACCAATCTGATGAGTCCCTGGAGCAGTGTGGCCGTCAGCCAGTCATACACACCAAGTGTCCAGCCAGCGAAATCCAGTGCGGCTCTGGCGAGTGCATCCATAAGAAGTGGCGATGTGATGGGGACCCTGACTGCAAGGATGGCAGTGATGAGGTCAACTGTCCCTCTCGAACTTGCCGACCTGACCAATTTGAATGTGAGGATGGCAGCTGCATCCATGGCAGCAGGCAGTGTAATGGTATCCGAGACTGTGTCGATGGTTCCGATGAAGTCAACTGCAAAAATGTCAATCAGTGCTTGGGCCCTGGAAAATTCAAGTGCAGAAGTGGAGAATGCATAGATATCAGCAAAGTATGTAACCAGGAGCAGGACTGCAGGGACTGGAGTGATGAGCCCCTGAAAGAGTGTCATATAAACGAATGCTTGGTAAATAATGGTGGATGTTCTCATATCTGCAAAGACCTAGTTATAGGCTACGAGTGTGACTGTGCAGCTGGGTTTGAACTGATAGATAGGAAAACCTGTGGAGATATTGATGAATGCCAAAATCCAGGAATCTGCAGTCAAATTTGTATCAACTTAAAAGGCGGTTACAAGTGTGAATGTAGTCGTGGCTATCAAATGGATCTTGCTACTGGCGTGTGCAAGGCAGTAGGCAAAGAGCCAAGTCTGATCTTCACTAATCGAAGAGACATCAGGAAGATTGGCTTAGAGAGGAAAGAATATATCCAACTAGTTGAACAGCTAAGAAACACTGTGGCTCTCGATGCTGACATTGCTGCCCAGAAACTATTCTGGGCCGATCTAAGCCAAAAGGCTATCTTCAGTGCCTCAATTGATGACAAGGTTGGTAGACATGTTAAAATGATCGACAATGTCTATAATCCTGCAGCCATTGCTGTTGATTGGGTGTACAAGACCATCTACTGGACTGATGCGGCTTCTAAGACTATTTCAGTAGCTACCCTAGATGGAACCAAGAGGAAGTTCCTGTTTAACTCTGACTTGCGAGAGCCTGCCTCCATAGCTGTGGACCCACTGTCTGGCTTTGTTTACTGGTCAGACTGGGGTGAACCAGCTAAAATAGAAAAAGCAGGAATGAATGGATTCGATAGACGTCCACTGGTGACAGCGGATATCCAGTGGCCTAACGGAATTACACTTGACCTTATAAAAAGTCGCCTCTATTGGCTTGATTCTAAGTTGCACATGTTATCCAGCGTGGACTTGAATGGCCAAGATCGTAGGATAGTACTAAAGTCTCTGGAGTTCCTAGCTCATCCTCTTGCACTAACAATATTTGAGGATCGTGTCTACTGGATAGATGGGGAAAATGAAGCAGTCTATGGTGCCAATAAATTCACTGGATCAGAGCTAGCCACTCTAGTCAACAACCTGAATGATGCCCAAGACATCATTGTCTATCATGAACTTGTACAGCCATCAGGTAAAAATTGGTGTGAAGAAGACATGGAGAATGGAGGATGTGAATACCTATGCCTGCCAGCACCACAGATTAATGATCACTCTCCAAAATATACCTGTTCCTGTCCCAGTGGGTACAATGTAGAGGAAAATGGCCGAGACTGTCAAAGGATCAATGTGACCACAGCAGTATCAGAGGTCAGTGTTCCCCCAAAAGGGACTTCTGCCGCATGGGCCATTCTTCCTCTCTTGCTCTTAGTGATGGCAGCAGTAGGTGGCTACTTGATGTGGCGGAATTGGCAACACAAGAACATGAAAAGCATGAACTTTGACAATCCTGTGTACTTGAAAACCACTGAAGAGGACCTCTCCATAGACATTGGTAGACACAGTGCTTCTGTTGGACACACGTACCCAGCAATATCAGTTGTAAGCACAGATGATGATCTAGCTTGACTTCTGTGACAAATGTTGACCTTTGAGGTCTAAACAAATAATACCCCCGTCGGAATGGTAACCGAGCCAGCAGCTGAAGTCTCTTTTTCTTCCTCTCGGCTGGAAGAACATCAAGATACCTTTGCGTGGATCAAGCTTGTGTACTTGACCGTTTTTATATTACTTTTGTAAATATTCTTGTCCACATTCTACTTCAGCTTTGGATGTGGTTACCGAGTATCTGTAACCCTTGAATTTCTAGACAGTATTGCCACCTCTGGCCAAATATGCACTTTCCCTAGAAAGCCATATTCCAGCAGTGAAACTTGTGCTATAGTGTATACCACCTGTACATACATTGTATAGGCCATCTGTAAATATCCCAGAGAACAATCACTATTCTTAAGCACTTTGAAAATATTTCTATGTAAATTATTGTAAACTTTTTCAATGGTTGGGACAATGGCAATAGGACAAAACGGGTTACTAAGATGAAATTGCCAAAAAAATTTATAAACTAATTTTGTACGTATGAATGATATCTTTGACCTCAATGGAGGTTTGCAAAGACTGAGTGTTCAAACTACTGTACATTTTTTTTCAAGTGCTAAAAAATTAAACCAAGCAGCTTAACCATGGTTTGTGCCTGTTCCTCTAGGATGAACTCCTATCCTGAGTAGTACCAAGTGTTCTAACTAAATGTGTGAGCTGTAGTTCTTGATGTTGTATAACTAAGCCTGTAATTGGGCTGGTTTCTCTTACACCCTAGCACAGTTAAAAAATGAAGTACTGTTTAACATTTGCTCCCGAAATATTTCTTACTGTGTAAAAGAAGCTAGCTTAGTCTGTACCTAGAATTCCTCTTGGTTAGAGGAGTGAGTTTCTTTTTTTTCCATTAACTTGTTTCCTGATCGAGAAACACGTGCTAAGATTTCTATGAATTCTGCTTCTTTATAGTTAAGTCTCTGTTTTCCATGTTCTGTCATTTATATAGGTCAAGGACAAGTGCCTTCTAAGGCATGGATAAGGGCTTTCTTCTTATGAAAGTCTAGACTGTCTTACTGTGAAGATGGCCAGGGAGGATAGCAAGCAATGGCATTCTTGAACAGTCTAAGGCAGGTttctcagtgtggtcctgagaacagaagcatctgcatcacctgggaatgtattagaaatgcaagttcccagccccatcccagacctactgaatcagaaactctgggggcgagggctgaaacctgctttcataagcccttcaggcgatactgatgtaaactaaagcttaaaaaccaccgTTTTACTGTGACTTCATGAAGAATATAATTGCAATATCACCTAAATTTTTATCCTGGCTGGGATGGGGCAGATTCTTACTATGGACAATTTCTGGAACTTACAGTATGAAGAGCAGATGAGGAGTTTGAGACAAAGAAAAAATTGTACAGGGAGTTTAGTGAATTTTCCATCAGGTTGGCCATTACTTTCTTTCTCTAAAGTCTCAGGATGTCTGGAAGCAAGGAAAGACAAAAGACTTGAAGCACCGGGTGCATGCTGTGTGTCACAAGTGAGGTGGAGAGTTGGCTGTGGAAGGTACAGCAATTCCTCTGGAATTAAATGACCGACCAACACAGTACCAAGAGGATGAAGAGAAGATGTTTTGCGTTGCTACGTGAATCAGTGGATGACTCATATTTCACTTGCATATGAAATATAAGGCAGTTAACATCTTGTTTGTGGCTTAAGCAAGGACATTAATCCTACTAGATGAAGGGGAAGTTGGTTCTGTTGTCTTAAGGGATGCCCCCTTGTGATTTTGGTCAACTGAATGAAAAAGAAAAGATAGCCTTGGACTTTTTTTTCATGGGAGGTTTGGAGGTCAAGCATGTAGAAGGAAAAGGCTGTAGTCATGAATATAGAACTGTCTGCTCTCCACCTTTTCCTCACTCTACATTTAGTCATCACACTGAACAGGATGTGGCCTGCTGACAGTGAGTAGCTGAAGTGCCTGTTTGGTAAGTAGGTTAGCATTCATCATGAACTCTGAAAGCCATTTCAGAGTTTGGCTGCTGCTCTGACCCTGCTGTGGTACAAAAAACATGGATTTTTTTTTTTTTAACTGGAGTAATACCAAATTCCCTTTAGAAGCTTGAAGTTTGATACTATTGCTTTCCCCATTATAAGGATTATACAGTATTAATTAATTATAAGGCCCAAAGTTTGTTTTGGCAAATAAAGTATTATTCTCTATCATCATCTTTTGAATTCCTGTCCCTAGTATGTTCTTTCATGTTCTGGGTAAAATTTCCAACCCTCAAAGAGTCTAAAACGTCTCATTTTTTTTTACCACGTCCTCCCCAGTAAGAAGCCAAGGTACAACTCATTGTACCTACGAGGTACAAACTCATTTGTAGAAACAAAGTAACTAGATATTCCTATTGAAATAAGAATAGATATATTGGTGggccaggcatggtggctcacgcctataatcccagcactttggaaggccaaggcaggaggatcacttgaggccaggagttcgagaccagcctgagcaacatggtgagaccctgtctctacaaaaaaaaaattTATAAAAATAAAAGAAAAAAATAGTTATATGACTAAACTACTAGTCAATACAGCTTGCAATAATAGTGCATGAATGATAACAGGCCTCGGCTTTATCACCCAAAAAATAACTTGAATTCTATGTGAAATGTGTTAGGATAAGTTTGCTCTGTCTCTAGAGTTCAATGTAGAAGATAATTAAGAGGTAAAATATGAAGCTTATCATACACTAAAGGAGAATATTTGGAGTTAGATGAGCCTGTCACACAAAGTGAAAGTGGACCCTCCAGAAATTTTAGGAATTGCCACAAAGATTGATGATAGATGAATAAACAGATTTGTGGCCTCTGGTAAAGAAATCCAGCCAAGTTCCTCTGTCCAAATTTTTAAGTGCCCTTTGCAAGCTAATCTATTTGGCAAAAAAATAGTCCCAGTTGTTCAACTAGCTCCCTTAAAACATTCTAGTAGGTGTTTTAAAGCCTAGGTATCGCTGCCTCTTTAGTTCTTGATGAATACAAGGCaaaaaaaaaaaaaaaaaaaaaaaaaaaaTTGAGGCTTTCACTTTGGCATTTGCTTCTGTTCCTTGTATCTGTGGAAGTCAAGTAGCCCTTCTCAAAAATGAGAAGCCAAGCTTTAAATAGCAAACTACAGGGTATTAAAAGACTAACTCTTCAGTTAAGAACACTGTAGAAATGGTAGACCAACTTAAAGTCTACCTTTTAACAATCTTTACCCCAAACCTAAAGATTCTAGGGGTCACTTATCTCTATTACGTAATCTAACTGGAATAATTTCCTAGAATTCTTACTAGTGAAATCTTACCCAAGTAAAACAATTTATTATTTTGAATCCAAATGAAAGCTATACTGTTTGCTTTCAATGGTGGCAAAAACTTGCAAAAAGCAGATATACTTTTGCTAATTTAAGTTGAAGTACTATGAATACAACCTGCTAATCTTGATCCCCAAATCTGAGCCCTTCAGTTTCATAATTGTTTTATCCTGAACGTAGTTGTGACATAGACATTTCTCAAAAGGGTCTGATACATCAAACTCCTAACAAGTAGGAGCAGCAACTAGCTAAAGAGTAGAAAGAAGCTTCCCTTATTGTGGGTGATGAGGCGGTGCCTAAAAACCACATATATATAATCCCCTGGGTATTACATATTCTGCAAGCCCTGTTAGTGGGGAGATGGTAGTGGCAATAGCAGCGATAGTTGCGTCAGTGCTAACTGCTGCTGCTGCCCGTTCTGTTGGCGGCTGCTGGCCAAGTGTGCACACTTAGCCCTGGTTGAGGTGCATTGTCTGCTGTCGTCTGTTAAGCATCTAACCGGAGTGGGAGGGCACATCAAGCGATTTCACTCTCTTAAAGAAAAGGTTTTTAGGTATTTTTGGTATTATATAGTCTCTAAGGCCAGAAGGGGCTTATAATGACTTCTCTTCTAGAATTGTAATACTAAAAAACTACTCGAGTAAATATCCTAACAAGTATGATTTTTCTTGGGAAAACTAAAAATTGTACATCCATGCTTCAGCCATATCATGGGCCTAAACTATGAGAGTTCAGAAATATATAAAAGTACAAAAATCTTCAAAGGTACTTATTTCCAAATATGGAGGGAATGAATCTGAAGAGGGAACAATGGCGTTTTTCGAACTTATTTCTCTCTAATCCAGCCTGGAGGATTTTTAGCCGAAACAGTTGCATGTGAAGGATTATCAGCCATCTTTGCATATCCCTTTCACATCTACCTTCACACAGGAAAGCTGAATGCATTTTACCAGTGAGGCTCTAGATATGAAACTTAGGGATCCATAGATAAATAAGCTACTAACAAACTGATAACAGTGGTGTTCCATCTCTCTATCATGTCTCCTGAGTCCGTTTCACGTTTTTGAGCCTGGCTAATGAGAAAAAGAACAAAGTAGGACCATGACCCAGTGTTCTCCTGTAAATCTCACTGTAAAAATCTCAATGCAAAAACACTGAGACAGGAGTGAGACCAGCTGCGGGTGGGGAGTTTGTGCTCCGCAGGTTACCTCATGGCATATCAAAAATGGCTTTTTTCTTCACTGCGCTCAAGGAAAAAGTCAGATGGGTGACAAGGTGGTTCTGTTTAGAAGCAGCAGGCAATGTAGTTAACAGCATAGACTTCCGTGTCTTGtgtgtggtaccttgggcaagttactaactccctctgtaaagtagagacgatggggactgtctcactgtgacaaggtaagatttaagtgagatgcacacaaaaagctcagcacagtgtctggcatctaatatgtgcAGGGCAGATGTCACTACTGAATATCACATCAATGCTAGGGCTGTATTTACTGTCACACACAGGCACCGGTAAGTGACTTTACCGGTGAAAGTCACAGGTACCTTTATCTATGATGAATGTAATGTGTTAGATGGTGACCGAAGTGTTCTCCACTACACCTGTCTGAAGAGATCTAAGTCTGATATTTAAGGAGTGATAGCATCTTGCATACTTAAGAAGGCTTAAAAGACTGCATGGTTTAAACCCTAGAAACATAAATGGAATGTTTCTGCCTCAGTTCTTTTGACTACCTCCTAGGACATGGAAACAAATATTTGGGAGCCTGCATAGTCTTTAGATGGCTGCCAAAGCACTTAAAATCTCCTttaaattcttaccatatgcttacttttgtactaagtaagtgctcccaagtcttttacttgctcttcacagcaaccctaataggtatctccattttacataggtaaaaactgaggctacaaaCAATCTATGGTTCCAAATCCTATGTGCTTACTGCCGTCTTCTCTTAGAAGGGGATGCAGTACTGTACAAAGATTGAGCTGGATGTCGCATTGCATGTTTGCTGAGTCCTCCTCATTGCTGATGTTAGGATCCTTCAACAGTTTCTCAGATGCCAGCTATGGCTGGCATCCAGTATGGTGGTGTAATGGAAGTGTACTACTAGCACTACTACATCAGGTCAGCACAGATTAACTCAGTTACGTGTTATACCTTCAAGACGCTAGACATTCCAGAATTATTTTCCTTGGCCATCCAAGTGAAGTAGAAGTAGATTGTTGGATTGCAAAGAAAATGATAAAGATTCCCTAAAGGAATTTATAAGCAGGCAACTTCATTCCTATGTATAAGATATTGGGAGAAAACAAACTGTACCACAACAAATCTTAAGTTTCAAGGCTCTCCTATAGGGAGAAACATGGCCAAAAAGACAGGAAGAACTGTGGCTTGTAACTCAATGATGCTATAACTCCAGCACTGGATCTTAAGTATTCTGGAATATACCAGATTGGTAGAACTACCAGACTTGGGTATTTCTCAGTTAACACACATGCAAGGAGGAAGAGAGTTTTTTTGAACAAAATGACTGGCTTTGACAAAACTATCTTGCTCTTTTTAAATGTCACTTGATACTAGAATGCGATTTAAAAGCATGTAATGCCTCAGGAGTCCGGCATATACAACCAAATTATCATGCTCAGGATCTTCAGAATTCTAAAGGCACATGTTAGAATGCAGAGTCCTGATGACCTGTCAATAAACTTTTTTTTACTAATGAACTGTACATTTAAATAAAAGTTTATTTTTGGGATAA