Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Taf1d
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name TATA-box binding protein associated factor, RNA polymerase I, D
Also known as 2810003M17Rik|4930553M18Rik|5930426I11Rik|Josd3|TAF(I)41|TAFI41
Coordinate chr9:15217485-15228274
Strand +
Gene summary Predicted to enable identical protein binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be located in cytosol; microtubule cytoskeleton; and nucleolus. Predicted to be part of RNA polymerase transcription factor SL1 complex. Predicted to be active in nucleoplasm. Is expressed in several structures, including alimentary system; brain; genitourinary system; integumental system; and sensory organ. Orthologous to human TAF1D (TATA-box binding protein associated factor, RNA polymerase I subunit D). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Taf1d

Retroname Coord Strand Genomic Region ENSG
Taf1dP1 chr2:50411817-50413047 - Intergenic
 ENSMUSG00000083449 UCSC

Expression

Transcript Sequences

>NM_027261.3
GCGAGATTTCGTCCTTGTCCTAGTCCGGCTGCTGGGCGCCGGGAGCGCTCTTTTCGACGCGGCGGAAGAGAAAATTGGGAAAGGCCGCGAAAAGTGATGGCTCAATCAGAAGTGAATTCTGTCTGTGTGGCATCGGATAGAGCTGGAGATACTGGAGACCAAAGtgATGACTCCTCTGATGGCAGCTTATTTAAAACTCAGTGTGCTCCTTCACCTATACAAAAGCAAAGACACCCTACTGTGAAACGTGTTACTTTACCTGCAAGTGTTGAAACAGATTCATCAAGTGACTCTTCTATAGAACCAAGGCCTCTGACTTTAAAGGctatttttgaaagatttaaaaaaaagaaacggaaaaagaggaaaaagagaaaatatgagcCAAAATTAAGACCAAGAGGAAGACCAAGAGGAAAACCATCGGGAACGAGGATCACTAGAAGGTCGCAAATAGAtgcaaaacaaattaaagacaAAGGAGCTGTGTTTCCATTCTTAGAATCTGAGAGTGGAAGAAAACCTTTACCTTGGAAGAAAATTTTAACATATgagCAAGCtgttgcaagaggattttttcaCCACATTGAAAAACTCAAGTATGAACACCACCTTAAGGAATGCTTGAAGCAAATGCATGCTGGGGAAGATTTAGAAAAGGAAGACCTTGACAGTCGGAGGCACAAATACATGGATGATGATGGTTCACTTTCTCCTATTGAAGAGCCATTAACTGAAGATGAAGCAACAAATCCTCAGGCTGAATGTGATATCAAGTTGGTTGAAGACAGTTGCTTCATAATAAGTTCAGAATTCTCAAGGAAGAGAAACTTGGAACAAGAGAAGATTAAGAAAGAATCTACATTTTCTAAAAAAGCCAAAGatgccacacacagagagaaagggcaCAGAAGAACCTTGAAAGGAAATGAACATGTGACTATTGAAGAAGGTAAAGAACATAGATAACAGTGTATGCCAAGTAGATCAAGAACTAATCTGGGGAAGAAGATAAACTTGCTGGTGGAACGCTAATAAATACTTAGTAAAGCTTTTTTCGTTGCTTGATTTCAGAGTAAGAAATACTATAAGGATTATTTTACTACTATAGTAAACATGATTGTGATTCTGGAAGGAAAATGCTAACAATCCTATACATGTCTAGATTCAAGACCCCAGCCTCGCCCTTTTGCTCATCTGCAGAGCAAGGTCATGAAGAAAGGAGAGTTAGAGTATCTGGAGGTTCACCACCTCTGTGGTCTGTCGCAGCCACTATGActatgaggaggaagagatgatTTGAAAATTGGATTAAACTCCTGGACTCTTATACTAGAAAAAATAAACTAATGATAAAACCCA