Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Vmp1
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name vacuole membrane protein 1
Also known as 3110098I04Rik|4930579A11Rik|Tango5|Tmem49|mir-21a|ni-2
Coordinate chr11:86474684-86574662
Strand -
Gene summary Involved in autophagy and lipoprotein transport. Acts upstream of or within embryo implantation. Located in phagophore assembly site. Orthologous to human VMP1 (vacuole membrane protein 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Vmp1

Retroname Coord Strand Genomic Region ENSG
Vmp1P1 chr5:30036404-30038413 - Intergenic
ENSMUSG00000106551 UCSC

Expression

Transcript Sequences

>NM_029478.6
GAGTTCCGGTTGGCTGGAGCCCAGCGGCGGGTGTGAGAGTCGGTGTTGTGAGCCGCTTCCAGGATCCTGCGATCCGGAGAAGCCGGGGTCTGAGCGGcTCCTCCAGAGTTCCTGATCTATGAAATGGCAGAGAATGGAAAAAATTGTGACCAGAGACGCATAGCAATGAGTAAGGATCAGCACAATGGAAGTCTCACAGACCCCTCTTCAGTTcatgagaagaagagaagggatcgggaagaaagacagaatattGTCCTGTGGAGACAGCCACTCATTACCTTGCAGTATTTCTCTCTGGAAACTCTTGTAGTTTTGAAGGAATGGACCTCAAAattgtgGCATCGTCAAAGCATTGTGGTGTCCTTTTTACTGCTGCTTGCTGCGCTTGTAGCTACGTATTATGTGGAAGGAGCGCACCAACAGTATGTGCAGCGGATAGAGAAGCAGTTTCTTTTGTATGCATACTGGATAGGCCTGGGGATTTTGTCCTCTGTTGGTCTTGGAACAGGACTGCACACCTTTCTGCTTTATCTGGGCCCACATATAGCTTCAGTTACATTAGCTGCTTATGAATGCAATTCGGTGAATTTCCCTGAGCCACCCTATCCTGACCAGATTATCTGCCCAGAGGAAGAAGGCGCTGAGGGAGCCATTTCTTTGTGGAGTATCATCTCAAAAGTTAGAATTGAAGCCTGCATGTGGGGCATTGGAACAGCCATTGGAGAGCTGCCTCCATATTTCATGGCCAGGGCAGCTCGCCTCTCAGGTGCTGAACCAGATGATGAAGAGTATCAGGAATTTGAAGAAATGCTGGAACATGCAGAGGCTGCACAAGACTTTGCATCACGGGCTAAACTGGCAGTTCAAAAACTAGTACAGAAAGTTGGATTTTTTGGAATTTTGGCCTGTGCTTCTATTCCAAACCCCCTGTTTGACCTGGCTGGAATAACGTGTGGGCACTTCCTTGTACCTTTCTGGACCTTCTTTGGTGCAACCCTGATTGGGAAAGCAATCATTAAAATGCATATCCAGaaaatattTGTTATAGTAACTTTCAGCAAGCACATCGTGGAGCAGATGGTGACTTTCATTGGTGCTGTCCCCGGCATAGGTCCGTCTCTGCAGAAGCCTTTTCAAGAGTACCTGGAGGCGCAGCGGCAGAAGCTTCATCACAGAAGTGAAGCGGGCACACCGCAGGGAGAAAACTGGTTATCCTGGATGTTTGAGAAGCTGGTGGTTGCAATGGTGTGTTACTTTGTCCTGTCTATTATTAACTCCATGGCACAAAACTATGCCAAACGAATCCAGCAGCGCTTGAACTCAGAGGAGAAAACTAAATAAGCAGAGAGTTTTTATCTGCAGAAGTTAACATGGTGGAGTCCTGCCTTACACTGGGAGGGCTCTAACCAGGAAGGAAGGTCCCCGTTTCCAAcctgtgttgatttttaaaacattcttccTGAAAGCAGTTTAGTCCATATGTTACACTGACATACTTTATTTGTTAAGGTAAGGTGTCTACACCCTCAGTTCAATCCACGTCGTATTCTTTAGGGTGGATGTGATGTTCTGCTGCAAACTTAACAAAAACTGGCCTTCTGATACCTTCACAGGGCCACACAGAACCTTCTGAAGTATGttaaatatgtcaggctttttaGGCTTGTCACAAATGATTGTTTTTTTCTAAGTCACCAAATgtatataagttatatatattggatagcaATCTTGCATGTCTATCATGGAACAATTTAATATGCCTTCCTTTCCCACCCTCAAAAAGGCCATTTTATGACGCATTGCACACCCTCTGGGGAAATTGATCTTTAAATTTTGAAACAGTATAAGGAAAATCTGGTTGGTGTCTCACAAATGAGTACGCCATTTTTTATTCTGTATATTTAGAATGAAGTCGTGAAAAACTTTATAAAGACATCTTTGATCATTCCGAAATTGTGTCCGTTTTCTTTAGTGctatggttttttgtttctttttcacttCTACAAAGCGAGTGGCAGCCTTGCCAATTAGACTTAAACCAGAATTGCCCAGGCTTTTATGTATTGCCTGAGAGAGCTACCTccaaggtgttttgttgttgggcTGGAGATCTAAGCGGGACTATGAGGTTCACCTAGAGTGGGAATCTCTTACTTTATAAAAACAAGAAGTGGTGATGTATAAATCAGAGGACACTAGCAAGAAAGGCTTTTTCATGTTCATGTTAGTTTTAGCTGTTTGTACTCCGGCTTTAACAGGTGGAAGCTTACTTCTCTGTGtgatttctgtgttttatttcaaTGTGATTTTCCTTTGACATTTTTTTGATTGAccctgttcattttgttttgcctgGTAGGAAAATAAACAGCTTTCTTTCCTAGAATTGGCATTAAGCCCCAGCAAACCAGAGatgtttgctttgctttaaaCCCTGCCTGAGCACCTCGTGCTTGCCCCCTGTCGTGGTCGTGACATCGCATGGCTGTACCACCTTGTCGGATAGCTTATCAGACTGATGTTGACTGTTGAATCTCATGGCAACAGCAGTCGATGGGCTGTCTGACATTTTGGTATCTTTCATCTGACCATCCATATCAAATGTTTTCATTCAAACATTACCCAGCATCATGGTTTGCAGTCAAAAATTGTGGTCCTTATGTCTTGTGAGACTTGGAGCCCTTATACCTTGGTACAACAGCAGCAGTATCAAGAGAAAACTTCCTAGGAAATTGGGGTAGTCGTCACAgtcataactaaataaataaaaatgaaaagtcacCTTGC