Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Depdc1a
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name DEP domain containing 1a
Also known as 5830484J08Rik|Depdc1
Coordinate chr3:159201070-159235592
Strand +
Gene summary Predicted to enable GTPase activator activity. Predicted to be involved in negative regulation of transcription, DNA-templated. Predicted to be part of transcription repressor complex. Predicted to be active in nucleus. Orthologous to human DEPDC1 (DEP domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Depdc1a

Retroname Coord Strand Genomic Region ENSG
Depdc1aP1 chr7:57527739-57531057 - Intergenic
ENSMUSG00000109086 UCSC

Expression

Transcript Sequences

>NM_001172092.1
GGCAGTTGTTTCCGACACCAACTCCAGGCCACAGAGGTTCCTGCTACCGCGCACTTTCCGCAGCCTCTCAGCCCGGCAATGATAGCATGGAGCGTCAGGGTGCTCCTCTTGGACCTTACCGGGCCACCAAGCTGTGGAATGAAGTAACCACATCTTTTCGAGTAGGAATGCCTTTAAGAAAACAtagacaacatttaaaaaaatatagcaaTTGTTTCACTGCAGTTGAAGCTATAGATTGGCTTTATGATCTGTTAAGAAGTAATAGTAATTTTGGTCCTGAAGTTACAAGACAACAGACTATTCAACTATTGAGAAAATTTCTTAAGAATCATGTGATTGAAGATATCAAAGGTAGATGGGGATCGGAAAGCCTTGATGACAACAATCAACTATTCAGATTTCCTGCAACTTCTCCACTTAAAACTTTTCCACAAAGACatacagaaatcaagaaaaccaacacAGAGTACTTTTCCAAAGACAAAGATGGTATTTTTAAATTACGAAACTTATCTCAAAAAACTTCTAAGAAGCGTGGATTACATTTCTCTCAgGAAAATACAGAAAAGATAAATCATGAAAGAATAACCAATGAAGATCTAGAAATTGCACCTGACAACCAAGAAATAAGCCAGGAAGATGTTGAAGAAGTTTGGAGATACGTTATTATGATATACCTGCAAACCATTTTAAGTTTGCCATCCATAGAAGAACTCTTAAACCCAAACCAAGTAATTCCTCAATATATAATGTACAACATGGCCAACACAAGTAAGCATGGAGTGGTCATACTACAAGACAAATCAGacgaTCTTCCACATTGGGTTTTATCTGCAATGAAGTGCCTAGCAAATTGGCCAAGAAGTAATGACACCAATAATCTAACTTATGTTGGATTTGAACGTGATGTATTCAAAACAATTGCAGATTATTTTCTAAATCTCCCTGAACCTCTACTTACATTTGAATATTATGAATTATTTGTGAACATTTTGGTTGTTTGTGGCTACATCACAGTTTCAGATAGAACAAGTGGaatacataaaatacaagatGATCCACGATCTTCAAAAATCCATGATTTAAGCAATTTGAATTCCTTCAAATCAACTGAGTGTCTTCTTCTCAGTCTGCTTTACAAAGACAAAAGCAATGAAGAGTTGGATTCTACTAAAAGACTACAAAGAAATGATCAAGGATTTCAAGAAAGATGTGCCAAGAAAATGCAGCTAGATAATTTAAGAAACAGAAGAGCTAGTGCTAATGACATAATGGGAGGAAGCTGTCATAATTTAATAGGCTTAAGTAATACAAATGCCCTGTCCTCTAACATCAAACCAAGGTGCTCTTCTTTGGAAGGAATTGTAGATAGGCCAGTGAATTCAAGTGAAAAGAAGTCCAGTATCTTCTACCAGTCTGTTCTGAACATAGAAGAACAAAATAGTAAGCAATCGTTAGTGTCTGCACCCAAACAGACACCCCTATTTAATCTTCACTCAGATGAAAATGCTCAGCAGCCACACTGTGTTGGTTTTAACAGAACCTCTGCTTTGACTGTTCAAGACCAAGAAGAGTTATGTAATGAAAAGTATAAGTCAAAACAGCTTTGTAGATCTCAGAGTTTACTTTTAAGAAGTAGTACAAGACAGAATAGTTGTATCAATAAACCAGTGGCTGAAattataatgaaaccaaatgttgGACAAGGGAGTACAAGTGAGCTCGGAGAGTCTAGTACCACAATCAATAAAAGACTGTGCAAAAGCACCATAGAACTTTCAGAGAAATCTTTACCTCCAGCTGCTTCTGTGTTGACTGGCACACAAAGTTTGCTGCAACCTCACTTAGAGAGGGTTGCCATCAATGCTCTACAGTTATGTTGTTTGTTACTTCCCCCACCAAATCGTAGAAAGCTTCAACTCTTAATGCGCATGATTTCTAGAATGAGTCAAAATGTTGATATGCCCAAACTTCATGAACAAATAGGTACAAGATCATTGatgataaatACTTTTTCTCGATGTGTACTATGTTGTGCTGAAGAAGTGGATCTTGATGAGCTTCTGGCTTCAAGATTAGTTTCTTTCCTAATGGATCATCATCAGGAAATTCTTCAAGTACCCACTTATTTACAAGCTGCAGTGGAGAAACATCTTGACTACATTAAAAAGGGCAATGTTAAAAATCATGGAGATGGACTAGTTGTTCCTTTGCCAACATATTCTTACTGTAAACAGATTAGTGCTAAAGAATTTGATGAACAGAAAATTTCAACTTCCCAAGCTGCAATTGCAGAACTTTTGGAGAATATTGTCAGAAGTAAAAGCTTGTCtctaaaggagaaaagaagaaaattgaaacagTTTCAGAAGGAATACCCCTTGATATATCAGAAAAGATTTCCAACCACTGAGAGTGAAGCAGCACTTTTTGATGATAAACCTACAATCAAGCAACCGATGCTGAATTTAAGAAACCCCAAGCTTCACAGTCTGCGTTACTGACTTAAAACTTCAACAAATGAAGCCGTACATGAGACTATTTCTACTTAAAAGAACACTGTTGATATTATAGGTTCCCTTCAAAGGACATTATACAAGGAGGTGACAAAACAGTCTTTATCTGTGCGAGGCTGCTAAAGCTACTGGATCTGCCCTAAGTGCCTAACGAAAGGTGATACCAAATATTTTAATCAGaaactattttttaatataatgatCTGGTAAGACTATCAGAATTGTACCATCCAGATAAAATTGTGGtgcttttaaagaagaaaacacgtctgtgtctatatgtatattaGCTAAAGAACTGGTTGTTTAAGATTGCTTCTTTATTTATAAGTATCAGATCATGAAAAATATTGTACACTTTTATATAATCTTTTTACACTTATGGTCTATTTAACTTTATATAAACACACTTGTAGTTTAGCTTTTTTAATTGGACTTTGGTTTATTGGGGGGCAAAAGGAGGTagtttttgagataaagtctctctATGTAACCTATTCTAACCTCAAACTCATATTCCTCCTGCCTTATTCTCTTGAGTAgttggaatatatatgtatgtgccaccattcctggcttatatgtgtgttttaaagatatgtttctgtgagatttttgttttcccctaaacattttcttaattatttcagtcttttttccagaaatatattttgaatccTTACATTCATTATCTATCCTAATACTGAAATAGATATATAATTGTtatttaacaacagaaatttgTCTTTCATTGTTTCTTAAATGTAAAGACCATGATGAATAAAGCAAAAATTCCTGTCttaa