RCPedia: Genes

Summary

Gene Name	Coa5	Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie	Mus musculus
Full Name	cytochrome C oxidase assembly factor 5
Also known as	1700001A24Rik\|6330578E17Rik\|Pet191
Coordinate	chr1:37456166-37469184
Strand	-
Gene summary	Predicted to be involved in mitochondrial cytochrome c oxidase assembly. Located in mitochondrion. Is expressed in heart ventricle; nervous system; and sensory organ. Human ortholog(s) of this gene implicated in fatal infantile cardioencephalomyopathy due to cytochrome c oxidase deficiency 3. Orthologous to human COA5 (cytochrome c oxidase assembly factor 5). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Coa5

Retroname	Coord	Strand	Genomic Region	ENSG
Coa5P1	chrX:163004008-163004574	+	Intragenic	N/A	UCSC

Expression

Transcript Sequences

>NM_198006.4
ACTCCTGGCGGAAGTTGTTGAGACTTTCTCCCACCCTCGCCGGTAGCTTGCCAGTGGGCGTGTCCCACGCCCTTCCGGGCCGTGCGGGGTGACCGAGGGCCGTGATCCAGTGTGGTGAGGGCGGTGGGTCCCCGCCATGCCCCGGTATTATGAGGACAAGCCGGAGGGCGGCGCGTGTGCGGGCGTGAAGGAGGATCTGGGTGCATGTCTGCTGCAGTCTGCCTGTGTGCTCCAGgaaggaaaatccCCACGGCAGTGTTTGAAGGAAGGCAACTGTAGAGCTTTGCAGTATTCCTTTTTTGAATGTAAAAGATCAATGCTGGATGCCAGATCAAGattcagagggagaaaaggatATTGATAACATGCTGAACGCAAGATGAAAGTCACCCAGGATTTTCCATGGTCCTTAACAGAAAGGAACCAAACGGGAAGCACAGCAGCTGCCGCATCTCTTCCACCTCTGGGCCAGGTGTTCCTCCCAAGGACACCAGAGAAAATGGATCAGTGCTGTTTCTGAATGAGTCTGCTGGCTGAAGTCATTTATAGAAGATCCATGGGACTAAACAACTATGGGCTAAGAATGTGTCTGGGGAATTACCTAATGAAGAGATTATGTTCAAGGATGACTCTTCGATCAGATTACACAGTGTGTGAATTCAGGAGGCCATGATGAGATTGGCATAGATAGTGGCTCCTCCAactcttttttctgtttcttggttTCAATTTTAGGCCAACCCCCTCCTCATAAAGGGGTGAAATCAGCCATAGACCACATCCTCAAGATATGGGTGGGCTCCAAAAAGGAGAGCATAGGCTGGCCCACAAGTCACACCCTGCTGAAGGACGCTGCTCCTTCCTGGGTCATATGCTTGGTGATCTTGGCTAGATCCTGGTCGCATGTACTGTGCTGACACCATGCACAATCACATAAGATAAGTTATGGGCCTCATCCCTAAACACTGGAATGCAGCAAATGGACACAACAGATGTTCACTCTAGATAACAAATGTCAATGACATGAAGTGGCTGGAAAAGTTTAGAATCCTTAACATATTATTTTGACCACTTAACACAGTAGAAAGCCATCAGGGCACTAAATCTTCAGTGTGATTCTTGCCATTGAACAGAgtggcaattctatattgttctGTAGTTCACTGGGGCTAAAGCAGTCAAGGACTGGAAGTTCACTtgctattttaaaagtttttgaagCTATGAGGATTCCCTAGGGTGTCACTGAGGTCTGCTCTATGTACTGCCCCCACTGGGAGTAGGAGGTACTGCACCCTTGTGCTCTGTGTACTGCCCCCACTGGGAGTAGGAGGTACTGCACCCTTGTGCTCTGTGTACTGCCCCCACTGGGAGTGGGAGTATTGCACCCTTCAGTCCTGCCACCTATGTCCCAAGCTTGGTGTCTGTGTGCAGTGTGGAGGAGTGCACATTCTGCATGCTAGGAAGCTCGACCATTGAGCCACACCTTCCACTAGTGCTTCAGTTTCAACAGAGAGTGAAATGTGTTTGTATGAAATGCCTCCATTTGAGTAGATAGAGCTTTATTTGGAAAAAGTCACATGTCTCATAATTGGACTTTGACTTAGACAACCCCATGGAGTTTAGAGTGTTCGTGGAGCATGCTGCAGTCACCACTATCTACTTCCAGAACAGTCTCATCCTTTCCAGAAATGTAACCACTGGTCAGCACTCTGCCCTCTCCCTCTGGTCCAGGTCTATTAGATGAGTGGAACTATGTAGTCCTGTCTTTTCTGAGTCCTGTTACCAAATTCGACAGGTTTATTGGCATGTAGCATCAGTCTGCAGTGTAGTTCTGCTGAGTAGCATCCACAGTAGACAGACACTGTGTATTTCTCCATCGAGCAGATGAGCTCTGAGCTGTTTCTACTTTGGGGCTTTTGACTAATGCTATGAACGTTTCATTTAATACATGCCTTAGAGTTGAACTCCAAGGTCGTATCATGACGGCCTCAATTATATTTTCTACAGTGATTTTACCACATTTCATGCTGTCATGGGATCTAGGCTCCAGCACCCCTGACTTTCACAACTGCTCATATTGCTGACAGCCATTCTGCTTGTGATAAAGAGGCATCTATTGGGATCTTGGTTGCATTTCTCTAGTGTCTAATAACCTGAGCAGTTTTTCGTGTGTTCATTGGCTCTCTATGCTGCCTTTGCAGAGTGTTTTCTAGTCTGCAGTCTGGCTTCCAGTTGGGTTATCTGTTTATTTTCCTATAAGATTTTTTATTTACTGTTGGCTCAAGTCTCTTAAAGATTAATTGGCATTTTTTTCTCAACGTGTTTGTCCTTTTCAATCTCTTGCTACTCTATATAGCACagtctttatttttatacattcccTTATGTggcttagcccaggctggccgggAATCCCCAAAGCGCGAGCATTTTCAGCGCTGCACTTCCCAGAAAGCACACACCGCTGCTCTTGACTAGAGCAGTTTTCATATTGGAAAATGacaatgtcttttttctttcactcTAAGAAACCATTCCTAACCCAAACTTCCAGAAGCTTATAAATTTTACCTCTTACCTGTAGGCCTGTGCTCTCAAAATTATTTTACACACCTTTATTCATGACCATATTTGAAATTAGTTAAatagaaataatacattttagtATGGCTAAGTATGTAGCTCCGTATATATTGTGTTCAGCACATTCACAGTGCAGTACAGTACAGTCTGCCTGCCGCACTGTTCTGCATCCACCTCAGGAAATGCAAGTGTGCCCATCTGAGGACTCCCAGCCACTGCCAGGTCGCCCGCCCTGCCCTGTCCTTGGCATACTCTCTCCTCATGGTAACCACCATTCTCTTTCCTGTTTCTGAATTTGAGTACCCTAAGTGCCTGGTATATGTGGACTCTTTGTTGTgtgcatgcacttgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagagagtgtgtgtgtgtgtgtgtgtgcctccagCGCGGAATACCATGAAGGTTCATATCATATATCGGTTTCCTTCCTTTGTAAGGACAAATGGTATTGTAGTATATGTTGTATGCATATTGTATGTATCTTGTTACCTACTCATCCAGCCGTGGGTACCTCGGTTGTTCCCACCCTGGAGCTCCTGACTATGCTGTGAACGTGTATATACAAATACCCCTAGGACCCGCTTTCAGTCTTAACATACATGTAGCAGATTGTATGTCATAGGGTACTTCTGTTTTTATTAGTAGGCATTGCCATAGTTTCCATATCAGCCACACTATTCTATGTTCTGTCCGCAGTGCACAGAGATTAGAACTGCCTATGTCCTTGTGACTTGTATGCCATTCTAGAAGTCGTTAAGATCCACCAGTGCTTCTGCTTCCTAGTTCCCTGACTGCTGGTGTGTTCTAGATGCTTGGTGGCTTTCTTTATATAGCGTTTGAAGAAATTGTTTTAGGTCTCCTCTGCCCGTTAATAGTTgactctggttgaatttttggtCATCACATCTACAAAAGCATTGATTCCAAGGGAGCTGACTGTAGCTTGCCCTGGGAATTTTAGTTTTAGTTCTTAGCTTTGCCCTTTGATGCATTTTGAGTTAATCTTTGTGTGTGGTGGAAGCTCTGACTTTCTACTCTCCACATGTGCATATCTAGCTTTGCACAATGCCCTTTGGAGGGAAAACATGGCGCCATGCATGGTGGGGCCGGTTTTGAGCCCAGTCTCTCctgactctgtctgccttcatgcCAACGCCACTGCTTTGATTACTGGAGAATTACTATCAAAATTTGAAATCAGAAAGTGtttgttctaaaataaaaatttgaatctGAAAACAT