Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Pcnp
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name PEST proteolytic signal containing nuclear protein
Also known as 1110018D06Rik
Coordinate chr16:55835870-55851590
Strand -
Gene summary Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein ubiquitination. Predicted to be located in nuclear body. Predicted to be active in nucleus. Is expressed in embryo. Orthologous to human PCNP (PEST proteolytic signal containing nuclear protein). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pcnp

Retroname Coord Strand Genomic Region ENSG
PcnpP1 chr4:22276117-22277407 + Intergenic
 ENSMUSG00000083376 UCSC
PcnpP3 chr6:48499326-48502064 - Intergenic
 ENSMUSG00000044211 UCSC
PcnpP2 chr4:33278615-33278780 + Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001024622.2
GGGGCCGTGACGTTCTTGCCCGGGCTGCAGGGGGAGGCCGCGGCGAGGAAGATGGCGGACGGGAAGGCGGGAGAGGAGAAGCCAGAGAAGCCGCAGCGAGCCGGAGCCGCCGGAGGACctgaagaagaagcagaaaaacCTGTGAAAACTAAGACTGTTTCTTCCAGTAATGGAGGGGAAAGTTCCAGTCGCAGCGCTGAAAAGCGATCAGCTGAAGACGAAGCTGCAGACCTCCCAACAAAGCCTACAAAGATGTCCAAGTTTGGATTTGCCATAGGTAGTCAGACGGCACGGAAAGCGTCCGCCATCTCCATTAGACTCGGAGCAAGTAAGCCTAAGGAAACAGTTCCAACTCTTGCTCCAAAAACTCTGTCGGTAGCAGCAGCTTTCAATGAAGATGAAGATAGTGAGCCAGAAGAAATGCCTCCAGAAGCAAAGATGAGGATGAAGAACATTGGAAGGGACACACCAACATCAGCGGGACCAAACTCCTTTAATAAAGGGAAGCATGGCTTTTCCGATAACCAGAAGCTGTGGGAGCGAAATATAAAATCTCATCTTGGAAACGTCCACGACCAAGACAATTAAGTGAAGTGTCTGAGactggggtgtgggtgggtgcagTTAGAAGGAGCAGTCTCCTTTTTGTAAAGAATGGTGTAAGACTAGCTTTGGAGccgtttttctttcttctttttttcttttccttttttctttttttttttttttttttaagattgagtGGTACACTAATAAATGAGAGTTTGCAATTAGAGgtaatttatgttttatatacagATTTCAAGACATTTGCTAATTTTGTAGTTTCACATGATTAGTTTCCAAGGGTTAcagataataaagaaatcacaagtggTACCTTTCTAAGAATTGCATATTTTTTTAGACACAACTATTAGCACATTAAGAGGGAAGCCAAAAGTTATTGTCTGCTTCAAACTGGAAGCAGTTCCTCTCCTGACTTCTCCCTCGTTACCCGACTGTCCGGCTCCCTGCAGCAGCCTTACCGAGAGGGAGATTGGCTTGAGAAGCCAGTGTTACTGTTGTGACTGTTGGCTGAGAGGAAGTTTAGATGAGGttcaagtaaaccctttcctgcgGGCATTTCGTTTTGTTTCGGGCCATTCTAGCTAGTACTGCTTCGCTCTCAGTGGGTACCGATGCTTGCtctgtaaaaataaatttttttcgtTAAAAATTCTTATATGAAGAATTGAGTATTATGACTAGCCCACTCTAACGGAGTGTGTCTCCGTTGAGGACCTTCAGAGGACACTATTTGCTACCAAAGTGAACCAGTATTCTGAATGTGcttctcttggtttctgttctAGTTCCTAGAAGCATTTCCACCAGAACTTGAGGCAAAACATAAGGAAGCTGTTTCTTTTAAAGTACAAACACCACCAAAAATATCAGTGTACATAGTGCTTTATGTATTTggctggcttttattttttaaaaggtttaaataacaaaaaaggaaaaaaaggtatAGCATTGTATGAAGGCAGATGAGGCGACACACCTGTGACATTTGAAGCATTTGTGTTACTAACTTACTAGATCCGGTTTGAATTGAATTCACAAGGTTTCTTACTTGTCCAACTCCAGGCTTATTTTACGTACATACAACCTGACCAGTGGTTTCAAAAGCACATTTAGTGACTGCAATAGGACAGAAATGCTTCTCTAGACACATCTTCATTGCGAGCGTCTCATCGCATATGCTCTTAGAGTTCTGAATGTAggatgtttgttttgtatttttgtattgtATATGGGCTTTTTAAATGTGACAGTTAAATGCATCTTTAATAGTCACAGACAAAAGAGATGATAAAATGTCCTTTGAAAATGGCAATGTTGAGTTTGGAGGCAGCTTCGGGGAGTTTCCTGGGTGGCGATGATTCACTGGGCAGTTTTTAATGTAGTGACTTCAAGAAGCAGCCTGCGGATATTCCTAACACTTGGTTCACTACAGTTTAGTTTACTTCATAAGCCCCAAGTAAAACGATGGAAATGTACATAGCACTATTAGTTCATACATGATTTAAGTATATCAAGATACATAAATTTAACATTTATGTCTGCAAACTGTCCATTTGTCCATTTTACTGTTTGTTGAAATAACACCTCTCCTACATATTCTTTACTTGACTCGAATAACAAATTAACCTGACGTCAAGATGGAGAGAGACGACTGAGCTGAATGTCTTTACTAAAATTACAATAAATTTTGTCAAACTT
>NM_001356448.1
GGGGCCGTGACGTTCTTGCCCGGGCTGCAGGGGGAGGCCGCGGCGAGGAAGATGGCGGACGGGAAGGCGGGAGAGGAGAAGCCAGAGAAGCCGCAGCGAGCCGGAGCCGCCGGAGTTAATTCATGGGAGCCTCTTGTACTGCCACACAATCTCAGTTCCTGCTGTACACTCTAGCAAGCAGTGAAGAGACTGTTGGGTCAGTAGGTGACAGCTGCAGAGGTATCTTCTTGTAAAGATGCTTTTTGAGGTTGCTGCTCCCATCAATCTGCTCAGTAAAAATAGCTCATCTTGTAATGGAGGGGAAAGTTCCAGTCGCAGCGCTGAAAAGCGATCAGCTGAAGACGAAGCTGCAGACCTCCCAACAAAGCCTACAAAGATGTCCAAGTTTGGATTTGCCATAGGTAGTCAGACGGCACGGAAAGCGTCCGCCATCTCCATTAGACTCGGAGCAAGTAAGCCTAAGGAAACAGTTCCAACTCTTGCTCCAAAAACTCTGTCGGTAGCAGCAGCTTTCAATGAAGATGAAGATAGTGAGCCAGAAGAAATGCCTCCAGAAGCAAAGATGAGGATGAAGAACATTGGAAGGGACACACCAACATCAGCGGGACCAAACTCCTTTAATAAAGGGAAGCATGGCTTTTCCGATAACCAGAAGCTGTGGGAGCGAAATATAAAATCTCATCTTGGAAACGTCCACGACCAAGACAATTAAGTGAAGTGTCTGAGactggggtgtgggtgggtgcagTTAGAAGGAGCAGTCTCCTTTTTGTAAAGAATGGTGTAAGACTAGCTTTGGAGccgtttttctttcttctttttttcttttccttttttctttttttttttttttttttaagattgagtGGTACACTAATAAATGAGAGTTTGCAATTAGAGgtaatttatgttttatatacagATTTCAAGACATTTGCTAATTTTGTAGTTTCACATGATTAGTTTCCAAGGGTTAcagataataaagaaatcacaagtggTACCTTTCTAAGAATTGCATATTTTTTTAGACACAACTATTAGCACATTAAGAGGGAAGCCAAAAGTTATTGTCTGCTTCAAACTGGAAGCAGTTCCTCTCCTGACTTCTCCCTCGTTACCCGACTGTCCGGCTCCCTGCAGCAGCCTTACCGAGAGGGAGATTGGCTTGAGAAGCCAGTGTTACTGTTGTGACTGTTGGCTGAGAGGAAGTTTAGATGAGGttcaagtaaaccctttcctgcgGGCATTTCGTTTTGTTTCGGGCCATTCTAGCTAGTACTGCTTCGCTCTCAGTGGGTACCGATGCTTGCtctgtaaaaataaatttttttcgtTAAAAATTCTTATATGAAGAATTGAGTATTATGACTAGCCCACTCTAACGGAGTGTGTCTCCGTTGAGGACCTTCAGAGGACACTATTTGCTACCAAAGTGAACCAGTATTCTGAATGTGcttctcttggtttctgttctAGTTCCTAGAAGCATTTCCACCAGAACTTGAGGCAAAACATAAGGAAGCTGTTTCTTTTAAAGTACAAACACCACCAAAAATATCAGTGTACATAGTGCTTTATGTATTTggctggcttttattttttaaaaggtttaaataacaaaaaaggaaaaaaaggtatAGCATTGTATGAAGGCAGATGAGGCGACACACCTGTGACATTTGAAGCATTTGTGTTACTAACTTACTAGATCCGGTTTGAATTGAATTCACAAGGTTTCTTACTTGTCCAACTCCAGGCTTATTTTACGTACATACAACCTGACCAGTGGTTTCAAAAGCACATTTAGTGACTGCAATAGGACAGAAATGCTTCTCTAGACACATCTTCATTGCGAGCGTCTCATCGCATATGCTCTTAGAGTTCTGAATGTAggatgtttgttttgtatttttgtattgtATATGGGCTTTTTAAATGTGACAGTTAAATGCATCTTTAATAGTCACAGACAAAAGAGATGATAAAATGTCCTTTGAAAATGGCAATGTTGAGTTTGGAGGCAGCTTCGGGGAGTTTCCTGGGTGGCGATGATTCACTGGGCAGTTTTTAATGTAGTGACTTCAAGAAGCAGCCTGCGGATATTCCTAACACTTGGTTCACTACAGTTTAGTTTACTTCATAAGCCCCAAGTAAAACGATGGAAATGTACATAGCACTATTAGTTCATACATGATTTAAGTATATCAAGATACATAAATTTAACATTTATGTCTGCAAACTGTCCATTTGTCCATTTTACTGTTTGTTGAAATAACACCTCTCCTACATATTCTTTACTTGACTCGAATAACAAATTAACCTGACGTCAAGATGGAGAGAGACGACTGAGCTGAATGTCTTTACTAAAATTACAATAAATTTTGTCAAACTT