Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Smndc1
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name survival motor neuron domain containing 1
Also known as -
Coordinate chr19:53367645-53379122
Strand -
Gene summary Predicted to enable RNA binding activity. Predicted to be involved in mRNA processing. Predicted to act upstream of or within RNA splicing and apoptotic process. Predicted to be located in cytoplasm. Predicted to be part of spliceosomal complex. Predicted to be active in nucleus. Is expressed in brain ventricular layer; genitourinary system; sensory organ; and thymus primordium. Orthologous to human SMNDC1 (survival motor neuron domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Smndc1

Retroname Coord Strand Genomic Region ENSG
Smndc1P1 chr5:109162979-109164942 - Intergenic
 ENSMUSG00000093545 UCSC

Expression

Transcript Sequences

>NM_172429.3
GAGTCCGTAGGTCTCGCGAGATCTCGCTCgccttgtctctctctcctcctgcccgAGGCcggcttctctcccctccccctcgctGGCGGACTTTCTCCTTTTCCGACCGAGGCTCGTCGCGGCGGAAAATCTTTCCCGGCTGCAGCCGCCCCTGACGCcgctcgcctcgcctcgcctcccCGACCCCTGCCCGCCGTCCCGACCCCAGCCCCACCCAAGATGTCAGAGGATCTAGCAAAACAGTTGGCTAGCTACAAAGCTCAACTCCAGCAAGTAGAAGCTGCCCTTTCtggaaatggagaaaatgaagatctattgaaactgaagaaggatTTGCAAgaagTAATAGAACTGACCAAAGACCTTCTGTCAACTCAGCCTTCGGAGACGCTCGCAAGCTCAGACAGTTTTGCTTCTACTCAGCCCACTCATTCATGGAAAGTAGGGGACAAGTGCATGGCCGTGTGGAGTGAAGACGGACAGTGTTACGAAGCGGAGATTGAAGagatagatgaagaaaatggCACCGCTGCAATCACCTTTGCTGTTTATGGCAATGCCGAAGTGACGCCATTGCTGAACCTCAAGCCtgtagaagaaggaaggaaggcgaAAGAGGACAGCGGCAACAAACCCATGTCAAAAAAAGAAATGATCGCCCAGCAGCgtgaatataaaaagaaaaaagctttgAAAAAAGCACAGAGAATAAAAGAGTTGGAGCAGGAGCGAGAGGACCAGAAGGTGAAATGGCAGCAGTTCAACAACAGGGCGTACTCCAAGAACAAGAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGCAAAGTTGGAGTAGGAACTTGTGGAATTGCTGACAAGCCCATGACACAGTATCAAGATACATCCAAGTACAATGTCAGGCATTTGATGCCTCAGTAACCTGAAAAACTGCTGCATTTCATCTCTGCAGGGCTTTACTTTACACTCTCCTTTTTATCCTTGTATTTTTCTAAAGGTAACTGATTGCTTAGATGCTGAGTAAGGAAGATACATTGTTGTCATTGTTTGGCTTTGGTAGAATGAAACTTGAAGACATTTGATAACTGCTCTCATTTAACTTCATTACTACTTACCACAGCTTCCTCAGTGTGTTGAACAAGGCAACTTTTCTAGGTAAGTGCTGCTTAAATCAGCACTTAGATGACTTCTGAACGTCAGGCCCATTGAACTGATGTTGTGTAGACCGTTTCTAAGTCCTAATTTGGAATTTTCAGATGCTTTGCACTTGACATATTCCAACAGTTCATTGGAACATGGAGGCAAAACGCCAGCCTGCTAAAGAGAGCTTCAGTTTTACAACCTGGCCATTGTCCAGACAAGCCCAAGTATAGGTTAATTTATAAACGGCAAAGTttattttgagggtttttttttccttgaattacttatttcctggGCCTATTGACTCACTTTGTAttttttgtcattgagtttgaaatttatattaaaaaaccaaacaaaccatgtTTAGGATGTGCGCCCCTTCTCTGgtgtttatttggtgttttgtattgttttttcctttgttgaCTTCACTTGTAGTGGTACCATTTTTGGGATGTGTACTGTTTCTATGGGAAGACAAAAGCTGATGTACAGCCCTGTGTACAGTGTAGATACTATTTTTGTAAAAATACAAGGCTAAATTAATGAACAAGAGTACTCAGTGTTTCATGATtaaattttcctgtatttcttgtgCATTAATCTGACCATAATTTCCCTGTATATTATGTTCATGTAGCTGagtttgtaatttttattaaCGAGATCAAGTTGCCAGCATTTGTTGGCATAAGTGAAGCACCACAGTTATCCAAGTTGAGTTTAAGCCAAAACAAAGGTAGAAAAAAGGGTCTTCCTGTTAAttggaagaaaataatttttagagtGTGTGTTAATTTCAGTTTTGTATGTTTAACTTTAATaaataaagtgtttttaaaatctcCAGTGTGTTAACAAAGGGGCGGAGCCTTAGACTTGTACACAGAACTACAATGCTAAGGCTGGTAAATGGTTCACAGATCCTTAAGAATTCCTTCATTGGGTATAAGAAATGGAGTCATAAAGGATTAATTAATGGGCATGTATGCGATTATTTGTAAATTAAATTACTTTGTAAATTT