Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Snip1
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name Smad nuclear interacting protein 1
Also known as 2410133M08Rik
Coordinate chr4:124960465-124967836
Strand +
Gene summary Predicted to enable mRNA binding activity. Acts upstream of or within I-kappaB kinase/NF-kappaB signaling and regulation of transcription by RNA polymerase II. Located in nucleus. Is expressed in several structures, including branchial arch; cerebral cortex; gut epithelium; metanephros; and sensory organ. Orthologous to human SNIP1 (Smad nuclear interacting protein 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snip1

Retroname Coord Strand Genomic Region ENSG
Snip1P2 chr10:32245548-32246289 - Intragenic
 ENSMUSG00000112511 UCSC
Snip1P3 chr11:106863040-106863954 + Intragenic
 ENSMUSG00000086481 UCSC
Snip1P4 chr12:59363826-59364832 - Intergenic
 ENSMUSG00000112583 UCSC
Snip1P1 chr7:73335197-73336194 - Intergenic
 ENSMUSG00000108337 UCSC

Expression

Transcript Sequences

>NM_001356560.1
GGAAGTGCAAAGCTGTCCGTCACTTCCTACGGCTCAAGTGGCTCAACGGACCGTGCAAGTGACTCTCGGTCGGGCCGCAGGATGAAGGCGGGGAAAAGCGAGCGGGAGCGGAGCGGCCGGCGGCGACACCGGTCAGGCGACGCTCTGACGACCGTGGTGGTGAAACAGGAGCGTCTGAGCCCCGAACCCGTCGCGCACCGCCGGCCCGACGCTCCAGCCGCTAGCCTGTCCCCGCCCGCCGCCGAGCCTGGCCACTCGGGTCACCGCGGGAGCCGAGCCCGTAGGTGAGCCTGATCCTGGAAGCTAACTTACTTTCGGGAAGGAACTTTGAGGTAAAAAATCCTGTGTACCATTCTCTGTAAAGGTCCCCAGCCAAGAAGAAAAGCAAGTCCTCTGGGAGAAGAAGCAAGTCACCACGGACCAAGAGAAGCCAGAGTCCCCACTACCCCATGGTCAAAGTGAAgcagGAACGTGAGGACCATCCTCGGAGAGGACGAGAGGATCGGCAGCACCGGGAACCATCAGAACAGGAGCACAGGAGAGCTCGGAACAGTGAGCGAGACCGGCACCGGGGCCATTCCCGCCAAGGGAGGAGCTCTGATGAGAGGCCCGTCAGTGGACAGGATCGGGATAGAGACAGCCAGAACCTGCAGgcccaggaagaagagagggacttTCATAATGCCAGGCGCCGGGAGCACCGCCAGCAGAATGAAAGTGCTGGCAGTGAGGCTCAGGAGGTGATCCCTCGTCCTGCTGGGAACAGAAGCAAAGAGGTGCCCGTTAAAGAGAAACCAAGCTTTGAACTTTCTGGGGCACTTCTTGAGGACACCAATACCTTCCGGGGTGTGGTTATTAAATACAGTGAGCCCCCAGAAGCCCGGATCCCCAAAAAACGGTGGCGCCTCTACCCCTTTAAAAATGATGAGGTACTTCCAGTCATGTACATCCATCGGCAGAGTGCATACCTTCTGGGTAGACATCGACGCATCGCAGACATTCCCATCGACCATCCCTCTTGCTCAAAGCAACATGCAGTCTTCCAGTACCGGCTTGTGGAGTACACCCGTGCTGACGGCACGGTTGGTCGGAGGGTGAAGCCCTACATTATCGACCTTGGCTCAGGCAATGGAACATTCTTGAACAACAAGCGTATTGAGCCACAGAGATATTatgaactgaaagaaaaagacGTACTTAAATTTGGGTTCAGTAGCAGAGAATATGTCTTGCTTCATGAGTCTTCAGACACCTCTGAACTTGACaggaaggaagatgaagatgatgaggaggaagaaatggTATCTGACAGCTAGCAGCTGAGAGGCAGCCTCTACTGTTAGAAACCGTCCCTACCGGAGGCTGTGGTGGTCACTCCAGCGCCTCTTCTTGCCTTAAGTCTTTTCTCTGTTGCTGCCCAGCCTATGTTGCAGTATGAGAACTGTCACTTCATGTTTTCTTGAAGTTGGCACAGCAGCTGCCTGCTTGTGGGCCCTTGTTTTCTGAACAGTCTCACCAATTACAGCATGTCGAGTCTGGTCAGAGCGTGTGGTGGGCACCTTCAGAACTGCTGCATAGCAAACTGCCCTTGGAAAGGGGATGGTGGCTTCTTCTCTTTGTACAGTTTCCTATTTATATAGCTGTTGAGCTTTGTGGACCAGGAGTTTTGTTTTGGGGACAAATCCTAGAGTAGAGAATCTTAGTCAGCTTTGGTTGTCACCAAAACAGCCTCCAGCCTATACCAAAGCTTTGACCTGATTCAGCTCTTGAGTCATAGAAGTTGATTTTGCACTTCGTTTTGGGGGTGACAGTTTACCACGTGACTTCTCTATTGGCTGTCTTCGATAAACAGACACTCTGTGCGATGTCTGTGTGACAAGACTGTAGGGAGGTCGTGGCTTCTACCAACAGGAGCTGCTGTCATACTGTGCACTGGTCTGTAGATCTGCACCCTGAGGATTCCTGATTTCTTCATGAAGCAGACATCATAGTTTGATCATCTGGTCTTTTTCTTTAGCTTTGAATTTTTATTCAAATGTCgcctctcttctccctttgagAAACACCACACTGACTTTGTAGGAGGGGCCTTGCTGTGGCCtagggatgtgtgtatgtgtctaaacGAGGTTGTGTAGCTTCCACACTTCCAGTTCATCTTTGACCATGTGTTCATATTTTCCTCCCACGGGTGGAAAGTAAGAGACAGCCGAGTGTCTGAACTTCCCACCTGGGATCTGTGAGTAGAAAGATACTCCTTACTGACAGTCTGTGTGCTTCAGAGCTATGTGCTGGGTTTCATATGTCAGTGTTTTGCGATATAAATAATACCACATGATAGGCAAAGGCCTGTCTGCATTTGGAGAGCAGGttttcatttatatgtatttttgagattaaaaaaataaaatttgtaaatataGCCTCAT
>NM_175246.5
GGAAGTGCAAAGCTGTCCGTCACTTCCTACGGCTCAAGTGGCTCAACGGACCGTGCAAGTGACTCTCGGTCGGGCCGCAGGATGAAGGCGGGGAAAAGCGAGCGGGAGCGGAGCGGCCGGCGGCGACACCGGTCAGGCGACGCTCTGACGACCGTGGTGGTGAAACAGGAGCGTCTGAGCCCCGAACCCGTCGCGCACCGCCGGCCCGACGCTCCAGCCGCTAGCCTGTCCCCGCCCGCCGCCGAGCCTGGCCACTCGGGTCACCGCGGGAGCCGAGCCCGGTCCCCAGCCAAGAAGAAAAGCAAGTCCTCTGGGAGAAGAAGCAAGTCACCACGGACCAAGAGAAGCCAGAGTCCCCACTACCCCATGGTCAAAGTGAAgcagGAACGTGAGGACCATCCTCGGAGAGGACGAGAGGATCGGCAGCACCGGGAACCATCAGAACAGGAGCACAGGAGAGCTCGGAACAGTGAGCGAGACCGGCACCGGGGCCATTCCCGCCAAGGGAGGAGCTCTGATGAGAGGCCCGTCAGTGGACAGGATCGGGATAGAGACAGCCAGAACCTGCAGgcccaggaagaagagagggacttTCATAATGCCAGGCGCCGGGAGCACCGCCAGCAGAATGAAAGTGCTGGCAGTGAGGCTCAGGAGGTGATCCCTCGTCCTGCTGGGAACAGAAGCAAAGAGGTGCCCGTTAAAGAGAAACCAAGCTTTGAACTTTCTGGGGCACTTCTTGAGGACACCAATACCTTCCGGGGTGTGGTTATTAAATACAGTGAGCCCCCAGAAGCCCGGATCCCCAAAAAACGGTGGCGCCTCTACCCCTTTAAAAATGATGAGGTACTTCCAGTCATGTACATCCATCGGCAGAGTGCATACCTTCTGGGTAGACATCGACGCATCGCAGACATTCCCATCGACCATCCCTCTTGCTCAAAGCAACATGCAGTCTTCCAGTACCGGCTTGTGGAGTACACCCGTGCTGACGGCACGGTTGGTCGGAGGGTGAAGCCCTACATTATCGACCTTGGCTCAGGCAATGGAACATTCTTGAACAACAAGCGTATTGAGCCACAGAGATATTatgaactgaaagaaaaagacGTACTTAAATTTGGGTTCAGTAGCAGAGAATATGTCTTGCTTCATGAGTCTTCAGACACCTCTGAACTTGACaggaaggaagatgaagatgatgaggaggaagaaatggTATCTGACAGCTAGCAGCTGAGAGGCAGCCTCTACTGTTAGAAACCGTCCCTACCGGAGGCTGTGGTGGTCACTCCAGCGCCTCTTCTTGCCTTAAGTCTTTTCTCTGTTGCTGCCCAGCCTATGTTGCAGTATGAGAACTGTCACTTCATGTTTTCTTGAAGTTGGCACAGCAGCTGCCTGCTTGTGGGCCCTTGTTTTCTGAACAGTCTCACCAATTACAGCATGTCGAGTCTGGTCAGAGCGTGTGGTGGGCACCTTCAGAACTGCTGCATAGCAAACTGCCCTTGGAAAGGGGATGGTGGCTTCTTCTCTTTGTACAGTTTCCTATTTATATAGCTGTTGAGCTTTGTGGACCAGGAGTTTTGTTTTGGGGACAAATCCTAGAGTAGAGAATCTTAGTCAGCTTTGGTTGTCACCAAAACAGCCTCCAGCCTATACCAAAGCTTTGACCTGATTCAGCTCTTGAGTCATAGAAGTTGATTTTGCACTTCGTTTTGGGGGTGACAGTTTACCACGTGACTTCTCTATTGGCTGTCTTCGATAAACAGACACTCTGTGCGATGTCTGTGTGACAAGACTGTAGGGAGGTCGTGGCTTCTACCAACAGGAGCTGCTGTCATACTGTGCACTGGTCTGTAGATCTGCACCCTGAGGATTCCTGATTTCTTCATGAAGCAGACATCATAGTTTGATCATCTGGTCTTTTTCTTTAGCTTTGAATTTTTATTCAAATGTCgcctctcttctccctttgagAAACACCACACTGACTTTGTAGGAGGGGCCTTGCTGTGGCCtagggatgtgtgtatgtgtctaaacGAGGTTGTGTAGCTTCCACACTTCCAGTTCATCTTTGACCATGTGTTCATATTTTCCTCCCACGGGTGGAAAGTAAGAGACAGCCGAGTGTCTGAACTTCCCACCTGGGATCTGTGAGTAGAAAGATACTCCTTACTGACAGTCTGTGTGCTTCAGAGCTATGTGCTGGGTTTCATATGTCAGTGTTTTGCGATATAAATAATACCACATGATAGGCAAAGGCCTGTCTGCATTTGGAGAGCAGGttttcatttatatgtatttttgagattaaaaaaataaaatttgtaaatataGCCTCAT